RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 GPRASP1Q5JY77 1395 aa19.69■□□□□ 0.74
ABCC3-216ENST00000515585 C3P01024 1663 aa19.68■□□□□ 0.74
ABCC3-216ENST00000515585 DCAF11Q8TEB1 546 aa19.67■□□□□ 0.74
ABCC3-216ENST00000515585 NEXMIFQ5QGS0 1516 aa19.66■□□□□ 0.74
ABCC3-216ENST00000515585 SLC52A1Q9NWF4 448 aa19.66■□□□□ 0.74
ABCC3-216ENST00000515585 ZMYM3Q14202 1370 aa19.66■□□□□ 0.74
ABCC3-216ENST00000515585 RGL3Q3MIN7 710 aa19.64■□□□□ 0.73
ABCC3-216ENST00000515585 IQGAP1P46940 1657 aa19.62■□□□□ 0.73
ABCC3-216ENST00000515585 RPGRIP1LQ68CZ1 1315 aa19.61■□□□□ 0.73
ABCC3-216ENST00000515585 FBXO31Q5XUX0 539 aaPredicted RBP19.61■□□□□ 0.73
ABCC3-216ENST00000515585 ZFYVE9O95405 1425 aa19.6■□□□□ 0.73
ABCC3-216ENST00000515585 IDI1Q13907 227 aa19.6■□□□□ 0.73
ABCC3-216ENST00000515585 KDM2AQ9Y2K7 1162 aa19.59■□□□□ 0.73
ABCC3-216ENST00000515585 UBR1Q8IWV7 1749 aa19.58■□□□□ 0.72
ABCC3-216ENST00000515585 SETBP1Q9Y6X0 1596 aa19.57■□□□□ 0.72
ABCC3-216ENST00000515585 A2ML1A8K2U0 1454 aa19.57■□□□□ 0.72
ABCC3-216ENST00000515585 HSPA5P11021 654 aaKnown RBP19.57■□□□□ 0.72
ABCC3-216ENST00000515585 EIF4G2P78344 907 aaKnown RBP eCLIP19.57■□□□□ 0.72
ABCC3-216ENST00000515585 PIK3C2GO75747 1445 aa19.57■□□□□ 0.72
ABCC3-216ENST00000515585 USP47Q96K76 1375 aa19.55■□□□□ 0.72
ABCC3-216ENST00000515585 STRCQ7RTU9 1775 aa19.54■□□□□ 0.72
ABCC3-216ENST00000515585 TNRQ92752 1358 aa19.54■□□□□ 0.72
ABCC3-216ENST00000515585 ROCK2O75116 1388 aaKnown RBP19.53■□□□□ 0.72
ABCC3-216ENST00000515585 NLRP1Q9C000 1473 aa19.53■□□□□ 0.72
ABCC3-216ENST00000515585 ADGRF5Q8IZF2 1346 aa19.52■□□□□ 0.72
ABCC3-216ENST00000515585 ZNF326Q5BKZ1 582 aaKnown RBP19.52■□□□□ 0.72
ABCC3-216ENST00000515585 ADGRB1O14514 1584 aa19.52■□□□□ 0.71
ABCC3-216ENST00000515585 NBPF1Q3BBV0 1214 aa19.51■□□□□ 0.71
ABCC3-216ENST00000515585 ESF1Q9H501 851 aaKnown RBP19.51■□□□□ 0.71
ABCC3-216ENST00000515585 SETD1AO15047 1707 aaKnown RBP19.51■□□□□ 0.71
ABCC3-216ENST00000515585 IQSEC2Q5JU85 1478 aa19.5■□□□□ 0.71
ABCC3-216ENST00000515585 LTBP4Q8N2S1 1624 aa19.5■□□□□ 0.71
ABCC3-216ENST00000515585 MYO3AQ8NEV4 1616 aa19.5■□□□□ 0.71
ABCC3-216ENST00000515585 UBAP1LF5GYI3 381 aa19.48■□□□□ 0.71
ABCC3-216ENST00000515585 DIEXFQ68CQ4 756 aaKnown RBP19.48■□□□□ 0.71
ABCC3-216ENST00000515585 CARD11Q9BXL7 1154 aa19.48■□□□□ 0.71
ABCC3-216ENST00000515585 ZNF142P52746 1687 aaPredicted RBP19.47■□□□□ 0.71
ABCC3-216ENST00000515585 HIRIP3Q9BW71 556 aaPredicted RBP19.47■□□□□ 0.71
ABCC3-216ENST00000515585 NRXN3Q9Y4C0 1643 aa19.46■□□□□ 0.71
ABCC3-216ENST00000515585 SCAF11Q99590 1463 aaKnown RBP19.46■□□□□ 0.71
ABCC3-216ENST00000515585 ASXL1Q8IXJ9 1541 aa19.46■□□□□ 0.71
ABCC3-216ENST00000515585 CHGAP10645 457 aaKnown RBP19.45■□□□□ 0.7
ABCC3-216ENST00000515585 SETD1BQ9UPS6 1966 aaKnown RBP19.44■□□□□ 0.7
ABCC3-216ENST00000515585 C14orf93Q9H972 538 aaKnown RBP19.44■□□□□ 0.7
ABCC3-216ENST00000515585 ARHGAP23Q9P227 1491 aa19.43■□□□□ 0.7
ABCC3-216ENST00000515585 SLIT1O75093 1534 aa19.43■□□□□ 0.7
ABCC3-216ENST00000515585 VGFO15240 615 aaPredicted RBP19.43■□□□□ 0.7
ABCC3-216ENST00000515585 WASHC2AQ641Q2 1341 aa19.43■□□□□ 0.7
ABCC3-216ENST00000515585 CCDC7Q96M83 1385 aa19.43■□□□□ 0.7
ABCC3-216ENST00000515585 RIMS2Q9UQ26 1411 aa19.42■□□□□ 0.7
ABCC3-216ENST00000515585 C11orf95C9JLR9 678 aaPredicted RBP19.42■□□□□ 0.7
ABCC3-216ENST00000515585 ARHGEF28Q8N1W1 1705 aaKnown RBP19.42■□□□□ 0.7
ABCC3-216ENST00000515585 ALKQ9UM73 1620 aa19.4■□□□□ 0.7
ABCC3-216ENST00000515585 CFAP70Q5T0N1 1121 aa19.4■□□□□ 0.7
ABCC3-216ENST00000515585 CEP170BQ9Y4F5 1589 aaPredicted RBP19.4■□□□□ 0.7
ABCC3-216ENST00000515585 TESK2Q96S53 571 aa19.38■□□□□ 0.69
ABCC3-216ENST00000515585 TMEM2Q9UHN6 1383 aa19.38■□□□□ 0.69
ABCC3-216ENST00000515585 KIF7Q2M1P5 1343 aa19.37■□□□□ 0.69
ABCC3-216ENST00000515585 ZNF335Q9H4Z2 1342 aaPredicted RBP19.37■□□□□ 0.69
ABCC3-216ENST00000515585 ST20-MTHFSA0A0A6YYL1 179 aa19.37■□□□□ 0.69
ABCC3-216ENST00000515585 SBNO2Q9Y2G9 1366 aa19.35■□□□□ 0.69
ABCC3-216ENST00000515585 NCKAP5LQ9HCH0 1330 aa19.35■□□□□ 0.69
ABCC3-216ENST00000515585 QRICH2Q9H0J4 1663 aa19.34■□□□□ 0.69
ABCC3-216ENST00000515585 KNDC1Q76NI1 1749 aa19.34■□□□□ 0.69
ABCC3-216ENST00000515585 EIF3AQ14152 1382 aaKnown RBP19.32■□□□□ 0.68
ABCC3-216ENST00000515585 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.32■□□□□ 0.68
ABCC3-216ENST00000515585 STAG3Q9UJ98 1225 aa19.32■□□□□ 0.68
ABCC3-216ENST00000515585 MED14O60244 1454 aa19.32■□□□□ 0.68
ABCC3-216ENST00000515585 HSPA1LP34931 641 aa19.31■□□□□ 0.68
ABCC3-216ENST00000515585 DLC1Q96QB1 1528 aa19.3■□□□□ 0.68
ABCC3-216ENST00000515585 DDX10Q13206 875 aaKnown RBP19.3■□□□□ 0.68
ABCC3-216ENST00000515585 NUTM2DQ5VT03 806 aaPredicted RBP19.29■□□□□ 0.68
ABCC3-216ENST00000515585 ADAMTS13Q76LX8 1427 aa19.28■□□□□ 0.68
ABCC3-216ENST00000515585 MYOM1P52179 1685 aa19.28■□□□□ 0.68
ABCC3-216ENST00000515585 PLEKHG1Q9ULL1 1385 aa19.28■□□□□ 0.68
ABCC3-216ENST00000515585 DIP2AQ14689 1571 aa19.27■□□□□ 0.67
ABCC3-216ENST00000515585 YTHDC2Q9H6S0 1430 aaKnown RBP19.26■□□□□ 0.67
ABCC3-216ENST00000515585 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
ABCC3-216ENST00000515585 HDGFP51858 240 aaKnown RBP19.25■□□□□ 0.67
ABCC3-216ENST00000515585 PIP4K2BP78356 416 aa19.25■□□□□ 0.67
ABCC3-216ENST00000515585 TECPR2O15040 1411 aa19.25■□□□□ 0.67
ABCC3-216ENST00000515585 TMEM132EQ6IEE7 984 aa19.24■□□□□ 0.67
ABCC3-216ENST00000515585 LTKP29376 864 aa19.23■□□□□ 0.67
ABCC3-216ENST00000515585 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
ABCC3-216ENST00000515585 CPS1P31327 1500 aa19.23■□□□□ 0.67
ABCC3-216ENST00000515585 LRPPRCP42704 1394 aaKnown RBP19.22■□□□□ 0.67
ABCC3-216ENST00000515585 MIER1Q8N108 512 aa19.22■□□□□ 0.67
ABCC3-216ENST00000515585 THEMISQ8N1K5 641 aaPredicted RBP19.22■□□□□ 0.67
ABCC3-216ENST00000515585 TOM1O60784 492 aa19.21■□□□□ 0.67
ABCC3-216ENST00000515585 MED1Q15648 1581 aaPredicted RBP19.21■□□□□ 0.67
ABCC3-216ENST00000515585 CENPJQ9HC77 1338 aaPredicted RBP19.21■□□□□ 0.67
ABCC3-216ENST00000515585 TULP4Q9NRJ4 1543 aa19.2■□□□□ 0.66
ABCC3-216ENST00000515585 ABCC11Q96J66 1382 aa19.2■□□□□ 0.66
ABCC3-216ENST00000515585 SLC24A1O60721 1099 aa19.2■□□□□ 0.66
ABCC3-216ENST00000515585 TMF1P82094 1093 aa19.2■□□□□ 0.66
ABCC3-216ENST00000515585 METP08581 1390 aa19.19■□□□□ 0.66
ABCC3-216ENST00000515585 XRN1Q8IZH2 1706 aaKnown RBP19.18■□□□□ 0.66
ABCC3-216ENST00000515585 TRAK1Q9UPV9 953 aa19.17■□□□□ 0.66
ABCC3-216ENST00000515585 FAM135BQ49AJ0 1406 aa19.16■□□□□ 0.66
ABCC3-216ENST00000515585 TXNDC2Q86VQ3 553 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms