RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 CCER1Q8TC90 406 aaPredicted RBP14.83□□□□□ -0.04
NEDD9-214ENST00000513989 TET3O43151 1660 aa14.83□□□□□ -0.04
NEDD9-214ENST00000513989 TMEM2Q9UHN6 1383 aa14.82□□□□□ -0.04
NEDD9-214ENST00000513989 ADGRB3O60242 1522 aa14.82□□□□□ -0.04
NEDD9-214ENST00000513989 TOM1O60784 492 aa14.81□□□□□ -0.04
NEDD9-214ENST00000513989 UNC13BO14795 1591 aa14.81□□□□□ -0.04
NEDD9-214ENST00000513989 IDI1Q13907 227 aa14.79□□□□□ -0.04
NEDD9-214ENST00000513989 FOXD1Q16676 465 aa14.79□□□□□ -0.04
NEDD9-214ENST00000513989 TXNDC2Q86VQ3 553 aa14.79□□□□□ -0.04
NEDD9-214ENST00000513989 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
NEDD9-214ENST00000513989 E9PCH4 1651 aa14.78□□□□□ -0.04
NEDD9-214ENST00000513989 SLC52A1Q9NWF4 448 aa14.77□□□□□ -0.05
NEDD9-214ENST00000513989 TMEM131LA2VDJ0 1609 aa14.77□□□□□ -0.05
NEDD9-214ENST00000513989 NWD1Q149M9 1564 aa14.77□□□□□ -0.05
NEDD9-214ENST00000513989 RPRD2Q5VT52 1461 aaKnown RBP14.76□□□□□ -0.05
NEDD9-214ENST00000513989 DHX57Q6P158 1386 aaKnown RBP14.76□□□□□ -0.05
NEDD9-214ENST00000513989 CHD2O14647 1828 aaKnown RBP14.76□□□□□ -0.05
NEDD9-214ENST00000513989 CLSPNQ9HAW4 1339 aa14.76□□□□□ -0.05
NEDD9-214ENST00000513989 IQGAP3Q86VI3 1631 aa14.74□□□□□ -0.05
NEDD9-214ENST00000513989 ZFYVE9O95405 1425 aa14.74□□□□□ -0.05
NEDD9-214ENST00000513989 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
NEDD9-214ENST00000513989 EID1Q9Y6B2 187 aa14.72□□□□□ -0.05
NEDD9-214ENST00000513989 ANKRD30BQ9BXX2 1392 aa14.71□□□□□ -0.06
NEDD9-214ENST00000513989 ROBO1Q9Y6N7 1651 aa14.71□□□□□ -0.06
NEDD9-214ENST00000513989 NEUROD1Q13562 356 aa14.7□□□□□ -0.06
NEDD9-214ENST00000513989 CHGAP10645 457 aaKnown RBP14.69□□□□□ -0.06
NEDD9-214ENST00000513989 SLC26A8Q96RN1 970 aa14.69□□□□□ -0.06
NEDD9-214ENST00000513989 TMEM94Q12767 1356 aa14.69□□□□□ -0.06
NEDD9-214ENST00000513989 NKTRP30414 1462 aaKnown RBP14.69□□□□□ -0.06
NEDD9-214ENST00000513989 CCDC144AA2RUR9 1427 aa14.68□□□□□ -0.06
NEDD9-214ENST00000513989 KCNA6P17658 529 aa14.67□□□□□ -0.06
NEDD9-214ENST00000513989 HDGFP51858 240 aaKnown RBP14.67□□□□□ -0.06
NEDD9-214ENST00000513989 RBM33Q96EV2 1170 aaKnown RBP14.66□□□□□ -0.06
NEDD9-214ENST00000513989 SIN3AQ96ST3 1273 aa14.66□□□□□ -0.06
NEDD9-214ENST00000513989 SPHKAPQ2M3C7 1700 aa14.66□□□□□ -0.06
NEDD9-214ENST00000513989 FAM135BQ49AJ0 1406 aa14.66□□□□□ -0.06
NEDD9-214ENST00000513989 RIMS2Q9UQ26 1411 aa14.66□□□□□ -0.06
NEDD9-214ENST00000513989 PLEKHG1Q9ULL1 1385 aa14.65□□□□□ -0.06
NEDD9-214ENST00000513989 NRXN3Q9Y4C0 1643 aa14.64□□□□□ -0.07
NEDD9-214ENST00000513989 ZNF326Q5BKZ1 582 aaKnown RBP14.64□□□□□ -0.07
NEDD9-214ENST00000513989 TIMELESSQ9UNS1 1208 aa14.64□□□□□ -0.07
NEDD9-214ENST00000513989 RGL3Q3MIN7 710 aa14.63□□□□□ -0.07
NEDD9-214ENST00000513989 ADAMTS13Q76LX8 1427 aa14.63□□□□□ -0.07
NEDD9-214ENST00000513989 PHLPP1O60346 1717 aa14.62□□□□□ -0.07
NEDD9-214ENST00000513989 STAC3Q96MF2 364 aa14.62□□□□□ -0.07
NEDD9-214ENST00000513989 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.61□□□□□ -0.07
NEDD9-214ENST00000513989 DIP2AQ14689 1571 aa14.61□□□□□ -0.07
NEDD9-214ENST00000513989 PROSER2Q86WR7 435 aaPredicted RBP14.61□□□□□ -0.07
NEDD9-214ENST00000513989 RPGRIP1LQ68CZ1 1315 aa14.61□□□□□ -0.07
NEDD9-214ENST00000513989 RGS17Q9UGC6 210 aaPredicted RBP14.6□□□□□ -0.07
NEDD9-214ENST00000513989 ZEB1P37275 1124 aaPredicted RBP14.59□□□□□ -0.07
NEDD9-214ENST00000513989 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.59□□□□□ -0.07
NEDD9-214ENST00000513989 TRPM2O94759 1503 aa14.59□□□□□ -0.07
NEDD9-214ENST00000513989 COL16A1Q07092 1604 aaPredicted RBP14.59□□□□□ -0.07
NEDD9-214ENST00000513989 TONSLQ96HA7 1378 aa14.59□□□□□ -0.07
NEDD9-214ENST00000513989 XRN1Q8IZH2 1706 aaKnown RBP14.58□□□□□ -0.07
NEDD9-214ENST00000513989 VGFO15240 615 aaPredicted RBP14.58□□□□□ -0.08
NEDD9-214ENST00000513989 CLTCL1P53675 1640 aa14.57□□□□□ -0.08
NEDD9-214ENST00000513989 NUTM2DQ5VT03 806 aaPredicted RBP14.57□□□□□ -0.08
NEDD9-214ENST00000513989 DCAF11Q8TEB1 546 aa14.56□□□□□ -0.08
NEDD9-214ENST00000513989 TBX22Q9Y458 520 aa14.56□□□□□ -0.08
NEDD9-214ENST00000513989 PTPRUQ92729 1446 aa14.56□□□□□ -0.08
NEDD9-214ENST00000513989 SETBP1Q9Y6X0 1596 aa14.56□□□□□ -0.08
NEDD9-214ENST00000513989 KIF1BO60333 1816 aa14.55□□□□□ -0.08
NEDD9-214ENST00000513989 PPP1R15AO75807 674 aaPredicted RBP14.55□□□□□ -0.08
NEDD9-214ENST00000513989 L3MBTL2Q969R5 705 aa14.55□□□□□ -0.08
NEDD9-214ENST00000513989 MSH6P52701 1360 aa14.55□□□□□ -0.08
NEDD9-214ENST00000513989 BCANQ96GW7 911 aa14.54□□□□□ -0.08
NEDD9-214ENST00000513989 KDM2AQ9Y2K7 1162 aa14.54□□□□□ -0.08
NEDD9-214ENST00000513989 SETD1AO15047 1707 aaKnown RBP14.53□□□□□ -0.08
NEDD9-214ENST00000513989 NCOA3Q9Y6Q9 1424 aa14.53□□□□□ -0.08
NEDD9-214ENST00000513989 SLAIN2Q9P270 581 aa14.53□□□□□ -0.08
NEDD9-214ENST00000513989 NEXMIFQ5QGS0 1516 aa14.52□□□□□ -0.08
NEDD9-214ENST00000513989 PIK3R4Q99570 1358 aa14.52□□□□□ -0.08
NEDD9-214ENST00000513989 AHDC1Q5TGY3 1603 aaPredicted RBP14.52□□□□□ -0.09
NEDD9-214ENST00000513989 SPATA31E1Q6ZUB1 1445 aa14.51□□□□□ -0.09
NEDD9-214ENST00000513989 SHPRHQ149N8 1683 aa14.51□□□□□ -0.09
NEDD9-214ENST00000513989 NALCNQ8IZF0 1738 aa14.5□□□□□ -0.09
NEDD9-214ENST00000513989 LRP6O75581 1613 aa14.48□□□□□ -0.09
NEDD9-214ENST00000513989 POTEAQ6S8J7 498 aa14.48□□□□□ -0.09
NEDD9-214ENST00000513989 NHSL1Q5SYE7 1610 aa14.48□□□□□ -0.09
NEDD9-214ENST00000513989 PPLO60437 1756 aa14.47□□□□□ -0.09
NEDD9-214ENST00000513989 METP08581 1390 aa14.47□□□□□ -0.09
NEDD9-214ENST00000513989 AMOTL2Q9Y2J4 779 aa14.46□□□□□ -0.09
NEDD9-214ENST00000513989 JCADQ9P266 1359 aa14.46□□□□□ -0.1
NEDD9-214ENST00000513989 C19orf44Q9H6X5 657 aa14.45□□□□□ -0.1
NEDD9-214ENST00000513989 DCCP43146 1447 aa14.44□□□□□ -0.1
NEDD9-214ENST00000513989 ADGRF5Q8IZF2 1346 aa14.43□□□□□ -0.1
NEDD9-214ENST00000513989 MST1RQ04912 1400 aa14.43□□□□□ -0.1
NEDD9-214ENST00000513989 ASXL1Q8IXJ9 1541 aa14.43□□□□□ -0.1
NEDD9-214ENST00000513989 CADPS2Q86UW7 1296 aa14.42□□□□□ -0.1
NEDD9-214ENST00000513989 C14orf37Q86TY3 774 aa14.41□□□□□ -0.1
NEDD9-214ENST00000513989 C14orf93Q9H972 538 aaKnown RBP14.41□□□□□ -0.1
NEDD9-214ENST00000513989 IFT172Q9UG01 1749 aa14.41□□□□□ -0.1
NEDD9-214ENST00000513989 LAMC1P11047 1609 aa14.41□□□□□ -0.1
NEDD9-214ENST00000513989 BRINP3Q76B58 766 aa14.4□□□□□ -0.1
NEDD9-214ENST00000513989 ADGRL3Q9HAR2 1447 aa14.4□□□□□ -0.1
NEDD9-214ENST00000513989 ATF3P18847 181 aa14.39□□□□□ -0.11
NEDD9-214ENST00000513989 NBPF8Q3BBV2 869 aa14.38□□□□□ -0.11
NEDD9-214ENST00000513989 CFAP70Q5T0N1 1121 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms