RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 SETD5Q9C0A6 1442 aa19.95■□□□□ 0.78
VEGFA-219ENST00000518824 TRPM2O94759 1503 aa19.95■□□□□ 0.78
VEGFA-219ENST00000518824 SLC26A8Q96RN1 970 aa19.94■□□□□ 0.78
VEGFA-219ENST00000518824 CPS1P31327 1500 aa19.92■□□□□ 0.78
VEGFA-219ENST00000518824 RAB3GAP2Q9H2M9 1393 aa19.92■□□□□ 0.78
VEGFA-219ENST00000518824 IQSEC2Q5JU85 1478 aa19.92■□□□□ 0.78
VEGFA-219ENST00000518824 MPHOSPH9Q99550 1183 aa19.9■□□□□ 0.78
VEGFA-219ENST00000518824 LRRC7Q96NW7 1537 aa19.89■□□□□ 0.77
VEGFA-219ENST00000518824 PLEKHG1Q9ULL1 1385 aa19.88■□□□□ 0.77
VEGFA-219ENST00000518824 PPP1R15AO75807 674 aaPredicted RBP19.88■□□□□ 0.77
VEGFA-219ENST00000518824 BCANQ96GW7 911 aa19.87■□□□□ 0.77
VEGFA-219ENST00000518824 KIF1BO60333 1816 aa19.87■□□□□ 0.77
VEGFA-219ENST00000518824 XIRP1Q702N8 1843 aaKnown RBP19.86■□□□□ 0.77
VEGFA-219ENST00000518824 ADAMTS13Q76LX8 1427 aa19.85■□□□□ 0.77
VEGFA-219ENST00000518824 UBAP1LF5GYI3 381 aa19.85■□□□□ 0.77
VEGFA-219ENST00000518824 ALKQ9UM73 1620 aa19.84■□□□□ 0.77
VEGFA-219ENST00000518824 ZNF326Q5BKZ1 582 aaKnown RBP19.84■□□□□ 0.77
VEGFA-219ENST00000518824 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.84■□□□□ 0.77
VEGFA-219ENST00000518824 NEXMIFQ5QGS0 1516 aa19.84■□□□□ 0.77
VEGFA-219ENST00000518824 RBM33Q96EV2 1170 aaKnown RBP19.83■□□□□ 0.77
VEGFA-219ENST00000518824 NRXN3Q9Y4C0 1643 aa19.83■□□□□ 0.76
VEGFA-219ENST00000518824 HDGFP51858 240 aaKnown RBP19.82■□□□□ 0.76
VEGFA-219ENST00000518824 KCNA6P17658 529 aa19.81■□□□□ 0.76
VEGFA-219ENST00000518824 CHD2O14647 1828 aaKnown RBP19.81■□□□□ 0.76
VEGFA-219ENST00000518824 NWD1Q149M9 1564 aa19.8■□□□□ 0.76
VEGFA-219ENST00000518824 TBX22Q9Y458 520 aa19.78■□□□□ 0.76
VEGFA-219ENST00000518824 PTPRUQ92729 1446 aa19.76■□□□□ 0.75
VEGFA-219ENST00000518824 SETBP1Q9Y6X0 1596 aa19.76■□□□□ 0.75
VEGFA-219ENST00000518824 TMEM94Q12767 1356 aa19.76■□□□□ 0.75
VEGFA-219ENST00000518824 PIP4K2BP78356 416 aa19.76■□□□□ 0.75
VEGFA-219ENST00000518824 CCDC144AA2RUR9 1427 aa19.76■□□□□ 0.75
VEGFA-219ENST00000518824 PROSER2Q86WR7 435 aaPredicted RBP19.75■□□□□ 0.75
VEGFA-219ENST00000518824 SPATA31E1Q6ZUB1 1445 aa19.75■□□□□ 0.75
VEGFA-219ENST00000518824 PPLO60437 1756 aa19.75■□□□□ 0.75
VEGFA-219ENST00000518824 DIP2AQ14689 1571 aa19.74■□□□□ 0.75
VEGFA-219ENST00000518824 RGL3Q3MIN7 710 aa19.73■□□□□ 0.75
VEGFA-219ENST00000518824 SCAF1Q9H7N4 1312 aaKnown RBP19.73■□□□□ 0.75
VEGFA-219ENST00000518824 NKTRP30414 1462 aaKnown RBP19.73■□□□□ 0.75
VEGFA-219ENST00000518824 METP08581 1390 aa19.72■□□□□ 0.75
VEGFA-219ENST00000518824 TOM1O60784 492 aa19.71■□□□□ 0.75
VEGFA-219ENST00000518824 SETD1AO15047 1707 aaKnown RBP19.71■□□□□ 0.75
VEGFA-219ENST00000518824 HRCP23327 699 aa19.7■□□□□ 0.74
VEGFA-219ENST00000518824 IFT172Q9UG01 1749 aa19.69■□□□□ 0.74
VEGFA-219ENST00000518824 AMOTL2Q9Y2J4 779 aa19.69■□□□□ 0.74
VEGFA-219ENST00000518824 ACIN1Q9UKV3 1341 aaKnown RBP19.69■□□□□ 0.74
VEGFA-219ENST00000518824 ANKRD30BQ9BXX2 1392 aa19.69■□□□□ 0.74
VEGFA-219ENST00000518824 XRN1Q8IZH2 1706 aaKnown RBP19.68■□□□□ 0.74
VEGFA-219ENST00000518824 RPGRIP1LQ68CZ1 1315 aa19.68■□□□□ 0.74
VEGFA-219ENST00000518824 ADGRF5Q8IZF2 1346 aa19.68■□□□□ 0.74
VEGFA-219ENST00000518824 PIK3R4Q99570 1358 aa19.68■□□□□ 0.74
VEGFA-219ENST00000518824 VGFO15240 615 aaPredicted RBP19.66■□□□□ 0.74
VEGFA-219ENST00000518824 HSPA1LP34931 641 aa19.66■□□□□ 0.74
VEGFA-219ENST00000518824 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.59■□□□□ 0.73
VEGFA-219ENST00000518824 MSH6P52701 1360 aa19.59■□□□□ 0.73
VEGFA-219ENST00000518824 ASXL1Q8IXJ9 1541 aa19.59■□□□□ 0.73
VEGFA-219ENST00000518824 C14orf37Q86TY3 774 aa19.57■□□□□ 0.72
VEGFA-219ENST00000518824 PIK3C2GO75747 1445 aa19.57■□□□□ 0.72
VEGFA-219ENST00000518824 ROBO1Q9Y6N7 1651 aa19.56■□□□□ 0.72
VEGFA-219ENST00000518824 ROBO2Q9HCK4 1378 aa19.56■□□□□ 0.72
VEGFA-219ENST00000518824 TMEM132EQ6IEE7 984 aa19.55■□□□□ 0.72
VEGFA-219ENST00000518824 NCOA3Q9Y6Q9 1424 aa19.55■□□□□ 0.72
VEGFA-219ENST00000518824 NALCNQ8IZF0 1738 aa19.54■□□□□ 0.72
VEGFA-219ENST00000518824 NRXN1Q9ULB1 1477 aa19.54■□□□□ 0.72
VEGFA-219ENST00000518824 FAM135BQ49AJ0 1406 aa19.53■□□□□ 0.72
VEGFA-219ENST00000518824 C19orf44Q9H6X5 657 aa19.53■□□□□ 0.72
VEGFA-219ENST00000518824 SLAIN2Q9P270 581 aa19.53■□□□□ 0.72
VEGFA-219ENST00000518824 MYOM2P54296 1465 aa19.53■□□□□ 0.72
VEGFA-219ENST00000518824 CFAP70Q5T0N1 1121 aa19.52■□□□□ 0.72
VEGFA-219ENST00000518824 DHX57Q6P158 1386 aaKnown RBP19.52■□□□□ 0.72
VEGFA-219ENST00000518824 STK26Q9P289 416 aa19.51■□□□□ 0.71
VEGFA-219ENST00000518824 KDM2AQ9Y2K7 1162 aa19.51■□□□□ 0.71
VEGFA-219ENST00000518824 PTCH1Q13635 1447 aa19.51■□□□□ 0.71
VEGFA-219ENST00000518824 C14orf93Q9H972 538 aaKnown RBP19.49■□□□□ 0.71
VEGFA-219ENST00000518824 PRAG1Q86YV5 1406 aa19.49■□□□□ 0.71
VEGFA-219ENST00000518824 ADGRL3Q9HAR2 1447 aa19.49■□□□□ 0.71
VEGFA-219ENST00000518824 ATF3P18847 181 aa19.48■□□□□ 0.71
VEGFA-219ENST00000518824 TRIM26Q12899 539 aaPredicted RBP19.48■□□□□ 0.71
VEGFA-219ENST00000518824 DCAF11Q8TEB1 546 aa19.48■□□□□ 0.71
VEGFA-219ENST00000518824 PLEKHH1Q9ULM0 1364 aa19.47■□□□□ 0.71
VEGFA-219ENST00000518824 CADPS2Q86UW7 1296 aa19.47■□□□□ 0.71
VEGFA-219ENST00000518824 LRPPRCP42704 1394 aaKnown RBP19.46■□□□□ 0.71
VEGFA-219ENST00000518824 MST1RQ04912 1400 aa19.46■□□□□ 0.71
VEGFA-219ENST00000518824 WAPLQ7Z5K2 1190 aa19.46■□□□□ 0.71
VEGFA-219ENST00000518824 YTHDC2Q9H6S0 1430 aaKnown RBP19.45■□□□□ 0.7
VEGFA-219ENST00000518824 SIN3AQ96ST3 1273 aa19.45■□□□□ 0.7
VEGFA-219ENST00000518824 KNDC1Q76NI1 1749 aa19.45■□□□□ 0.7
VEGFA-219ENST00000518824 TECPR2O15040 1411 aa19.44■□□□□ 0.7
VEGFA-219ENST00000518824 DCCP43146 1447 aa19.44■□□□□ 0.7
VEGFA-219ENST00000518824 ABCC11Q96J66 1382 aa19.43■□□□□ 0.7
VEGFA-219ENST00000518824 DISP3Q9P2K9 1392 aa19.43■□□□□ 0.7
VEGFA-219ENST00000518824 PHLPP1O60346 1717 aa19.42■□□□□ 0.7
VEGFA-219ENST00000518824 ADGRB1O14514 1584 aa19.42■□□□□ 0.7
VEGFA-219ENST00000518824 BRINP3Q76B58 766 aa19.42■□□□□ 0.7
VEGFA-219ENST00000518824 LAMC1P11047 1609 aa19.42■□□□□ 0.7
VEGFA-219ENST00000518824 MED1Q15648 1581 aaPredicted RBP19.41■□□□□ 0.7
VEGFA-219ENST00000518824 COL16A1Q07092 1604 aaPredicted RBP19.4■□□□□ 0.7
VEGFA-219ENST00000518824 DDX17Q92841 729 aaKnown RBP19.39■□□□□ 0.69
VEGFA-219ENST00000518824 AHDC1Q5TGY3 1603 aaPredicted RBP19.37■□□□□ 0.69
VEGFA-219ENST00000518824 C1orf167Q5SNV9 1468 aa19.37■□□□□ 0.69
VEGFA-219ENST00000518824 NEUROD1Q13562 356 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms