RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 ERBINQ96RT1 1412 aa14.33□□□□□ -0.11
CAST-239ENST00000513666 SLC26A8Q96RN1 970 aa14.33□□□□□ -0.12
CAST-239ENST00000513666 MSH6P52701 1360 aa14.33□□□□□ -0.12
CAST-239ENST00000513666 KIF15Q9NS87 1388 aa14.33□□□□□ -0.12
CAST-239ENST00000513666 MYOM3Q5VTT5 1437 aa14.33□□□□□ -0.12
CAST-239ENST00000513666 SLAIN2Q9P270 581 aa14.32□□□□□ -0.12
CAST-239ENST00000513666 IDI1Q13907 227 aa14.31□□□□□ -0.12
CAST-239ENST00000513666 COL16A1Q07092 1604 aaPredicted RBP14.31□□□□□ -0.12
CAST-239ENST00000513666 UPF1Q92900 1129 aaKnown RBP eCLIP14.31□□□□□ -0.12
CAST-239ENST00000513666 KANK1Q14678 1352 aa14.3□□□□□ -0.12
CAST-239ENST00000513666 LMTK2Q8IWU2 1503 aa14.29□□□□□ -0.12
CAST-239ENST00000513666 CROCC2H7BZ55 1655 aa14.29□□□□□ -0.12
CAST-239ENST00000513666 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
CAST-239ENST00000513666 ADGRB3O60242 1522 aa14.29□□□□□ -0.12
CAST-239ENST00000513666 LRP6O75581 1613 aa14.29□□□□□ -0.12
CAST-239ENST00000513666 FGD6Q6ZV73 1430 aa14.27□□□□□ -0.12
CAST-239ENST00000513666 SPATA31A6Q5VVP1 1343 aa14.27□□□□□ -0.12
CAST-239ENST00000513666 ZNF772Q68DY9 489 aaPredicted RBP14.27□□□□□ -0.12
CAST-239ENST00000513666 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.12
CAST-239ENST00000513666 RRP7BPQ9NSQ0 103 aa14.27□□□□□ -0.12
CAST-239ENST00000513666 CHD2O14647 1828 aaKnown RBP14.27□□□□□ -0.13
CAST-239ENST00000513666 NOS1P29475 1434 aa14.27□□□□□ -0.13
CAST-239ENST00000513666 ABCC5O15440 1437 aa14.26□□□□□ -0.13
CAST-239ENST00000513666 KANK4Q5T7N3 995 aaPredicted RBP14.25□□□□□ -0.13
CAST-239ENST00000513666 MEX3CQ5U5Q3 659 aaKnown RBP14.25□□□□□ -0.13
CAST-239ENST00000513666 TRIM52Q96A61 297 aa14.25□□□□□ -0.13
CAST-239ENST00000513666 VPS8Q8N3P4 1428 aa14.24□□□□□ -0.13
CAST-239ENST00000513666 SHPRHQ149N8 1683 aa14.24□□□□□ -0.13
CAST-239ENST00000513666 BCANQ96GW7 911 aa14.24□□□□□ -0.13
CAST-239ENST00000513666 NCOA3Q9Y6Q9 1424 aa14.24□□□□□ -0.13
CAST-239ENST00000513666 AHDC1Q5TGY3 1603 aaPredicted RBP14.24□□□□□ -0.13
CAST-239ENST00000513666 PLEKHG1Q9ULL1 1385 aa14.23□□□□□ -0.13
CAST-239ENST00000513666 SLC52A1Q9NWF4 448 aa14.23□□□□□ -0.13
CAST-239ENST00000513666 ZFYVE9O95405 1425 aa14.23□□□□□ -0.13
CAST-239ENST00000513666 CDK12Q9NYV4 1490 aaPredicted RBP14.22□□□□□ -0.13
CAST-239ENST00000513666 CAPN15O75808 1086 aa14.21□□□□□ -0.13
CAST-239ENST00000513666 DAPK1P53355 1430 aa14.21□□□□□ -0.13
CAST-239ENST00000513666 PTPN23Q9H3S7 1636 aa14.21□□□□□ -0.13
CAST-239ENST00000513666 RXRBP28702 533 aa14.2□□□□□ -0.14
CAST-239ENST00000513666 MYO5BQ9ULV0 1848 aa14.2□□□□□ -0.14
CAST-239ENST00000513666 APLP2Q06481 763 aa14.2□□□□□ -0.14
CAST-239ENST00000513666 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.19□□□□□ -0.14
CAST-239ENST00000513666 RIMS2Q9UQ26 1411 aa14.19□□□□□ -0.14
CAST-239ENST00000513666 DSG3P32926 999 aa14.19□□□□□ -0.14
CAST-239ENST00000513666 CADPS2Q86UW7 1296 aa14.18□□□□□ -0.14
CAST-239ENST00000513666 TBX22Q9Y458 520 aa14.18□□□□□ -0.14
CAST-239ENST00000513666 ANKRD30AQ9BXX3 1397 aa14.18□□□□□ -0.14
CAST-239ENST00000513666 RPRD2Q5VT52 1461 aaKnown RBP14.18□□□□□ -0.14
CAST-239ENST00000513666 DIP2AQ14689 1571 aa14.18□□□□□ -0.14
CAST-239ENST00000513666 GCC2Q8IWJ2 1684 aa14.18□□□□□ -0.14
CAST-239ENST00000513666 PPP1R15AO75807 674 aaPredicted RBP14.17□□□□□ -0.14
CAST-239ENST00000513666 HDGFP51858 240 aaKnown RBP14.17□□□□□ -0.14
CAST-239ENST00000513666 C14orf37Q86TY3 774 aa14.17□□□□□ -0.14
CAST-239ENST00000513666 C19orf44Q9H6X5 657 aa14.17□□□□□ -0.14
CAST-239ENST00000513666 TMEM131LA2VDJ0 1609 aa14.16□□□□□ -0.14
CAST-239ENST00000513666 ATF3P18847 181 aa14.15□□□□□ -0.14
CAST-239ENST00000513666 SAMD1Q6SPF0 538 aaPredicted RBP14.15□□□□□ -0.14
CAST-239ENST00000513666 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
CAST-239ENST00000513666 ADAMTS13Q76LX8 1427 aa14.15□□□□□ -0.14
CAST-239ENST00000513666 PIK3R4Q99570 1358 aa14.14□□□□□ -0.15
CAST-239ENST00000513666 BRINP3Q76B58 766 aa14.14□□□□□ -0.15
CAST-239ENST00000513666 AFF2P51816 1311 aa14.14□□□□□ -0.15
CAST-239ENST00000513666 NUTM2BA6NNL0 878 aaPredicted RBP14.13□□□□□ -0.15
CAST-239ENST00000513666 NUTM2EB1AL46 878 aaPredicted RBP14.13□□□□□ -0.15
CAST-239ENST00000513666 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
CAST-239ENST00000513666 NUTM2AQ8IVF1 878 aaPredicted RBP14.13□□□□□ -0.15
CAST-239ENST00000513666 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.13□□□□□ -0.15
CAST-239ENST00000513666 RGS12O14924 1447 aa14.12□□□□□ -0.15
CAST-239ENST00000513666 DCCP43146 1447 aa14.11□□□□□ -0.15
CAST-239ENST00000513666 SETD5Q9C0A6 1442 aa14.11□□□□□ -0.15
CAST-239ENST00000513666 ADGRL2O95490 1459 aa14.11□□□□□ -0.15
CAST-239ENST00000513666 ASXL1Q8IXJ9 1541 aa14.11□□□□□ -0.15
CAST-239ENST00000513666 TRPM2O94759 1503 aa14.1□□□□□ -0.15
CAST-239ENST00000513666 NHSL1Q5SYE7 1610 aa14.1□□□□□ -0.15
CAST-239ENST00000513666 RBM6P78332 1123 aaKnown RBP14.08□□□□□ -0.16
CAST-239ENST00000513666 NUTM2DQ5VT03 806 aaPredicted RBP14.08□□□□□ -0.16
CAST-239ENST00000513666 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
CAST-239ENST00000513666 PTPRUQ92729 1446 aa14.08□□□□□ -0.16
CAST-239ENST00000513666 CHGAP10645 457 aaKnown RBP14.07□□□□□ -0.16
CAST-239ENST00000513666 QTRT2Q9H974 415 aaKnown RBP14.07□□□□□ -0.16
CAST-239ENST00000513666 ANKRD50Q9ULJ7 1429 aa14.07□□□□□ -0.16
CAST-239ENST00000513666 AMOTL2Q9Y2J4 779 aa14.07□□□□□ -0.16
CAST-239ENST00000513666 MST1RQ04912 1400 aa14.06□□□□□ -0.16
CAST-239ENST00000513666 LRRC59Q96AG4 307 aaKnown RBP14.06□□□□□ -0.16
CAST-239ENST00000513666 SRCAPQ6ZRS2 3230 aa14.06□□□□□ -0.16
CAST-239ENST00000513666 UNC13BO14795 1591 aa14.06□□□□□ -0.16
CAST-239ENST00000513666 C8orf37Q96NL8 207 aa14.05□□□□□ -0.16
CAST-239ENST00000513666 FOXD4L1Q9NU39 408 aa14.05□□□□□ -0.16
CAST-239ENST00000513666 XRN1Q8IZH2 1706 aaKnown RBP14.05□□□□□ -0.16
CAST-239ENST00000513666 PNPLA6Q8IY17 1366 aa14.05□□□□□ -0.16
CAST-239ENST00000513666 E9PCH4 1651 aa14.05□□□□□ -0.16
CAST-239ENST00000513666 ATAD2Q6PL18 1390 aa14.02□□□□□ -0.16
CAST-239ENST00000513666 NGLY1Q96IV0 654 aa14.01□□□□□ -0.17
CAST-239ENST00000513666 NRXN3Q9Y4C0 1643 aa14.01□□□□□ -0.17
CAST-239ENST00000513666 LOC105371045A0A1W2PR82 267 aa14□□□□□ -0.17
CAST-239ENST00000513666 SETBP1Q9Y6X0 1596 aa14□□□□□ -0.17
CAST-239ENST00000513666 DDX17Q92841 729 aaKnown RBP14□□□□□ -0.17
CAST-239ENST00000513666 ADGRL3Q9HAR2 1447 aa13.99□□□□□ -0.17
CAST-239ENST00000513666 ZRANB1Q9UGI0 708 aa13.99□□□□□ -0.17
CAST-239ENST00000513666 IQGAP3Q86VI3 1631 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms