RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 TCP11L2Q8N4U5 519 aa9.59□□□□□ -0.87
CLCN3-209ENST00000513761 NGEFQ8N5V2 710 aa9.59□□□□□ -0.87
CLCN3-209ENST00000513761 HMMRO75330 724 aa9.59□□□□□ -0.87
CLCN3-209ENST00000513761 RIPK4P57078 832 aa9.59□□□□□ -0.87
CLCN3-209ENST00000513761 R3HCC1Q9Y3T6 440 aaKnown RBP9.59□□□□□ -0.87
CLCN3-209ENST00000513761 NRDCO43847 1150 aa9.58□□□□□ -0.88
CLCN3-209ENST00000513761 NCAPD3P42695 1498 aa9.58□□□□□ -0.88
CLCN3-209ENST00000513761 PDE3AQ14432 1141 aa9.58□□□□□ -0.88
CLCN3-209ENST00000513761 RILPL2Q969X0 211 aa9.58□□□□□ -0.88
CLCN3-209ENST00000513761 EHBP1L1Q8N3D4 1523 aa9.58□□□□□ -0.88
CLCN3-209ENST00000513761 ANKRD30BQ9BXX2 1392 aa9.58□□□□□ -0.88
CLCN3-209ENST00000513761 EFCAB5A4FU69 1503 aa9.57□□□□□ -0.88
CLCN3-209ENST00000513761 PHF14O94880 888 aa9.57□□□□□ -0.88
CLCN3-209ENST00000513761 PRDM2Q13029 1718 aa9.57□□□□□ -0.88
CLCN3-209ENST00000513761 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.57□□□□□ -0.88
CLCN3-209ENST00000513761 MLECQ14165 292 aa9.57□□□□□ -0.88
CLCN3-209ENST00000513761 WASHC2CQ9Y4E1 1318 aa9.57□□□□□ -0.88
CLCN3-209ENST00000513761 MTHFSP49914 203 aa9.56□□□□□ -0.88
CLCN3-209ENST00000513761 PKNOX2Q96KN3 472 aa9.56□□□□□ -0.88
CLCN3-209ENST00000513761 MCM4P33991 863 aa9.56□□□□□ -0.88
CLCN3-209ENST00000513761 RNF214Q8ND24 703 aa9.56□□□□□ -0.88
CLCN3-209ENST00000513761 STK31Q9BXU1 1019 aa9.56□□□□□ -0.88
CLCN3-209ENST00000513761 RBM10P98175 930 aaKnown RBP9.56□□□□□ -0.88
CLCN3-209ENST00000513761 LMOD2Q6P5Q4 547 aa9.56□□□□□ -0.88
CLCN3-209ENST00000513761 DAPK1P53355 1430 aa9.56□□□□□ -0.88
CLCN3-209ENST00000513761 CAVIN1Q6NZI2 390 aaKnown RBP9.56□□□□□ -0.88
CLCN3-209ENST00000513761 GRPEL1Q9HAV7 217 aa9.56□□□□□ -0.88
CLCN3-209ENST00000513761 TSR2Q969E8 191 aaKnown RBP9.55□□□□□ -0.88
CLCN3-209ENST00000513761 AQRO60306 1485 aaKnown RBP eCLIP9.55□□□□□ -0.88
CLCN3-209ENST00000513761 SLFN5Q08AF3 891 aa9.54□□□□□ -0.88
CLCN3-209ENST00000513761 EXOSC9Q06265 439 aaKnown RBP9.54□□□□□ -0.88
CLCN3-209ENST00000513761 AAMPQ13685 434 aa9.54□□□□□ -0.88
CLCN3-209ENST00000513761 EVC2Q86UK5 1308 aa9.54□□□□□ -0.88
CLCN3-209ENST00000513761 NUCB2P80303 420 aa9.54□□□□□ -0.88
CLCN3-209ENST00000513761 C1orf115Q9H7X2 142 aa9.54□□□□□ -0.88
CLCN3-209ENST00000513761 MINK1Q8N4C8 1332 aaPredicted RBP9.54□□□□□ -0.88
CLCN3-209ENST00000513761 A0A0G2JS52 829 aa9.54□□□□□ -0.88
CLCN3-209ENST00000513761 CFAP70Q5T0N1 1121 aa9.54□□□□□ -0.88
CLCN3-209ENST00000513761 DIAPH1O60610 1272 aaKnown RBP9.54□□□□□ -0.88
CLCN3-209ENST00000513761 LMOD3Q0VAK6 560 aa9.54□□□□□ -0.88
CLCN3-209ENST00000513761 GGNBP2Q9H3C7 697 aa9.54□□□□□ -0.88
CLCN3-209ENST00000513761 SUPT6HQ7KZ85 1726 aaKnown RBP9.53□□□□□ -0.88
CLCN3-209ENST00000513761 KIF16BQ96L93 1317 aa9.53□□□□□ -0.88
CLCN3-209ENST00000513761 MAP3K1Q13233 1512 aa9.53□□□□□ -0.88
CLCN3-209ENST00000513761 REC8O95072 547 aa9.53□□□□□ -0.88
CLCN3-209ENST00000513761 CHMP3Q9Y3E7 222 aa9.53□□□□□ -0.88
CLCN3-209ENST00000513761 PTPRKQ15262 1439 aa9.53□□□□□ -0.88
CLCN3-209ENST00000513761 ESPNB1AK53 854 aa9.53□□□□□ -0.88
CLCN3-209ENST00000513761 PRG4Q92954 1404 aaPredicted RBP9.53□□□□□ -0.88
CLCN3-209ENST00000513761 NUTM2FA1L443 756 aa9.52□□□□□ -0.88
CLCN3-209ENST00000513761 TMEM132EQ6IEE7 984 aa9.52□□□□□ -0.88
CLCN3-209ENST00000513761 ERBINQ96RT1 1412 aa9.52□□□□□ -0.88
CLCN3-209ENST00000513761 HMOX1P09601 288 aa9.52□□□□□ -0.89
CLCN3-209ENST00000513761 PTPN23Q9H3S7 1636 aa9.52□□□□□ -0.89
CLCN3-209ENST00000513761 CDK13Q14004 1512 aaKnown RBP9.52□□□□□ -0.89
CLCN3-209ENST00000513761 CSPP1Q1MSJ5 1256 aa9.52□□□□□ -0.89
CLCN3-209ENST00000513761 PTPRGP23470 1445 aa9.52□□□□□ -0.89
CLCN3-209ENST00000513761 PRPF40AO75400 957 aaKnown RBP9.51□□□□□ -0.89
CLCN3-209ENST00000513761 ANO2Q9NQ90 1003 aa9.51□□□□□ -0.89
CLCN3-209ENST00000513761 NOB1Q9ULX3 412 aaKnown RBP9.51□□□□□ -0.89
CLCN3-209ENST00000513761 CDC45O75419 566 aa9.51□□□□□ -0.89
CLCN3-209ENST00000513761 INTS3Q68E01 1043 aaKnown RBP9.51□□□□□ -0.89
CLCN3-209ENST00000513761 TPM2P07951 284 aa9.51□□□□□ -0.89
CLCN3-209ENST00000513761 MPNDQ8N594 471 aa9.5□□□□□ -0.89
CLCN3-209ENST00000513761 C9orf84Q5VXU9 1444 aa9.5□□□□□ -0.89
CLCN3-209ENST00000513761 DUSP27Q5VZP5 1158 aa9.5□□□□□ -0.89
CLCN3-209ENST00000513761 SLC12A5Q9H2X9 1139 aa9.5□□□□□ -0.89
CLCN3-209ENST00000513761 CABP2Q9NPB3 220 aa9.5□□□□□ -0.89
CLCN3-209ENST00000513761 CCDC173Q0VFZ6 552 aa9.5□□□□□ -0.89
CLCN3-209ENST00000513761 TBC1D2Q9BYX2 928 aa9.5□□□□□ -0.89
CLCN3-209ENST00000513761 BCL11BQ9C0K0 894 aaPredicted RBP9.5□□□□□ -0.89
CLCN3-209ENST00000513761 HSP90B1P14625 803 aaKnown RBP9.5□□□□□ -0.89
CLCN3-209ENST00000513761 MVPQ14764 893 aaKnown RBP9.5□□□□□ -0.89
CLCN3-209ENST00000513761 API5Q9BZZ5 524 aaKnown RBP9.5□□□□□ -0.89
CLCN3-209ENST00000513761 WWC1Q8IX03 1113 aa9.5□□□□□ -0.89
CLCN3-209ENST00000513761 ZNF592Q92610 1267 aa9.5□□□□□ -0.89
CLCN3-209ENST00000513761 RPRD2Q5VT52 1461 aaKnown RBP9.49□□□□□ -0.89
CLCN3-209ENST00000513761 NECTIN2Q92692 538 aa9.49□□□□□ -0.89
CLCN3-209ENST00000513761 POLA1P09884 1462 aaPredicted RBP9.49□□□□□ -0.89
CLCN3-209ENST00000513761 HTATSF1O43719 755 aaKnown RBP9.49□□□□□ -0.89
CLCN3-209ENST00000513761 IGHDP01880 384 aa9.49□□□□□ -0.89
CLCN3-209ENST00000513761 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.49□□□□□ -0.89
CLCN3-209ENST00000513761 ROCK1Q13464 1354 aa9.48□□□□□ -0.89
CLCN3-209ENST00000513761 EPRSP07814 1512 aaKnown RBP9.48□□□□□ -0.89
CLCN3-209ENST00000513761 ZNF771Q7L3S4 317 aaPredicted RBP9.48□□□□□ -0.89
CLCN3-209ENST00000513761 ABCC5O15440 1437 aa9.47□□□□□ -0.89
CLCN3-209ENST00000513761 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
CLCN3-209ENST00000513761 CCDC39Q9UFE4 941 aa9.47□□□□□ -0.89
CLCN3-209ENST00000513761 ATP6V1DQ9Y5K8 247 aa9.47□□□□□ -0.89
CLCN3-209ENST00000513761 RRP9O43818 475 aaKnown RBP9.47□□□□□ -0.89
CLCN3-209ENST00000513761 GNL2Q13823 731 aaKnown RBP9.47□□□□□ -0.89
CLCN3-209ENST00000513761 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
CLCN3-209ENST00000513761 NESP48681 1621 aa9.47□□□□□ -0.89
CLCN3-209ENST00000513761 VGFO15240 615 aaPredicted RBP9.47□□□□□ -0.89
CLCN3-209ENST00000513761 ATF7IPQ6VMQ6 1270 aa9.47□□□□□ -0.89
CLCN3-209ENST00000513761 GPATCH3Q96I76 525 aa9.47□□□□□ -0.89
CLCN3-209ENST00000513761 NEK4P51957 841 aa9.46□□□□□ -0.89
CLCN3-209ENST00000513761 TOPBP1Q92547 1522 aa9.46□□□□□ -0.9
CLCN3-209ENST00000513761 VPS37CA5D8V6 355 aaPredicted RBP9.46□□□□□ -0.9
CLCN3-209ENST00000513761 GNAI1P63096 354 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms