RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 GPRASP1Q5JY77 1395 aa25.11■■□□□ 1.61
SDC2-202ENST00000518385 SLC52A1Q9NWF4 448 aa25.1■■□□□ 1.61
SDC2-202ENST00000518385 PIK3C2BO00750 1634 aa25.1■■□□□ 1.61
SDC2-202ENST00000518385 ERVK-7P63135 1459 aa25.09■■□□□ 1.61
SDC2-202ENST00000518385 C11orf95C9JLR9 678 aaPredicted RBP25.09■■□□□ 1.61
SDC2-202ENST00000518385 ROCK2O75116 1388 aaKnown RBP25.09■■□□□ 1.61
SDC2-202ENST00000518385 KIF7Q2M1P5 1343 aa25.08■■□□□ 1.61
SDC2-202ENST00000518385 IDI1Q13907 227 aa25.07■■□□□ 1.6
SDC2-202ENST00000518385 ADGRB3O60242 1522 aa25.05■■□□□ 1.6
SDC2-202ENST00000518385 SPATA31D1Q6ZQQ2 1576 aa25.05■■□□□ 1.6
SDC2-202ENST00000518385 MROH2AA6NES4 1674 aa25.04■■□□□ 1.6
SDC2-202ENST00000518385 CHGAP10645 457 aaKnown RBP25.02■■□□□ 1.6
SDC2-202ENST00000518385 RPGRIP1LQ68CZ1 1315 aa25■■□□□ 1.59
SDC2-202ENST00000518385 RBM19Q9Y4C8 960 aaKnown RBP24.99■■□□□ 1.59
SDC2-202ENST00000518385 FER1L4A9Z1Z3 1794 aa24.96■■□□□ 1.59
SDC2-202ENST00000518385 MYOM2P54296 1465 aa24.95■■□□□ 1.59
SDC2-202ENST00000518385 IFT172Q9UG01 1749 aa24.95■■□□□ 1.58
SDC2-202ENST00000518385 ST20-MTHFSA0A0A6YYL1 179 aa24.95■■□□□ 1.58
SDC2-202ENST00000518385 MADDQ8WXG6 1647 aa24.95■■□□□ 1.58
SDC2-202ENST00000518385 FANCIQ9NVI1 1328 aa24.94■■□□□ 1.58
SDC2-202ENST00000518385 TMEM131LA2VDJ0 1609 aa24.94■■□□□ 1.58
SDC2-202ENST00000518385 BCANQ96GW7 911 aa24.93■■□□□ 1.58
SDC2-202ENST00000518385 TNRQ92752 1358 aa24.92■■□□□ 1.58
SDC2-202ENST00000518385 KIAA1210Q9ULL0 1709 aa24.92■■□□□ 1.58
SDC2-202ENST00000518385 CEBPAP49715 358 aaPredicted RBP24.91■■□□□ 1.58
SDC2-202ENST00000518385 PPLO60437 1756 aa24.91■■□□□ 1.58
SDC2-202ENST00000518385 ADGRF5Q8IZF2 1346 aa24.9■■□□□ 1.58
SDC2-202ENST00000518385 NBPF1Q3BBV0 1214 aa24.9■■□□□ 1.58
SDC2-202ENST00000518385 C3P01024 1663 aa24.9■■□□□ 1.58
SDC2-202ENST00000518385 NRXN1Q9ULB1 1477 aa24.9■■□□□ 1.58
SDC2-202ENST00000518385 PRKRIP1Q9H875 184 aaPredicted RBP24.89■■□□□ 1.58
SDC2-202ENST00000518385 STAG3Q9UJ98 1225 aa24.88■■□□□ 1.57
SDC2-202ENST00000518385 ADAMTSL3P82987 1691 aa24.88■■□□□ 1.57
SDC2-202ENST00000518385 MYO5BQ9ULV0 1848 aa24.87■■□□□ 1.57
SDC2-202ENST00000518385 VGFO15240 615 aaPredicted RBP24.87■■□□□ 1.57
SDC2-202ENST00000518385 NEXMIFQ5QGS0 1516 aa24.87■■□□□ 1.57
SDC2-202ENST00000518385 A2ML1A8K2U0 1454 aa24.85■■□□□ 1.57
SDC2-202ENST00000518385 ZFYVE9O95405 1425 aa24.84■■□□□ 1.57
SDC2-202ENST00000518385 SLC24A1O60721 1099 aa24.83■■□□□ 1.57
SDC2-202ENST00000518385 IQGAP1P46940 1657 aa24.81■■□□□ 1.56
SDC2-202ENST00000518385 RIMS1Q86UR5 1692 aaKnown RBP24.81■■□□□ 1.56
SDC2-202ENST00000518385 NLRP1Q9C000 1473 aa24.81■■□□□ 1.56
SDC2-202ENST00000518385 KTN1Q86UP2 1357 aaKnown RBP24.81■■□□□ 1.56
SDC2-202ENST00000518385 SCAF11Q99590 1463 aaKnown RBP24.81■■□□□ 1.56
SDC2-202ENST00000518385 HNRNPUQ00839 825 aaKnown RBP eCLIP24.8■■□□□ 1.56
SDC2-202ENST00000518385 PIK3C2GO75747 1445 aa24.8■■□□□ 1.56
SDC2-202ENST00000518385 KDM5AP29375 1690 aaKnown RBP24.8■■□□□ 1.56
SDC2-202ENST00000518385 CFAP70Q5T0N1 1121 aa24.8■■□□□ 1.56
SDC2-202ENST00000518385 TESK2Q96S53 571 aa24.8■■□□□ 1.56
SDC2-202ENST00000518385 C14orf93Q9H972 538 aaKnown RBP24.79■■□□□ 1.56
SDC2-202ENST00000518385 PPP4R2Q9NY27 417 aa24.79■■□□□ 1.56
SDC2-202ENST00000518385 TMF1P82094 1093 aa24.78■■□□□ 1.56
SDC2-202ENST00000518385 NUTM2DQ5VT03 806 aaPredicted RBP24.78■■□□□ 1.56
SDC2-202ENST00000518385 EIF3AQ14152 1382 aaKnown RBP24.77■■□□□ 1.56
SDC2-202ENST00000518385 PLPPR3Q6T4P5 718 aa24.76■■□□□ 1.55
SDC2-202ENST00000518385 POLR3GLQ9BT43 218 aa24.76■■□□□ 1.55
SDC2-202ENST00000518385 RIMS2Q9UQ26 1411 aa24.75■■□□□ 1.55
SDC2-202ENST00000518385 UBR1Q8IWV7 1749 aa24.74■■□□□ 1.55
SDC2-202ENST00000518385 ZBED9Q6R2W3 1325 aa24.74■■□□□ 1.55
SDC2-202ENST00000518385 CDCA8Q53HL2 280 aa24.74■■□□□ 1.55
SDC2-202ENST00000518385 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.73■■□□□ 1.55
SDC2-202ENST00000518385 HDGFP51858 240 aaKnown RBP24.72■■□□□ 1.55
SDC2-202ENST00000518385 SETBP1Q9Y6X0 1596 aa24.71■■□□□ 1.55
SDC2-202ENST00000518385 TMEM2Q9UHN6 1383 aa24.69■■□□□ 1.54
SDC2-202ENST00000518385 RALBP1Q15311 655 aa24.68■■□□□ 1.54
SDC2-202ENST00000518385 DISP3Q9P2K9 1392 aa24.67■■□□□ 1.54
SDC2-202ENST00000518385 MRS2Q9HD23 443 aa24.66■■□□□ 1.54
SDC2-202ENST00000518385 MYO3AQ8NEV4 1616 aa24.66■■□□□ 1.54
SDC2-202ENST00000518385 ADGRB1O14514 1584 aa24.65■■□□□ 1.54
SDC2-202ENST00000518385 SETD1BQ9UPS6 1966 aaKnown RBP24.65■■□□□ 1.54
SDC2-202ENST00000518385 THEMISQ8N1K5 641 aaPredicted RBP24.65■■□□□ 1.54
SDC2-202ENST00000518385 PTPRMP28827 1452 aa24.65■■□□□ 1.54
SDC2-202ENST00000518385 TMEM132EQ6IEE7 984 aa24.63■■□□□ 1.53
SDC2-202ENST00000518385 SBNO2Q9Y2G9 1366 aa24.61■■□□□ 1.53
SDC2-202ENST00000518385 SLIT1O75093 1534 aa24.61■■□□□ 1.53
SDC2-202ENST00000518385 ALKQ9UM73 1620 aa24.61■■□□□ 1.53
SDC2-202ENST00000518385 ARHGAP23Q9P227 1491 aa24.6■■□□□ 1.53
SDC2-202ENST00000518385 CEP170BQ9Y4F5 1589 aaPredicted RBP24.59■■□□□ 1.53
SDC2-202ENST00000518385 PER1O15534 1290 aaPredicted RBP24.59■■□□□ 1.53
SDC2-202ENST00000518385 ERICH6Q7L0X2 663 aa24.59■■□□□ 1.53
SDC2-202ENST00000518385 LTKP29376 864 aa24.58■■□□□ 1.52
SDC2-202ENST00000518385 TXNDC2Q86VQ3 553 aa24.58■■□□□ 1.52
SDC2-202ENST00000518385 EID1Q9Y6B2 187 aa24.58■■□□□ 1.52
SDC2-202ENST00000518385 CCDC184Q52MB2 194 aa24.57■■□□□ 1.52
SDC2-202ENST00000518385 SENP3Q9H4L4 574 aaPredicted RBP24.57■■□□□ 1.52
SDC2-202ENST00000518385 MYBBP1AQ9BQG0 1328 aaKnown RBP24.57■■□□□ 1.52
SDC2-202ENST00000518385 BRD4O60885 1362 aaPredicted RBP24.57■■□□□ 1.52
SDC2-202ENST00000518385 SMG6Q86US8 1419 aaKnown RBP24.56■■□□□ 1.52
SDC2-202ENST00000518385 BCL11AQ9H165 835 aa24.55■■□□□ 1.52
SDC2-202ENST00000518385 TRAK1Q9UPV9 953 aa24.55■■□□□ 1.52
SDC2-202ENST00000518385 ASXL1Q8IXJ9 1541 aa24.55■■□□□ 1.52
SDC2-202ENST00000518385 PARD3Q8TEW0 1356 aa24.55■■□□□ 1.52
SDC2-202ENST00000518385 ZNF142P52746 1687 aaPredicted RBP24.54■■□□□ 1.52
SDC2-202ENST00000518385 NRXN3Q9Y4C0 1643 aa24.54■■□□□ 1.52
SDC2-202ENST00000518385 PLEKHG1Q9ULL1 1385 aa24.54■■□□□ 1.52
SDC2-202ENST00000518385 PANK3Q9H999 370 aa24.52■■□□□ 1.52
SDC2-202ENST00000518385 SETD1AO15047 1707 aaKnown RBP24.51■■□□□ 1.51
SDC2-202ENST00000518385 MSH5O43196 834 aa24.5■■□□□ 1.51
SDC2-202ENST00000518385 YTHDC2Q9H6S0 1430 aaKnown RBP24.5■■□□□ 1.51
SDC2-202ENST00000518385 CENPJQ9HC77 1338 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms