RNA–Protein interactions for RNA: ENST00000514033.1

KLF3-203, Transcript of Kruppel like factor 3, humanhuman

TSL 1 (best) BASIC

Gene KLF3, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-203ENST00000514033 REREQ9P2R6 1566 aa30.07■■■□□ 2.4
KLF3-203ENST00000514033 NRXN1Q9ULB1 1477 aa30.07■■■□□ 2.4
KLF3-203ENST00000514033 ADGRF5Q8IZF2 1346 aa30.06■■■□□ 2.4
KLF3-203ENST00000514033 TMF1P82094 1093 aa30.06■■■□□ 2.4
KLF3-203ENST00000514033 CFAP65Q6ZU64 1925 aaKnown RBP30.05■■■□□ 2.4
KLF3-203ENST00000514033 CHGAP10645 457 aaKnown RBP30.05■■■□□ 2.4
KLF3-203ENST00000514033 SYNMO15061 1565 aa30.05■■■□□ 2.4
KLF3-203ENST00000514033 MRS2Q9HD23 443 aa30.04■■■□□ 2.4
KLF3-203ENST00000514033 PIK3C2BO00750 1634 aa30.04■■■□□ 2.4
KLF3-203ENST00000514033 AGLP35573 1532 aa30.01■■■□□ 2.4
KLF3-203ENST00000514033 CFAP70Q5T0N1 1121 aa30■■■□□ 2.39
KLF3-203ENST00000514033 RPGRIP1LQ68CZ1 1315 aa30■■■□□ 2.39
KLF3-203ENST00000514033 PPLO60437 1756 aa30■■■□□ 2.39
KLF3-203ENST00000514033 EIF3AQ14152 1382 aaKnown RBP30■■■□□ 2.39
KLF3-203ENST00000514033 KTN1Q86UP2 1357 aaKnown RBP29.96■■■□□ 2.39
KLF3-203ENST00000514033 HNRNPUQ00839 825 aaKnown RBP eCLIP29.95■■■□□ 2.38
KLF3-203ENST00000514033 CNGB1Q14028 1251 aaPredicted RBP29.93■■■□□ 2.38
KLF3-203ENST00000514033 PREX1Q8TCU6 1659 aa29.93■■■□□ 2.38
KLF3-203ENST00000514033 PIK3C2GO75747 1445 aa29.93■■■□□ 2.38
KLF3-203ENST00000514033 SLC52A1Q9NWF4 448 aa29.92■■■□□ 2.38
KLF3-203ENST00000514033 PPP6R1Q9UPN7 881 aa29.92■■■□□ 2.38
KLF3-203ENST00000514033 SETBP1Q9Y6X0 1596 aa29.92■■■□□ 2.38
KLF3-203ENST00000514033 ARHGEF40Q8TER5 1519 aa29.91■■■□□ 2.38
KLF3-203ENST00000514033 FAM9BQ8IZU0 186 aa29.91■■■□□ 2.38
KLF3-203ENST00000514033 RALBP1Q15311 655 aa29.9■■■□□ 2.38
KLF3-203ENST00000514033 PER1O15534 1290 aaPredicted RBP29.89■■■□□ 2.37
KLF3-203ENST00000514033 IDI1Q13907 227 aa29.89■■■□□ 2.37
KLF3-203ENST00000514033 CDCA8Q53HL2 280 aa29.89■■■□□ 2.37
KLF3-203ENST00000514033 NEXMIFQ5QGS0 1516 aa29.87■■■□□ 2.37
KLF3-203ENST00000514033 C14orf93Q9H972 538 aaKnown RBP29.87■■■□□ 2.37
KLF3-203ENST00000514033 SLC24A1O60721 1099 aa29.85■■■□□ 2.37
KLF3-203ENST00000514033 PANK3Q9H999 370 aa29.85■■■□□ 2.37
KLF3-203ENST00000514033 MYBBP1AQ9BQG0 1328 aaKnown RBP29.84■■■□□ 2.37
KLF3-203ENST00000514033 ERVK-7P63135 1459 aa29.83■■■□□ 2.37
KLF3-203ENST00000514033 VGFO15240 615 aaPredicted RBP29.82■■■□□ 2.37
KLF3-203ENST00000514033 MYO3AQ8NEV4 1616 aa29.82■■■□□ 2.37
KLF3-203ENST00000514033 PARD3Q8TEW0 1356 aa29.82■■■□□ 2.36
KLF3-203ENST00000514033 ADGRB1O14514 1584 aa29.81■■■□□ 2.36
KLF3-203ENST00000514033 CLTCQ00610 1675 aaKnown RBP29.8■■■□□ 2.36
KLF3-203ENST00000514033 BRD4O60885 1362 aaPredicted RBP29.79■■■□□ 2.36
KLF3-203ENST00000514033 TMEM131LA2VDJ0 1609 aa29.79■■■□□ 2.36
KLF3-203ENST00000514033 FBXO31Q5XUX0 539 aaPredicted RBP29.79■■■□□ 2.36
KLF3-203ENST00000514033 ZFYVE9O95405 1425 aa29.78■■■□□ 2.36
KLF3-203ENST00000514033 TMC1Q8TDI8 760 aa29.78■■■□□ 2.36
KLF3-203ENST00000514033 SBNO2Q9Y2G9 1366 aa29.77■■■□□ 2.36
KLF3-203ENST00000514033 KDM5AP29375 1690 aaKnown RBP29.76■■■□□ 2.36
KLF3-203ENST00000514033 CENPJQ9HC77 1338 aaPredicted RBP29.73■■■□□ 2.35
KLF3-203ENST00000514033 NUTM2DQ5VT03 806 aaPredicted RBP29.73■■■□□ 2.35
KLF3-203ENST00000514033 PNISRQ8TF01 805 aaKnown RBP29.73■■■□□ 2.35
KLF3-203ENST00000514033 MYO5BQ9ULV0 1848 aa29.73■■■□□ 2.35
KLF3-203ENST00000514033 MLECQ14165 292 aa29.72■■■□□ 2.35
KLF3-203ENST00000514033 MYOM1P52179 1685 aa29.72■■■□□ 2.35
KLF3-203ENST00000514033 SUPT16HQ9Y5B9 1047 aaKnown RBP29.72■■■□□ 2.35
KLF3-203ENST00000514033 SPATA31D1Q6ZQQ2 1576 aa29.71■■■□□ 2.35
KLF3-203ENST00000514033 ZBED9Q6R2W3 1325 aa29.71■■■□□ 2.35
KLF3-203ENST00000514033 NLRP13Q86W25 1043 aa29.71■■■□□ 2.35
KLF3-203ENST00000514033 TRAK1Q9UPV9 953 aa29.71■■■□□ 2.35
KLF3-203ENST00000514033 TMEM132EQ6IEE7 984 aa29.7■■■□□ 2.35
KLF3-203ENST00000514033 CC2D1BQ5T0F9 858 aaKnown RBP29.69■■■□□ 2.34
KLF3-203ENST00000514033 KNSTRNQ9Y448 316 aa29.66■■■□□ 2.34
KLF3-203ENST00000514033 QRICH2Q9H0J4 1663 aa29.65■■■□□ 2.34
KLF3-203ENST00000514033 LRPPRCP42704 1394 aaKnown RBP29.65■■■□□ 2.34
KLF3-203ENST00000514033 ESF1Q9H501 851 aaKnown RBP29.61■■■□□ 2.33
KLF3-203ENST00000514033 STAG3Q9UJ98 1225 aa29.61■■■□□ 2.33
KLF3-203ENST00000514033 ASXL1Q8IXJ9 1541 aa29.6■■■□□ 2.33
KLF3-203ENST00000514033 AMER1Q5JTC6 1135 aaPredicted RBP29.59■■■□□ 2.33
KLF3-203ENST00000514033 ARHGEF28Q8N1W1 1705 aaKnown RBP29.59■■■□□ 2.33
KLF3-203ENST00000514033 A2ML1A8K2U0 1454 aa29.58■■■□□ 2.33
KLF3-203ENST00000514033 ZMYM3Q14202 1370 aa29.58■■■□□ 2.33
KLF3-203ENST00000514033 NPC1L1Q9UHC9 1359 aa29.57■■■□□ 2.32
KLF3-203ENST00000514033 NEFLP07196 543 aa29.57■■■□□ 2.32
KLF3-203ENST00000514033 FKBP8Q14318 412 aa29.54■■■□□ 2.32
KLF3-203ENST00000514033 ALKQ9UM73 1620 aa29.5■■■□□ 2.31
KLF3-203ENST00000514033 RIMS2Q9UQ26 1411 aa29.5■■■□□ 2.31
KLF3-203ENST00000514033 PUS7Q96PZ0 661 aaKnown RBP29.48■■■□□ 2.31
KLF3-203ENST00000514033 EVC2Q86UK5 1308 aa29.47■■■□□ 2.31
KLF3-203ENST00000514033 PPP2R1AP30153 589 aa29.47■■■□□ 2.31
KLF3-203ENST00000514033 SENP3Q9H4L4 574 aaPredicted RBP29.47■■■□□ 2.31
KLF3-203ENST00000514033 TULP4Q9NRJ4 1543 aa29.47■■■□□ 2.31
KLF3-203ENST00000514033 YTHDC2Q9H6S0 1430 aaKnown RBP29.47■■■□□ 2.31
KLF3-203ENST00000514033 CARD14Q9BXL6 1004 aa29.46■■■□□ 2.31
KLF3-203ENST00000514033 STK26Q9P289 416 aa29.46■■■□□ 2.31
KLF3-203ENST00000514033 PTPRMP28827 1452 aa29.45■■■□□ 2.3
KLF3-203ENST00000514033 INSRP06213 1382 aa29.45■■■□□ 2.3
KLF3-203ENST00000514033 TNRQ92752 1358 aa29.45■■■□□ 2.3
KLF3-203ENST00000514033 SMG6Q86US8 1419 aaKnown RBP29.42■■■□□ 2.3
KLF3-203ENST00000514033 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.4■■■□□ 2.3
KLF3-203ENST00000514033 SLC12A5Q9H2X9 1139 aa29.4■■■□□ 2.3
KLF3-203ENST00000514033 SAFB2Q14151 953 aaKnown RBP eCLIP29.38■■■□□ 2.29
KLF3-203ENST00000514033 BLMP54132 1417 aaPredicted RBP29.37■■■□□ 2.29
KLF3-203ENST00000514033 PRAM1Q96QH2 718 aa29.36■■■□□ 2.29
KLF3-203ENST00000514033 NSD3Q9BZ95 1437 aa29.36■■■□□ 2.29
KLF3-203ENST00000514033 ADAMTSL3P82987 1691 aa29.36■■■□□ 2.29
KLF3-203ENST00000514033 SETD1AO15047 1707 aaKnown RBP29.35■■■□□ 2.29
KLF3-203ENST00000514033 POGKQ9P215 609 aa29.35■■■□□ 2.29
KLF3-203ENST00000514033 NUDCQ9Y266 331 aa29.35■■■□□ 2.29
KLF3-203ENST00000514033 FER1L4A9Z1Z3 1794 aa29.34■■■□□ 2.29
KLF3-203ENST00000514033 BCANQ96GW7 911 aa29.34■■■□□ 2.29
KLF3-203ENST00000514033 DLC1Q96QB1 1528 aa29.33■■■□□ 2.29
KLF3-203ENST00000514033 SENP3-EIF4A1A0A087X0R7 540 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms