RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 CLTCL1P53675 1640 aa21.81■■□□□ 1.08
PCDHGA11-202ENST00000518882 ZNF521Q96K83 1311 aa21.8■■□□□ 1.08
PCDHGA11-202ENST00000518882 SCAF11Q99590 1463 aaKnown RBP21.79■■□□□ 1.08
PCDHGA11-202ENST00000518882 WDR43Q15061 677 aaKnown RBP eCLIP21.79■■□□□ 1.08
PCDHGA11-202ENST00000518882 EFCAB2Q5VUJ9 269 aa21.79■■□□□ 1.08
PCDHGA11-202ENST00000518882 KDM2BQ8NHM5 1336 aa21.79■■□□□ 1.08
PCDHGA11-202ENST00000518882 LAS1LQ9Y4W2 734 aaKnown RBP21.78■■□□□ 1.08
PCDHGA11-202ENST00000518882 ASXL1Q8IXJ9 1541 aa21.78■■□□□ 1.08
PCDHGA11-202ENST00000518882 SCAPERQ9BY12 1400 aa21.76■■□□□ 1.07
PCDHGA11-202ENST00000518882 CLASP1Q7Z460 1538 aa21.76■■□□□ 1.07
PCDHGA11-202ENST00000518882 PTPRTO14522 1441 aa21.75■■□□□ 1.07
PCDHGA11-202ENST00000518882 ZFYVE16Q7Z3T8 1539 aa21.75■■□□□ 1.07
PCDHGA11-202ENST00000518882 DEPDC5O75140 1603 aa21.74■■□□□ 1.07
PCDHGA11-202ENST00000518882 PIK3C2GO75747 1445 aa21.74■■□□□ 1.07
PCDHGA11-202ENST00000518882 GOLGA2Q08379 1002 aa21.73■■□□□ 1.07
PCDHGA11-202ENST00000518882 AFAP1Q8N556 730 aa21.73■■□□□ 1.07
PCDHGA11-202ENST00000518882 SPAG9O60271 1321 aaKnown RBP21.72■■□□□ 1.07
PCDHGA11-202ENST00000518882 KDM5AP29375 1690 aaKnown RBP21.72■■□□□ 1.07
PCDHGA11-202ENST00000518882 CDCA8Q53HL2 280 aa21.72■■□□□ 1.07
PCDHGA11-202ENST00000518882 TET3O43151 1660 aa21.71■■□□□ 1.07
PCDHGA11-202ENST00000518882 NEFMP07197 916 aa21.71■■□□□ 1.07
PCDHGA11-202ENST00000518882 CCDC146Q8IYE0 955 aa21.7■■□□□ 1.06
PCDHGA11-202ENST00000518882 SLFN5Q08AF3 891 aa21.69■■□□□ 1.06
PCDHGA11-202ENST00000518882 KIAA1210Q9ULL0 1709 aa21.69■■□□□ 1.06
PCDHGA11-202ENST00000518882 CENPQQ7L2Z9 268 aaPredicted RBP21.69■■□□□ 1.06
PCDHGA11-202ENST00000518882 RTEL1-TNFRSF6BF6WH68 1400 aa21.69■■□□□ 1.06
PCDHGA11-202ENST00000518882 SPINK5Q9NQ38 1064 aaPredicted RBP21.68■■□□□ 1.06
PCDHGA11-202ENST00000518882 NPC1L1Q9UHC9 1359 aa21.68■■□□□ 1.06
PCDHGA11-202ENST00000518882 TRMT2AQ8IZ69 625 aaKnown RBP21.67■■□□□ 1.06
PCDHGA11-202ENST00000518882 STAC3Q96MF2 364 aa21.66■■□□□ 1.06
PCDHGA11-202ENST00000518882 UHRF1BP1LA0JNW5 1464 aa21.66■■□□□ 1.06
PCDHGA11-202ENST00000518882 VWDEQ8N2E2 1590 aa21.65■■□□□ 1.06
PCDHGA11-202ENST00000518882 EIF3AQ14152 1382 aaKnown RBP21.65■■□□□ 1.06
PCDHGA11-202ENST00000518882 ABCA6Q8N139 1617 aa21.64■■□□□ 1.06
PCDHGA11-202ENST00000518882 UGGT1Q9NYU2 1555 aa21.64■■□□□ 1.05
PCDHGA11-202ENST00000518882 APAF1O14727 1248 aa21.64■■□□□ 1.05
PCDHGA11-202ENST00000518882 DDRGK1Q96HY6 314 aa21.64■■□□□ 1.05
PCDHGA11-202ENST00000518882 USP35Q9P2H5 1018 aa21.64■■□□□ 1.05
PCDHGA11-202ENST00000518882 ERVK-7P63135 1459 aa21.64■■□□□ 1.05
PCDHGA11-202ENST00000518882 MAP3K4Q9Y6R4 1608 aa21.63■■□□□ 1.05
PCDHGA11-202ENST00000518882 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.63■■□□□ 1.05
PCDHGA11-202ENST00000518882 INO80Q9ULG1 1556 aaPredicted RBP21.62■■□□□ 1.05
PCDHGA11-202ENST00000518882 PPM1GO15355 546 aaPredicted RBP21.62■■□□□ 1.05
PCDHGA11-202ENST00000518882 C8orf34Q49A92 452 aa21.62■■□□□ 1.05
PCDHGA11-202ENST00000518882 ARAP3Q8WWN8 1544 aa21.62■■□□□ 1.05
PCDHGA11-202ENST00000518882 CFAP70Q5T0N1 1121 aa21.62■■□□□ 1.05
PCDHGA11-202ENST00000518882 NKTRP30414 1462 aaKnown RBP21.62■■□□□ 1.05
PCDHGA11-202ENST00000518882 ATP7AQ04656 1500 aa21.61■■□□□ 1.05
PCDHGA11-202ENST00000518882 CARD14Q9BXL6 1004 aa21.6■■□□□ 1.05
PCDHGA11-202ENST00000518882 BCAR3O75815 825 aa21.6■■□□□ 1.05
PCDHGA11-202ENST00000518882 SLC4A3P48751 1232 aa21.6■■□□□ 1.05
PCDHGA11-202ENST00000518882 DMRT2Q9Y5R5 561 aa21.6■■□□□ 1.05
PCDHGA11-202ENST00000518882 FAM161AQ3B820 660 aa21.59■■□□□ 1.05
PCDHGA11-202ENST00000518882 NEURL4Q96JN8 1562 aa21.59■■□□□ 1.05
PCDHGA11-202ENST00000518882 MROH1Q8NDA8 1641 aa21.59■■□□□ 1.05
PCDHGA11-202ENST00000518882 IFT172Q9UG01 1749 aa21.59■■□□□ 1.05
PCDHGA11-202ENST00000518882 KIF1BO60333 1816 aa21.59■■□□□ 1.05
PCDHGA11-202ENST00000518882 ADGRF5Q8IZF2 1346 aa21.58■■□□□ 1.05
PCDHGA11-202ENST00000518882 KANK1Q14678 1352 aa21.58■■□□□ 1.04
PCDHGA11-202ENST00000518882 MROH2AA6NES4 1674 aa21.57■■□□□ 1.04
PCDHGA11-202ENST00000518882 KIF3BO15066 747 aa21.57■■□□□ 1.04
PCDHGA11-202ENST00000518882 MYOM2P54296 1465 aa21.57■■□□□ 1.04
PCDHGA11-202ENST00000518882 ABCA9Q8IUA7 1624 aa21.56■■□□□ 1.04
PCDHGA11-202ENST00000518882 RGS3P49796 1198 aa21.56■■□□□ 1.04
PCDHGA11-202ENST00000518882 FANCAO15360 1455 aa21.54■■□□□ 1.04
PCDHGA11-202ENST00000518882 E9PSI1 815 aa21.54■■□□□ 1.04
PCDHGA11-202ENST00000518882 MYO3AQ8NEV4 1616 aa21.53■■□□□ 1.04
PCDHGA11-202ENST00000518882 VIRMAQ69YN4 1812 aaKnown RBP21.52■■□□□ 1.04
PCDHGA11-202ENST00000518882 SHPRHQ149N8 1683 aa21.51■■□□□ 1.03
PCDHGA11-202ENST00000518882 EFCAB6Q5THR3 1501 aa21.5■■□□□ 1.03
PCDHGA11-202ENST00000518882 IGHDP01880 384 aa21.5■■□□□ 1.03
PCDHGA11-202ENST00000518882 NFKBIBQ15653 356 aa21.5■■□□□ 1.03
PCDHGA11-202ENST00000518882 IL27Q8NEV9 243 aa21.5■■□□□ 1.03
PCDHGA11-202ENST00000518882 PPRC1Q5VV67 1664 aaKnown RBP21.5■■□□□ 1.03
PCDHGA11-202ENST00000518882 NRXN1Q9ULB1 1477 aa21.48■■□□□ 1.03
PCDHGA11-202ENST00000518882 ADGRL1O94910 1474 aa21.48■■□□□ 1.03
PCDHGA11-202ENST00000518882 POLR3AO14802 1390 aaPredicted RBP21.47■■□□□ 1.03
PCDHGA11-202ENST00000518882 WWC1Q8IX03 1113 aa21.47■■□□□ 1.03
PCDHGA11-202ENST00000518882 SLC24A1O60721 1099 aa21.46■■□□□ 1.03
PCDHGA11-202ENST00000518882 DAXXQ9UER7 740 aaPredicted RBP21.45■■□□□ 1.02
PCDHGA11-202ENST00000518882 ZC3H13Q5T200 1668 aaKnown RBP21.45■■□□□ 1.02
PCDHGA11-202ENST00000518882 SBNO2Q9Y2G9 1366 aa21.45■■□□□ 1.02
PCDHGA11-202ENST00000518882 KIDINS220Q9ULH0 1771 aa21.44■■□□□ 1.02
PCDHGA11-202ENST00000518882 CFAP65Q6ZU64 1925 aaKnown RBP21.44■■□□□ 1.02
PCDHGA11-202ENST00000518882 NGEFQ8N5V2 710 aa21.44■■□□□ 1.02
PCDHGA11-202ENST00000518882 PANK1Q8TE04 598 aa21.44■■□□□ 1.02
PCDHGA11-202ENST00000518882 CENPJQ9HC77 1338 aaPredicted RBP21.44■■□□□ 1.02
PCDHGA11-202ENST00000518882 NOS1P29475 1434 aa21.43■■□□□ 1.02
PCDHGA11-202ENST00000518882 NSD3Q9BZ95 1437 aa21.43■■□□□ 1.02
PCDHGA11-202ENST00000518882 PDE3AQ14432 1141 aa21.43■■□□□ 1.02
PCDHGA11-202ENST00000518882 QRICH2Q9H0J4 1663 aa21.43■■□□□ 1.02
PCDHGA11-202ENST00000518882 CGNL1Q0VF96 1302 aa21.42■■□□□ 1.02
PCDHGA11-202ENST00000518882 COG6Q9Y2V7 657 aa21.42■■□□□ 1.02
PCDHGA11-202ENST00000518882 ADGRB3O60242 1522 aa21.42■■□□□ 1.02
PCDHGA11-202ENST00000518882 TNNT2P45379 298 aaPredicted RBP21.41■■□□□ 1.02
PCDHGA11-202ENST00000518882 SETBP1Q9Y6X0 1596 aa21.41■■□□□ 1.02
PCDHGA11-202ENST00000518882 CLUAP1Q96AJ1 413 aa21.4■■□□□ 1.02
PCDHGA11-202ENST00000518882 USP19O94966 1318 aa21.4■■□□□ 1.02
PCDHGA11-202ENST00000518882 GSE1Q14687 1217 aa21.4■■□□□ 1.02
PCDHGA11-202ENST00000518882 NEUROD2Q15784 382 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9592.5 ms