RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 ERICH2A1L162 156 aa13.53□□□□□ -0.24
TRIM41-209ENST00000515834 CPLX2Q6PUV4 134 aaKnown RBP13.53□□□□□ -0.24
TRIM41-209ENST00000515834 NUTM2BA6NNL0 878 aaPredicted RBP13.53□□□□□ -0.24
TRIM41-209ENST00000515834 NUTM2EB1AL46 878 aaPredicted RBP13.53□□□□□ -0.24
TRIM41-209ENST00000515834 NUTM2AQ8IVF1 878 aaPredicted RBP13.53□□□□□ -0.24
TRIM41-209ENST00000515834 CCER2I3L3R5 266 aa13.53□□□□□ -0.24
TRIM41-209ENST00000515834 ANO2Q9NQ90 1003 aa13.53□□□□□ -0.24
TRIM41-209ENST00000515834 NLRP2Q9NX02 1062 aa13.53□□□□□ -0.24
TRIM41-209ENST00000515834 TPM1P09493 284 aa13.52□□□□□ -0.24
TRIM41-209ENST00000515834 RAPGEF4Q8WZA2 1011 aa13.52□□□□□ -0.24
TRIM41-209ENST00000515834 CPLX1O14810 134 aa13.52□□□□□ -0.24
TRIM41-209ENST00000515834 DDX58O95786 925 aaKnown RBP13.52□□□□□ -0.24
TRIM41-209ENST00000515834 TRDNQ13061 729 aa13.52□□□□□ -0.25
TRIM41-209ENST00000515834 OSCARQ8IYS5 282 aa13.52□□□□□ -0.25
TRIM41-209ENST00000515834 CCDC47Q96A33 483 aaKnown RBP13.52□□□□□ -0.25
TRIM41-209ENST00000515834 PANK3Q9H999 370 aa13.52□□□□□ -0.25
TRIM41-209ENST00000515834 R3HCC1Q9Y3T6 440 aaKnown RBP13.52□□□□□ -0.25
TRIM41-209ENST00000515834 BAZ1AQ9NRL2 1556 aaPredicted RBP13.52□□□□□ -0.25
TRIM41-209ENST00000515834 GOLGA6L19H0YKK7 550 aa13.51□□□□□ -0.25
TRIM41-209ENST00000515834 PHF14O94880 888 aa13.51□□□□□ -0.25
TRIM41-209ENST00000515834 KDM4AO75164 1064 aa13.51□□□□□ -0.25
TRIM41-209ENST00000515834 TNNT3P45378 269 aaPredicted RBP13.51□□□□□ -0.25
TRIM41-209ENST00000515834 CGNL1Q0VF96 1302 aa13.51□□□□□ -0.25
TRIM41-209ENST00000515834 TMEM132AQ24JP5 1023 aa13.51□□□□□ -0.25
TRIM41-209ENST00000515834 DEKP35659 375 aaKnown RBP13.5□□□□□ -0.25
TRIM41-209ENST00000515834 FMN1Q68DA7 1419 aa13.5□□□□□ -0.25
TRIM41-209ENST00000515834 GOLGA6L3A6NEY3 463 aa13.5□□□□□ -0.25
TRIM41-209ENST00000515834 BECN2A8MW95 431 aa13.5□□□□□ -0.25
TRIM41-209ENST00000515834 L3MBTL2Q969R5 705 aa13.5□□□□□ -0.25
TRIM41-209ENST00000515834 G3BP1Q13283 466 aaKnown RBP eCLIP13.5□□□□□ -0.25
TRIM41-209ENST00000515834 NEUROD6Q96NK8 337 aa13.49□□□□□ -0.25
TRIM41-209ENST00000515834 RIC3Q7Z5B4 369 aa13.49□□□□□ -0.25
TRIM41-209ENST00000515834 STRN4Q9NRL3 753 aa13.49□□□□□ -0.25
TRIM41-209ENST00000515834 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
TRIM41-209ENST00000515834 RAB3GAP2Q9H2M9 1393 aa13.48□□□□□ -0.25
TRIM41-209ENST00000515834 FKBP5Q13451 457 aaPredicted RBP13.48□□□□□ -0.25
TRIM41-209ENST00000515834 RSPH4AQ5TD94 716 aa13.48□□□□□ -0.25
TRIM41-209ENST00000515834 PAF1Q8N7H5 531 aa13.48□□□□□ -0.25
TRIM41-209ENST00000515834 RUFY2Q8WXA3 655 aa13.47□□□□□ -0.25
TRIM41-209ENST00000515834 PIP4K2BP78356 416 aa13.47□□□□□ -0.25
TRIM41-209ENST00000515834 CT47A1Q5JQC4 288 aaPredicted RBP13.47□□□□□ -0.25
TRIM41-209ENST00000515834 CHMP4CQ96CF2 233 aa13.47□□□□□ -0.25
TRIM41-209ENST00000515834 RBM42Q9BTD8 480 aaKnown RBP13.47□□□□□ -0.25
TRIM41-209ENST00000515834 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
TRIM41-209ENST00000515834 ODF2Q5BJF6 829 aa13.47□□□□□ -0.25
TRIM41-209ENST00000515834 WASHC4Q2M389 1173 aa13.47□□□□□ -0.25
TRIM41-209ENST00000515834 NLRP13Q86W25 1043 aa13.46□□□□□ -0.25
TRIM41-209ENST00000515834 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.25
TRIM41-209ENST00000515834 ZFYVE27Q5T4F4 411 aa13.46□□□□□ -0.25
TRIM41-209ENST00000515834 FHOD3Q2V2M9 1422 aa13.46□□□□□ -0.26
TRIM41-209ENST00000515834 UACAQ9BZF9 1416 aa13.46□□□□□ -0.26
TRIM41-209ENST00000515834 TSPYL4Q9UJ04 414 aa13.45□□□□□ -0.26
TRIM41-209ENST00000515834 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
TRIM41-209ENST00000515834 ST20-MTHFSA0A0A6YYL1 179 aa13.45□□□□□ -0.26
TRIM41-209ENST00000515834 DIAPH1O60610 1272 aaKnown RBP13.45□□□□□ -0.26
TRIM41-209ENST00000515834 ZKSCAN1P17029 563 aaPredicted RBP13.45□□□□□ -0.26
TRIM41-209ENST00000515834 HMOX1P09601 288 aa13.45□□□□□ -0.26
TRIM41-209ENST00000515834 CCDC70Q6NSX1 233 aa13.45□□□□□ -0.26
TRIM41-209ENST00000515834 NAP1L1P55209 391 aaKnown RBP13.44□□□□□ -0.26
TRIM41-209ENST00000515834 ANKRD20A12PQ8NF67 263 aa13.44□□□□□ -0.26
TRIM41-209ENST00000515834 ZKSCAN2Q63HK3 967 aa13.44□□□□□ -0.26
TRIM41-209ENST00000515834 IPO7O95373 1038 aaKnown RBP13.44□□□□□ -0.26
TRIM41-209ENST00000515834 RIPK4P57078 832 aa13.44□□□□□ -0.26
TRIM41-209ENST00000515834 WWC2Q6AWC2 1192 aa13.44□□□□□ -0.26
TRIM41-209ENST00000515834 ZNF592Q92610 1267 aa13.43□□□□□ -0.26
TRIM41-209ENST00000515834 RBM19Q9Y4C8 960 aaKnown RBP13.43□□□□□ -0.26
TRIM41-209ENST00000515834 WASHC2AQ641Q2 1341 aa13.42□□□□□ -0.26
TRIM41-209ENST00000515834 ESCO1Q5FWF5 840 aa13.42□□□□□ -0.26
TRIM41-209ENST00000515834 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRIM41-209ENST00000515834 ATP6V1DQ9Y5K8 247 aa13.42□□□□□ -0.26
TRIM41-209ENST00000515834 ATP2B2Q01814 1243 aa13.41□□□□□ -0.26
TRIM41-209ENST00000515834 EPS15P42566 896 aa13.41□□□□□ -0.26
TRIM41-209ENST00000515834 BICD2Q8TD16 824 aa13.41□□□□□ -0.26
TRIM41-209ENST00000515834 COG6Q9Y2V7 657 aa13.41□□□□□ -0.26
TRIM41-209ENST00000515834 KIF15Q9NS87 1388 aa13.41□□□□□ -0.26
TRIM41-209ENST00000515834 ZNF428Q96B54 188 aa13.41□□□□□ -0.26
TRIM41-209ENST00000515834 HOOK1Q9UJC3 728 aaKnown RBP13.4□□□□□ -0.26
TRIM41-209ENST00000515834 KIF6Q6ZMV9 814 aa13.4□□□□□ -0.26
TRIM41-209ENST00000515834 PTPRGP23470 1445 aa13.4□□□□□ -0.26
TRIM41-209ENST00000515834 IBSPP21815 317 aaPredicted RBP13.4□□□□□ -0.26
TRIM41-209ENST00000515834 SAFBQ15424 915 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRIM41-209ENST00000515834 RNF20Q5VTR2 975 aa13.4□□□□□ -0.26
TRIM41-209ENST00000515834 RALYLQ86SE5 291 aaKnown RBP13.4□□□□□ -0.26
TRIM41-209ENST00000515834 DDX49Q9Y6V7 483 aaKnown RBP13.39□□□□□ -0.27
TRIM41-209ENST00000515834 SMARCA2P51531 1590 aa13.39□□□□□ -0.27
TRIM41-209ENST00000515834 PROSER2Q86WR7 435 aaPredicted RBP13.39□□□□□ -0.27
TRIM41-209ENST00000515834 NLRP6P59044 892 aa13.39□□□□□ -0.27
TRIM41-209ENST00000515834 VPS8Q8N3P4 1428 aa13.38□□□□□ -0.27
TRIM41-209ENST00000515834 RBM5P52756 815 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRIM41-209ENST00000515834 VPS37CA5D8V6 355 aaPredicted RBP13.38□□□□□ -0.27
TRIM41-209ENST00000515834 MYBBP1AQ9BQG0 1328 aaKnown RBP13.38□□□□□ -0.27
TRIM41-209ENST00000515834 STK11IPQ8N1F8 1099 aa13.38□□□□□ -0.27
TRIM41-209ENST00000515834 ABTB2Q8N961 1025 aa13.38□□□□□ -0.27
TRIM41-209ENST00000515834 APAF1O14727 1248 aa13.37□□□□□ -0.27
TRIM41-209ENST00000515834 PHLDB1Q86UU1 1377 aa13.37□□□□□ -0.27
TRIM41-209ENST00000515834 E9PSI1 815 aa13.37□□□□□ -0.27
TRIM41-209ENST00000515834 HSP90AB2PQ58FF8 381 aa13.37□□□□□ -0.27
TRIM41-209ENST00000515834 BRMS1Q9HCU9 246 aa13.37□□□□□ -0.27
TRIM41-209ENST00000515834 DDX54Q8TDD1 881 aaKnown RBP13.36□□□□□ -0.27
TRIM41-209ENST00000515834 CCDC88BA6NC98 1476 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms