RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 RIMS2Q9UQ26 1411 aa9.05□□□□□ -0.96
SCARNA18.1-201ENST00000516330 LRRC7Q96NW7 1537 aa9.05□□□□□ -0.96
SCARNA18.1-201ENST00000516330 HDGFP51858 240 aaKnown RBP9.05□□□□□ -0.96
SCARNA18.1-201ENST00000516330 ITGAEP38570 1179 aa9.04□□□□□ -0.96
SCARNA18.1-201ENST00000516330 TXNDC2Q86VQ3 553 aa9.04□□□□□ -0.96
SCARNA18.1-201ENST00000516330 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.04□□□□□ -0.96
SCARNA18.1-201ENST00000516330 NEXMIFQ5QGS0 1516 aa9.04□□□□□ -0.96
SCARNA18.1-201ENST00000516330 CHD2O14647 1828 aaKnown RBP9.03□□□□□ -0.96
SCARNA18.1-201ENST00000516330 NRXN3Q9Y4C0 1643 aa9.03□□□□□ -0.96
SCARNA18.1-201ENST00000516330 LTKP29376 864 aa9.03□□□□□ -0.96
SCARNA18.1-201ENST00000516330 NCOA3Q9Y6Q9 1424 aa9.03□□□□□ -0.96
SCARNA18.1-201ENST00000516330 XIRP1Q702N8 1843 aaKnown RBP9.03□□□□□ -0.96
SCARNA18.1-201ENST00000516330 XRN1Q8IZH2 1706 aaKnown RBP9.02□□□□□ -0.96
SCARNA18.1-201ENST00000516330 ALKQ9UM73 1620 aa9.02□□□□□ -0.96
SCARNA18.1-201ENST00000516330 PPARGC1BQ86YN6 1023 aaKnown RBP9.02□□□□□ -0.97
SCARNA18.1-201ENST00000516330 PRAG1Q86YV5 1406 aa9.02□□□□□ -0.97
SCARNA18.1-201ENST00000516330 ADAMTS13Q76LX8 1427 aa9.01□□□□□ -0.97
SCARNA18.1-201ENST00000516330 IFT172Q9UG01 1749 aa9□□□□□ -0.97
SCARNA18.1-201ENST00000516330 PPLO60437 1756 aa9□□□□□ -0.97
SCARNA18.1-201ENST00000516330 SETD1AO15047 1707 aaKnown RBP9□□□□□ -0.97
SCARNA18.1-201ENST00000516330 CCDC144AA2RUR9 1427 aa8.99□□□□□ -0.97
SCARNA18.1-201ENST00000516330 DCCP43146 1447 aa8.99□□□□□ -0.97
SCARNA18.1-201ENST00000516330 TOM1O60784 492 aa8.99□□□□□ -0.97
SCARNA18.1-201ENST00000516330 PPP1R15AO75807 674 aaPredicted RBP8.99□□□□□ -0.97
SCARNA18.1-201ENST00000516330 LAMC1P11047 1609 aa8.98□□□□□ -0.97
SCARNA18.1-201ENST00000516330 SETD5Q9C0A6 1442 aa8.98□□□□□ -0.97
SCARNA18.1-201ENST00000516330 UBAP1LF5GYI3 381 aa8.97□□□□□ -0.97
SCARNA18.1-201ENST00000516330 KCNA6P17658 529 aa8.97□□□□□ -0.97
SCARNA18.1-201ENST00000516330 SLC4A1APQ9BWU0 796 aaKnown RBP8.97□□□□□ -0.97
SCARNA18.1-201ENST00000516330 TBX22Q9Y458 520 aa8.97□□□□□ -0.97
SCARNA18.1-201ENST00000516330 PTCH1Q13635 1447 aa8.97□□□□□ -0.97
SCARNA18.1-201ENST00000516330 RPGRIP1LQ68CZ1 1315 aa8.96□□□□□ -0.98
SCARNA18.1-201ENST00000516330 KNDC1Q76NI1 1749 aa8.96□□□□□ -0.98
SCARNA18.1-201ENST00000516330 MSH6P52701 1360 aa8.96□□□□□ -0.98
SCARNA18.1-201ENST00000516330 TMEM94Q12767 1356 aa8.96□□□□□ -0.98
SCARNA18.1-201ENST00000516330 MYOM2P54296 1465 aa8.96□□□□□ -0.98
SCARNA18.1-201ENST00000516330 RAB3GAP2Q9H2M9 1393 aa8.95□□□□□ -0.98
SCARNA18.1-201ENST00000516330 SPATA31E1Q6ZUB1 1445 aa8.95□□□□□ -0.98
SCARNA18.1-201ENST00000516330 ROBO1Q9Y6N7 1651 aa8.94□□□□□ -0.98
SCARNA18.1-201ENST00000516330 CHGAP10645 457 aaKnown RBP8.94□□□□□ -0.98
SCARNA18.1-201ENST00000516330 TRIM52Q96A61 297 aa8.94□□□□□ -0.98
SCARNA18.1-201ENST00000516330 ANKRD30BQ9BXX2 1392 aa8.94□□□□□ -0.98
SCARNA18.1-201ENST00000516330 FAM135BQ49AJ0 1406 aa8.94□□□□□ -0.98
SCARNA18.1-201ENST00000516330 HRCP23327 699 aa8.93□□□□□ -0.98
SCARNA18.1-201ENST00000516330 SLC26A8Q96RN1 970 aa8.93□□□□□ -0.98
SCARNA18.1-201ENST00000516330 NALCNQ8IZF0 1738 aa8.92□□□□□ -0.98
SCARNA18.1-201ENST00000516330 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.92□□□□□ -0.98
SCARNA18.1-201ENST00000516330 AHDC1Q5TGY3 1603 aaPredicted RBP8.92□□□□□ -0.98
SCARNA18.1-201ENST00000516330 MED1Q15648 1581 aaPredicted RBP8.92□□□□□ -0.98
SCARNA18.1-201ENST00000516330 PIK3C2GO75747 1445 aa8.92□□□□□ -0.98
SCARNA18.1-201ENST00000516330 CDC42BPGQ6DT37 1551 aa8.91□□□□□ -0.98
SCARNA18.1-201ENST00000516330 NRXN1Q9ULB1 1477 aa8.91□□□□□ -0.98
SCARNA18.1-201ENST00000516330 TECPR2O15040 1411 aa8.91□□□□□ -0.98
SCARNA18.1-201ENST00000516330 ADGRL3Q9HAR2 1447 aa8.91□□□□□ -0.98
SCARNA18.1-201ENST00000516330 VGFO15240 615 aaPredicted RBP8.91□□□□□ -0.98
SCARNA18.1-201ENST00000516330 ZNF326Q5BKZ1 582 aaKnown RBP8.91□□□□□ -0.98
SCARNA18.1-201ENST00000516330 BCANQ96GW7 911 aa8.91□□□□□ -0.98
SCARNA18.1-201ENST00000516330 PTPRUQ92729 1446 aa8.9□□□□□ -0.98
SCARNA18.1-201ENST00000516330 MPHOSPH9Q99550 1183 aa8.9□□□□□ -0.98
SCARNA18.1-201ENST00000516330 PROSER2Q86WR7 435 aaPredicted RBP8.89□□□□□ -0.99
SCARNA18.1-201ENST00000516330 NHSL1Q5SYE7 1610 aa8.89□□□□□ -0.99
SCARNA18.1-201ENST00000516330 ASXL1Q8IXJ9 1541 aa8.89□□□□□ -0.99
SCARNA18.1-201ENST00000516330 COL16A1Q07092 1604 aaPredicted RBP8.88□□□□□ -0.99
SCARNA18.1-201ENST00000516330 SCAF1Q9H7N4 1312 aaKnown RBP8.88□□□□□ -0.99
SCARNA18.1-201ENST00000516330 CADPS2Q86UW7 1296 aa8.88□□□□□ -0.99
SCARNA18.1-201ENST00000516330 PHLPP1O60346 1717 aa8.88□□□□□ -0.99
SCARNA18.1-201ENST00000516330 SHPRHQ149N8 1683 aa8.88□□□□□ -0.99
SCARNA18.1-201ENST00000516330 METP08581 1390 aa8.87□□□□□ -0.99
SCARNA18.1-201ENST00000516330 PIP4K2BP78356 416 aa8.87□□□□□ -0.99
SCARNA18.1-201ENST00000516330 STAC3Q96MF2 364 aa8.86□□□□□ -0.99
SCARNA18.1-201ENST00000516330 C19orf44Q9H6X5 657 aa8.86□□□□□ -0.99
SCARNA18.1-201ENST00000516330 AMOTL2Q9Y2J4 779 aa8.86□□□□□ -0.99
SCARNA18.1-201ENST00000516330 MST1RQ04912 1400 aa8.86□□□□□ -0.99
SCARNA18.1-201ENST00000516330 ADGRB2O60241 1585 aa8.86□□□□□ -0.99
SCARNA18.1-201ENST00000516330 DLC1Q96QB1 1528 aa8.85□□□□□ -0.99
SCARNA18.1-201ENST00000516330 HSPA1LP34931 641 aa8.85□□□□□ -0.99
SCARNA18.1-201ENST00000516330 KIAA1210Q9ULL0 1709 aa8.85□□□□□ -0.99
SCARNA18.1-201ENST00000516330 DISP3Q9P2K9 1392 aa8.85□□□□□ -0.99
SCARNA18.1-201ENST00000516330 NUTM2DQ5VT03 806 aaPredicted RBP8.84□□□□□ -0.99
SCARNA18.1-201ENST00000516330 KIF1AQ12756 1690 aa8.84□□□□□ -0.99
SCARNA18.1-201ENST00000516330 LRPPRCP42704 1394 aaKnown RBP8.84□□□□□ -0.99
SCARNA18.1-201ENST00000516330 ADGRB1O14514 1584 aa8.83□□□□□ -1
SCARNA18.1-201ENST00000516330 ATF3P18847 181 aa8.83□□□□□ -1
SCARNA18.1-201ENST00000516330 ABCC11Q96J66 1382 aa8.83□□□□□ -1
SCARNA18.1-201ENST00000516330 FOXD1Q16676 465 aa8.82□□□□□ -1
SCARNA18.1-201ENST00000516330 C14orf37Q86TY3 774 aa8.82□□□□□ -1
SCARNA18.1-201ENST00000516330 SLAIN2Q9P270 581 aa8.82□□□□□ -1
SCARNA18.1-201ENST00000516330 ROBO2Q9HCK4 1378 aa8.82□□□□□ -1
SCARNA18.1-201ENST00000516330 JCADQ9P266 1359 aa8.82□□□□□ -1
SCARNA18.1-201ENST00000516330 FMN2Q9NZ56 1722 aa8.82□□□□□ -1
SCARNA18.1-201ENST00000516330 YTHDC2Q9H6S0 1430 aaKnown RBP8.81□□□□□ -1
SCARNA18.1-201ENST00000516330 ADGRF5Q8IZF2 1346 aa8.8□□□□□ -1
SCARNA18.1-201ENST00000516330 C1orf167Q5SNV9 1468 aa8.8□□□□□ -1
SCARNA18.1-201ENST00000516330 SPATA31A6Q5VVP1 1343 aa8.8□□□□□ -1
SCARNA18.1-201ENST00000516330 ARHGEF28Q8N1W1 1705 aaKnown RBP8.79□□□□□ -1
SCARNA18.1-201ENST00000516330 COL22A1Q8NFW1 1626 aaPredicted RBP8.79□□□□□ -1
SCARNA18.1-201ENST00000516330 EIF3AQ14152 1382 aaKnown RBP8.78□□□□□ -1
SCARNA18.1-201ENST00000516330 DHX57Q6P158 1386 aaKnown RBP8.78□□□□□ -1
SCARNA18.1-201ENST00000516330 BRINP3Q76B58 766 aa8.78□□□□□ -1
SCARNA18.1-201ENST00000516330 SIRT1Q96EB6 747 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms