RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	HPS5	Q9UPZ3	1129 aa		11.7	□□□□□ -0.54
HIPK1-210	ENST00000514621	HIC1	Q14526	733 aa		11.69	□□□□□ -0.54
HIPK1-210	ENST00000514621	GPIHBP1	Q8IV16	184 aa		11.69	□□□□□ -0.54
HIPK1-210	ENST00000514621	TSR3	Q9UJK0	312 aa	Known RBP	11.69	□□□□□ -0.54
HIPK1-210	ENST00000514621	SUPT5H	O00267	1087 aa	Known RBP	11.68	□□□□□ -0.54
HIPK1-210	ENST00000514621	EYA1	Q99502	592 aa		11.68	□□□□□ -0.54
HIPK1-210	ENST00000514621	NYAP1	Q6ZVC0	841 aa		11.67	□□□□□ -0.54
HIPK1-210	ENST00000514621	GPR37	O15354	613 aa		11.66	□□□□□ -0.54
HIPK1-210	ENST00000514621	ADGRG1	Q9Y653	693 aa		11.66	□□□□□ -0.54
HIPK1-210	ENST00000514621	GNPAT	O15228	680 aa		11.64	□□□□□ -0.55
HIPK1-210	ENST00000514621	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
HIPK1-210	ENST00000514621	FAM161A	Q3B820	660 aa		11.63	□□□□□ -0.55
HIPK1-210	ENST00000514621	NES	P48681	1621 aa		11.63	□□□□□ -0.55
HIPK1-210	ENST00000514621	HDGF	P51858	240 aa	Known RBP	11.62	□□□□□ -0.55
HIPK1-210	ENST00000514621	SWT1	Q5T5J6	900 aa	Known RBP	11.62	□□□□□ -0.55
HIPK1-210	ENST00000514621	RBM46	Q8TBY0	533 aa	Known RBP	11.62	□□□□□ -0.55
HIPK1-210	ENST00000514621	ITGBL1	O95965	494 aa	Predicted RBP	11.61	□□□□□ -0.55
HIPK1-210	ENST00000514621	PPP4C	P60510	307 aa		11.61	□□□□□ -0.55
HIPK1-210	ENST00000514621	IFFO2	Q5TF58	517 aa		11.61	□□□□□ -0.55
HIPK1-210	ENST00000514621	CADPS	Q9ULU8	1353 aa		11.61	□□□□□ -0.55
HIPK1-210	ENST00000514621	CCDC88B	A6NC98	1476 aa		11.61	□□□□□ -0.55
HIPK1-210	ENST00000514621	RNF40	O75150	1001 aa		11.6	□□□□□ -0.55
HIPK1-210	ENST00000514621	LMOD2	Q6P5Q4	547 aa		11.59	□□□□□ -0.55
HIPK1-210	ENST00000514621	OAT	P04181	439 aa		11.58	□□□□□ -0.56
HIPK1-210	ENST00000514621	FECH	P22830	423 aa		11.58	□□□□□ -0.56
HIPK1-210	ENST00000514621	DNAJB2	P25686	324 aa		11.58	□□□□□ -0.56
HIPK1-210	ENST00000514621	LAMC3	Q9Y6N6	1575 aa		11.58	□□□□□ -0.56
HIPK1-210	ENST00000514621	SLF2	Q8IX21	1173 aa		11.56	□□□□□ -0.56
HIPK1-210	ENST00000514621	TMEM134	Q9H6X4	195 aa		11.56	□□□□□ -0.56
HIPK1-210	ENST00000514621	RCCD1	A6NED2	376 aa		11.55	□□□□□ -0.56
HIPK1-210	ENST00000514621	CFTR	P13569	1480 aa		11.55	□□□□□ -0.56
HIPK1-210	ENST00000514621	SLC4A3	P48751	1232 aa		11.54	□□□□□ -0.56
HIPK1-210	ENST00000514621	PXYLP1	Q8TE99	480 aa		11.54	□□□□□ -0.56
HIPK1-210	ENST00000514621	BCAN	Q96GW7	911 aa		11.54	□□□□□ -0.56
HIPK1-210	ENST00000514621	ERCC6	Q03468	1493 aa		11.53	□□□□□ -0.56
HIPK1-210	ENST00000514621	APLP1	P51693	650 aa		11.53	□□□□□ -0.56
HIPK1-210	ENST00000514621	PDS5B	Q9NTI5	1447 aa		11.52	□□□□□ -0.56
HIPK1-210	ENST00000514621		A0A0G2JS52	829 aa		11.52	□□□□□ -0.57
HIPK1-210	ENST00000514621	METTL3	Q86U44	580 aa	Known RBP	11.52	□□□□□ -0.57
HIPK1-210	ENST00000514621	NECTIN2	Q92692	538 aa		11.52	□□□□□ -0.57
HIPK1-210	ENST00000514621	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.51	□□□□□ -0.57
HIPK1-210	ENST00000514621	KCNC4	Q03721	635 aa		11.5	□□□□□ -0.57
HIPK1-210	ENST00000514621	MAP2K5	Q13163	448 aa		11.49	□□□□□ -0.57
HIPK1-210	ENST00000514621	TJAP1	Q5JTD0	557 aa		11.49	□□□□□ -0.57
HIPK1-210	ENST00000514621	MTR	Q99707	1265 aa		11.48	□□□□□ -0.57
HIPK1-210	ENST00000514621	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.47	□□□□□ -0.57
HIPK1-210	ENST00000514621	FANCD2	Q9BXW9	1451 aa		11.45	□□□□□ -0.58
HIPK1-210	ENST00000514621	IRF6	O14896	467 aa		11.45	□□□□□ -0.58
HIPK1-210	ENST00000514621	ZC3H15	Q8WU90	426 aa	Known RBP	11.45	□□□□□ -0.58
HIPK1-210	ENST00000514621	KIF21A	Q7Z4S6	1674 aa		11.45	□□□□□ -0.58
HIPK1-210	ENST00000514621	IL21	Q9HBE4	155 aa		11.44	□□□□□ -0.58
HIPK1-210	ENST00000514621	SLC10A3	P09131	477 aa		11.43	□□□□□ -0.58
HIPK1-210	ENST00000514621	NLRP7	Q8WX94	980 aa		11.43	□□□□□ -0.58
HIPK1-210	ENST00000514621	PHOX2B	Q99453	314 aa		11.43	□□□□□ -0.58
HIPK1-210	ENST00000514621	PRR14	Q9BWN1	585 aa		11.43	□□□□□ -0.58
HIPK1-210	ENST00000514621	CEP164	Q9UPV0	1460 aa		11.43	□□□□□ -0.58
HIPK1-210	ENST00000514621	ZMYND10	O75800	440 aa		11.42	□□□□□ -0.58
HIPK1-210	ENST00000514621	KRI1	Q8N9T8	703 aa	Known RBP	11.42	□□□□□ -0.58
HIPK1-210	ENST00000514621	CFH	P08603	1231 aa		11.41	□□□□□ -0.58
HIPK1-210	ENST00000514621	BARGIN	Q6ZT62	677 aa		11.41	□□□□□ -0.58
HIPK1-210	ENST00000514621	COPS2	P61201	443 aa		11.4	□□□□□ -0.58
HIPK1-210	ENST00000514621	RSPH4A	Q5TD94	716 aa		11.4	□□□□□ -0.58
HIPK1-210	ENST00000514621	ZNF516	Q92618	1163 aa		11.4	□□□□□ -0.58
HIPK1-210	ENST00000514621	DAXX	Q9UER7	740 aa	Predicted RBP	11.4	□□□□□ -0.58
HIPK1-210	ENST00000514621	THOC2	Q8NI27	1593 aa	Known RBP	11.4	□□□□□ -0.58
HIPK1-210	ENST00000514621	MRC2	Q9UBG0	1479 aa		11.39	□□□□□ -0.59
HIPK1-210	ENST00000514621	PRDM2	Q13029	1718 aa		11.39	□□□□□ -0.59
HIPK1-210	ENST00000514621	CCDC102A	Q96A19	550 aa		11.39	□□□□□ -0.59
HIPK1-210	ENST00000514621	RGS20	O76081	388 aa		11.38	□□□□□ -0.59
HIPK1-210	ENST00000514621	KMT5B	Q4FZB7	885 aa		11.38	□□□□□ -0.59
HIPK1-210	ENST00000514621	PCDHB3	Q9Y5E6	796 aa		11.38	□□□□□ -0.59
HIPK1-210	ENST00000514621	CUX2	O14529	1486 aa		11.38	□□□□□ -0.59
HIPK1-210	ENST00000514621	ACTN4	O43707	911 aa	Known RBP	11.37	□□□□□ -0.59
HIPK1-210	ENST00000514621	BLOC1S3	Q6QNY0	202 aa		11.36	□□□□□ -0.59
HIPK1-210	ENST00000514621	SULF1	Q8IWU6	871 aa		11.35	□□□□□ -0.59
HIPK1-210	ENST00000514621	WDR62	O43379	1518 aa		11.35	□□□□□ -0.59
HIPK1-210	ENST00000514621	NKX2-3	Q8TAU0	364 aa		11.34	□□□□□ -0.59
HIPK1-210	ENST00000514621	URB2	Q14146	1524 aa	Known RBP	11.34	□□□□□ -0.59
HIPK1-210	ENST00000514621	ZPR1	O75312	459 aa		11.33	□□□□□ -0.6
HIPK1-210	ENST00000514621	DDX11L8	A8MPP1	907 aa		11.32	□□□□□ -0.6
HIPK1-210	ENST00000514621	RDH13	Q8NBN7	331 aa		11.32	□□□□□ -0.6
HIPK1-210	ENST00000514621	MDM2	Q00987	491 aa	Predicted RBP	11.3	□□□□□ -0.6
HIPK1-210	ENST00000514621	CLCN1	P35523	988 aa		11.29	□□□□□ -0.6
HIPK1-210	ENST00000514621	PPP1R18	Q6NYC8	613 aa		11.29	□□□□□ -0.6
HIPK1-210	ENST00000514621	TOPBP1	Q92547	1522 aa		11.29	□□□□□ -0.6
HIPK1-210	ENST00000514621	TLL1	O43897	1013 aa		11.28	□□□□□ -0.6
HIPK1-210	ENST00000514621	GPCPD1	Q9NPB8	672 aa		11.28	□□□□□ -0.6
HIPK1-210	ENST00000514621	ABCC8	Q09428	1581 aa		11.28	□□□□□ -0.6
HIPK1-210	ENST00000514621	AK7	Q96M32	723 aa		11.27	□□□□□ -0.61
HIPK1-210	ENST00000514621	DNMBP	Q6XZF7	1577 aa		11.26	□□□□□ -0.61
HIPK1-210	ENST00000514621	PUS10	Q3MIT2	529 aa	Known RBP	11.26	□□□□□ -0.61
HIPK1-210	ENST00000514621	NR1I2	O75469	434 aa		11.25	□□□□□ -0.61
HIPK1-210	ENST00000514621	GCGR	P47871	477 aa		11.25	□□□□□ -0.61
HIPK1-210	ENST00000514621	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.25	□□□□□ -0.61
HIPK1-210	ENST00000514621	FUT2	Q10981	343 aa		11.24	□□□□□ -0.61
HIPK1-210	ENST00000514621	AMHR2	Q16671	573 aa		11.24	□□□□□ -0.61
HIPK1-210	ENST00000514621	CUX1	P39880	1505 aa		11.24	□□□□□ -0.61
HIPK1-210	ENST00000514621	CD46	P15529	392 aa		11.23	□□□□□ -0.61
HIPK1-210	ENST00000514621	TTLL12	Q14166	644 aa	Predicted RBP	11.22	□□□□□ -0.61
HIPK1-210	ENST00000514621	TMUB1	Q9BVT8	246 aa		11.22	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms