RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 E9PCH4 1651 aa23.13■■□□□ 1.29
TRIM41-206ENST00000514219 SPHKAPQ2M3C7 1700 aa23.11■■□□□ 1.29
TRIM41-206ENST00000514219 ANKRD30BQ9BXX2 1392 aa23.1■■□□□ 1.29
TRIM41-206ENST00000514219 CCDC144AA2RUR9 1427 aa23.09■■□□□ 1.29
TRIM41-206ENST00000514219 TRPM2O94759 1503 aa23.09■■□□□ 1.29
TRIM41-206ENST00000514219 TONSLQ96HA7 1378 aa23.02■■□□□ 1.28
TRIM41-206ENST00000514219 XIRP1Q702N8 1843 aaKnown RBP22.99■■□□□ 1.27
TRIM41-206ENST00000514219 POTEAQ6S8J7 498 aa22.98■■□□□ 1.27
TRIM41-206ENST00000514219 FOXD1Q16676 465 aa22.97■■□□□ 1.27
TRIM41-206ENST00000514219 SLC52A1Q9NWF4 448 aa22.97■■□□□ 1.27
TRIM41-206ENST00000514219 NOS1P29475 1434 aa22.97■■□□□ 1.27
TRIM41-206ENST00000514219 UBR1Q8IWV7 1749 aa22.96■■□□□ 1.27
TRIM41-206ENST00000514219 ERVK-7P63135 1459 aa22.95■■□□□ 1.26
TRIM41-206ENST00000514219 SCAF11Q99590 1463 aaKnown RBP22.94■■□□□ 1.26
TRIM41-206ENST00000514219 NEUROD1Q13562 356 aa22.94■■□□□ 1.26
TRIM41-206ENST00000514219 STAC3Q96MF2 364 aa22.93■■□□□ 1.26
TRIM41-206ENST00000514219 KIF1BO60333 1816 aa22.93■■□□□ 1.26
TRIM41-206ENST00000514219 FAM135BQ49AJ0 1406 aa22.92■■□□□ 1.26
TRIM41-206ENST00000514219 PIK3C2BO00750 1634 aa22.9■■□□□ 1.26
TRIM41-206ENST00000514219 SETD1AO15047 1707 aaKnown RBP22.9■■□□□ 1.26
TRIM41-206ENST00000514219 CLTCL1P53675 1640 aa22.9■■□□□ 1.26
TRIM41-206ENST00000514219 SLIT1O75093 1534 aa22.88■■□□□ 1.25
TRIM41-206ENST00000514219 ARHGAP23Q9P227 1491 aa22.88■■□□□ 1.25
TRIM41-206ENST00000514219 SIN3AQ96ST3 1273 aa22.88■■□□□ 1.25
TRIM41-206ENST00000514219 KDM5AP29375 1690 aaKnown RBP22.87■■□□□ 1.25
TRIM41-206ENST00000514219 LTKP29376 864 aa22.87■■□□□ 1.25
TRIM41-206ENST00000514219 ROBO1Q9Y6N7 1651 aa22.85■■□□□ 1.25
TRIM41-206ENST00000514219 TXNDC2Q86VQ3 553 aa22.84■■□□□ 1.25
TRIM41-206ENST00000514219 CFAP65Q6ZU64 1925 aaKnown RBP22.84■■□□□ 1.25
TRIM41-206ENST00000514219 ADGRB3O60242 1522 aa22.83■■□□□ 1.25
TRIM41-206ENST00000514219 SPATA31E1Q6ZUB1 1445 aa22.81■■□□□ 1.24
TRIM41-206ENST00000514219 RPGRIP1LQ68CZ1 1315 aa22.81■■□□□ 1.24
TRIM41-206ENST00000514219 TMEM94Q12767 1356 aa22.8■■□□□ 1.24
TRIM41-206ENST00000514219 STAG3Q9UJ98 1225 aa22.8■■□□□ 1.24
TRIM41-206ENST00000514219 EID1Q9Y6B2 187 aa22.78■■□□□ 1.24
TRIM41-206ENST00000514219 HDGFP51858 240 aaKnown RBP22.76■■□□□ 1.23
TRIM41-206ENST00000514219 L3MBTL2Q969R5 705 aa22.75■■□□□ 1.23
TRIM41-206ENST00000514219 TMEM131LA2VDJ0 1609 aa22.75■■□□□ 1.23
TRIM41-206ENST00000514219 TMEM2Q9UHN6 1383 aa22.74■■□□□ 1.23
TRIM41-206ENST00000514219 MYOM2P54296 1465 aa22.73■■□□□ 1.23
TRIM41-206ENST00000514219 CHGAP10645 457 aaKnown RBP22.73■■□□□ 1.23
TRIM41-206ENST00000514219 IDI1Q13907 227 aa22.73■■□□□ 1.23
TRIM41-206ENST00000514219 PHLPP1O60346 1717 aa22.72■■□□□ 1.23
TRIM41-206ENST00000514219 KCNA6P17658 529 aa22.72■■□□□ 1.23
TRIM41-206ENST00000514219 ZNF326Q5BKZ1 582 aaKnown RBP22.72■■□□□ 1.23
TRIM41-206ENST00000514219 PPP1R15AO75807 674 aaPredicted RBP22.71■■□□□ 1.23
TRIM41-206ENST00000514219 SRCAPQ6ZRS2 3230 aa22.7■■□□□ 1.23
TRIM41-206ENST00000514219 RGL3Q3MIN7 710 aa22.7■■□□□ 1.22
TRIM41-206ENST00000514219 DCAF11Q8TEB1 546 aa22.7■■□□□ 1.22
TRIM41-206ENST00000514219 RBM33Q96EV2 1170 aaKnown RBP22.7■■□□□ 1.22
TRIM41-206ENST00000514219 JCADQ9P266 1359 aa22.7■■□□□ 1.22
TRIM41-206ENST00000514219 IFT172Q9UG01 1749 aa22.69■■□□□ 1.22
TRIM41-206ENST00000514219 PROSER2Q86WR7 435 aaPredicted RBP22.69■■□□□ 1.22
TRIM41-206ENST00000514219 VGFO15240 615 aaPredicted RBP22.68■■□□□ 1.22
TRIM41-206ENST00000514219 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.68■■□□□ 1.22
TRIM41-206ENST00000514219 UPF1Q92900 1129 aaKnown RBP eCLIP22.68■■□□□ 1.22
TRIM41-206ENST00000514219 PPLO60437 1756 aa22.68■■□□□ 1.22
TRIM41-206ENST00000514219 NWD1Q149M9 1564 aa22.67■■□□□ 1.22
TRIM41-206ENST00000514219 NKTRP30414 1462 aaKnown RBP22.67■■□□□ 1.22
TRIM41-206ENST00000514219 ZFYVE9O95405 1425 aa22.67■■□□□ 1.22
TRIM41-206ENST00000514219 SLC26A8Q96RN1 970 aa22.65■■□□□ 1.22
TRIM41-206ENST00000514219 LAMC1P11047 1609 aa22.64■■□□□ 1.22
TRIM41-206ENST00000514219 MSH6P52701 1360 aa22.64■■□□□ 1.22
TRIM41-206ENST00000514219 COL16A1Q07092 1604 aaPredicted RBP22.64■■□□□ 1.22
TRIM41-206ENST00000514219 PRAG1Q86YV5 1406 aa22.64■■□□□ 1.21
TRIM41-206ENST00000514219 NEXMIFQ5QGS0 1516 aa22.63■■□□□ 1.21
TRIM41-206ENST00000514219 SLAIN2Q9P270 581 aa22.63■■□□□ 1.21
TRIM41-206ENST00000514219 LRP6O75581 1613 aa22.63■■□□□ 1.21
TRIM41-206ENST00000514219 KIAA1210Q9ULL0 1709 aa22.62■■□□□ 1.21
TRIM41-206ENST00000514219 MYO5BQ9ULV0 1848 aa22.61■■□□□ 1.21
TRIM41-206ENST00000514219 RALGAPBQ86X10 1494 aa22.6■■□□□ 1.21
TRIM41-206ENST00000514219 NRXN1Q9ULB1 1477 aa22.6■■□□□ 1.21
TRIM41-206ENST00000514219 KDM2AQ9Y2K7 1162 aa22.59■■□□□ 1.21
TRIM41-206ENST00000514219 RIMS2Q9UQ26 1411 aa22.58■■□□□ 1.21
TRIM41-206ENST00000514219 ZNF772Q68DY9 489 aaPredicted RBP22.58■■□□□ 1.21
TRIM41-206ENST00000514219 SPATA31A6Q5VVP1 1343 aa22.57■■□□□ 1.2
TRIM41-206ENST00000514219 TRPM1Q7Z4N2 1603 aa22.56■■□□□ 1.2
TRIM41-206ENST00000514219 MEX3CQ5U5Q3 659 aaKnown RBP22.55■■□□□ 1.2
TRIM41-206ENST00000514219 PIK3C2GO75747 1445 aa22.55■■□□□ 1.2
TRIM41-206ENST00000514219 ROCK2O75116 1388 aaKnown RBP22.53■■□□□ 1.2
TRIM41-206ENST00000514219 SHPRHQ149N8 1683 aa22.52■■□□□ 1.2
TRIM41-206ENST00000514219 SETBP1Q9Y6X0 1596 aa22.52■■□□□ 1.2
TRIM41-206ENST00000514219 CHD2O14647 1828 aaKnown RBP22.52■■□□□ 1.2
TRIM41-206ENST00000514219 AHDC1Q5TGY3 1603 aaPredicted RBP22.5■■□□□ 1.19
TRIM41-206ENST00000514219 BCANQ96GW7 911 aa22.5■■□□□ 1.19
TRIM41-206ENST00000514219 GPRASP1Q5JY77 1395 aa22.5■■□□□ 1.19
TRIM41-206ENST00000514219 CDK12Q9NYV4 1490 aaPredicted RBP22.49■■□□□ 1.19
TRIM41-206ENST00000514219 RXRBP28702 533 aa22.49■■□□□ 1.19
TRIM41-206ENST00000514219 EIF3AQ14152 1382 aaKnown RBP22.49■■□□□ 1.19
TRIM41-206ENST00000514219 DIP2AQ14689 1571 aa22.48■■□□□ 1.19
TRIM41-206ENST00000514219 PLEKHG1Q9ULL1 1385 aa22.48■■□□□ 1.19
TRIM41-206ENST00000514219 SLC24A1O60721 1099 aa22.46■■□□□ 1.19
TRIM41-206ENST00000514219 NBPF8Q3BBV2 869 aa22.46■■□□□ 1.19
TRIM41-206ENST00000514219 ADGRF5Q8IZF2 1346 aa22.46■■□□□ 1.19
TRIM41-206ENST00000514219 NCOA3Q9Y6Q9 1424 aa22.46■■□□□ 1.19
TRIM41-206ENST00000514219 EIF4G2P78344 907 aaKnown RBP eCLIP22.45■■□□□ 1.18
TRIM41-206ENST00000514219 CARD11Q9BXL7 1154 aa22.45■■□□□ 1.18
TRIM41-206ENST00000514219 C14orf93Q9H972 538 aaKnown RBP22.44■■□□□ 1.18
TRIM41-206ENST00000514219 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.43■■□□□ 1.18
TRIM41-206ENST00000514219 C14orf37Q86TY3 774 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms