RNA–Protein interactions for RNA: ENST00000513027.3

RACK1-229, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-229ENST00000513027 CCER2I3L3R5 266 aa17.22■□□□□ 0.35
RACK1-229ENST00000513027 SCAF11Q99590 1463 aaKnown RBP17.22■□□□□ 0.35
RACK1-229ENST00000513027 MROH2AA6NES4 1674 aa17.22■□□□□ 0.35
RACK1-229ENST00000513027 PPLO60437 1756 aa17.22■□□□□ 0.35
RACK1-229ENST00000513027 CLTCQ00610 1675 aaKnown RBP17.21■□□□□ 0.35
RACK1-229ENST00000513027 SETBP1Q9Y6X0 1596 aa17.21■□□□□ 0.35
RACK1-229ENST00000513027 ST20-MTHFSA0A0A6YYL1 179 aa17.21■□□□□ 0.35
RACK1-229ENST00000513027 NBPF1Q3BBV0 1214 aa17.2■□□□□ 0.34
RACK1-229ENST00000513027 IDI1Q13907 227 aa17.19■□□□□ 0.34
RACK1-229ENST00000513027 CDCA8Q53HL2 280 aa17.19■□□□□ 0.34
RACK1-229ENST00000513027 IQGAP1P46940 1657 aa17.19■□□□□ 0.34
RACK1-229ENST00000513027 CFAP65Q6ZU64 1925 aaKnown RBP17.19■□□□□ 0.34
RACK1-229ENST00000513027 CENPBP07199 599 aaPredicted RBP17.18■□□□□ 0.34
RACK1-229ENST00000513027 CHGAP10645 457 aaKnown RBP17.18■□□□□ 0.34
RACK1-229ENST00000513027 PIK3C2GO75747 1445 aa17.18■□□□□ 0.34
RACK1-229ENST00000513027 TMEM131LA2VDJ0 1609 aa17.18■□□□□ 0.34
RACK1-229ENST00000513027 C11orf95C9JLR9 678 aaPredicted RBP17.17■□□□□ 0.34
RACK1-229ENST00000513027 ZMYM3Q14202 1370 aa17.16■□□□□ 0.34
RACK1-229ENST00000513027 TMF1P82094 1093 aa17.16■□□□□ 0.34
RACK1-229ENST00000513027 C14orf93Q9H972 538 aaKnown RBP17.16■□□□□ 0.34
RACK1-229ENST00000513027 NEXMIFQ5QGS0 1516 aa17.16■□□□□ 0.34
RACK1-229ENST00000513027 KDM5AP29375 1690 aaKnown RBP17.15■□□□□ 0.34
RACK1-229ENST00000513027 ADGRF5Q8IZF2 1346 aa17.15■□□□□ 0.34
RACK1-229ENST00000513027 HDGFP51858 240 aaKnown RBP17.13■□□□□ 0.33
RACK1-229ENST00000513027 TESK2Q96S53 571 aa17.13■□□□□ 0.33
RACK1-229ENST00000513027 SBNO2Q9Y2G9 1366 aa17.13■□□□□ 0.33
RACK1-229ENST00000513027 KTN1Q86UP2 1357 aaKnown RBP17.12■□□□□ 0.33
RACK1-229ENST00000513027 MLECQ14165 292 aa17.1■□□□□ 0.33
RACK1-229ENST00000513027 CFAP70Q5T0N1 1121 aa17.1■□□□□ 0.33
RACK1-229ENST00000513027 FBXO31Q5XUX0 539 aaPredicted RBP17.1■□□□□ 0.33
RACK1-229ENST00000513027 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.1■□□□□ 0.33
RACK1-229ENST00000513027 STAG3Q9UJ98 1225 aa17.1■□□□□ 0.33
RACK1-229ENST00000513027 MYO3AQ8NEV4 1616 aa17.09■□□□□ 0.33
RACK1-229ENST00000513027 A2ML1A8K2U0 1454 aa17.07■□□□□ 0.32
RACK1-229ENST00000513027 NLRP1Q9C000 1473 aa17.07■□□□□ 0.32
RACK1-229ENST00000513027 TNRQ92752 1358 aa17.07■□□□□ 0.32
RACK1-229ENST00000513027 ADGRB1O14514 1584 aa17.06■□□□□ 0.32
RACK1-229ENST00000513027 PUS7Q96PZ0 661 aaKnown RBP17.05■□□□□ 0.32
RACK1-229ENST00000513027 PRKRIP1Q9H875 184 aaPredicted RBP17.04■□□□□ 0.32
RACK1-229ENST00000513027 MYO5BQ9ULV0 1848 aa17.03■□□□□ 0.32
RACK1-229ENST00000513027 CENPJQ9HC77 1338 aaPredicted RBP17.01■□□□□ 0.31
RACK1-229ENST00000513027 FER1L4A9Z1Z3 1794 aa17.01■□□□□ 0.31
RACK1-229ENST00000513027 RIMS2Q9UQ26 1411 aa17.01■□□□□ 0.31
RACK1-229ENST00000513027 DISP3Q9P2K9 1392 aa17.01■□□□□ 0.31
RACK1-229ENST00000513027 RALBP1Q15311 655 aa16.99■□□□□ 0.31
RACK1-229ENST00000513027 POLR3GLQ9BT43 218 aa16.99■□□□□ 0.31
RACK1-229ENST00000513027 C3P01024 1663 aa16.97■□□□□ 0.31
RACK1-229ENST00000513027 ALKQ9UM73 1620 aa16.96■□□□□ 0.31
RACK1-229ENST00000513027 UBR1Q8IWV7 1749 aa16.96■□□□□ 0.3
RACK1-229ENST00000513027 TMEM2Q9UHN6 1383 aa16.95■□□□□ 0.3
RACK1-229ENST00000513027 DLC1Q96QB1 1528 aa16.94■□□□□ 0.3
RACK1-229ENST00000513027 NPC1L1Q9UHC9 1359 aa16.93■□□□□ 0.3
RACK1-229ENST00000513027 PER1O15534 1290 aaPredicted RBP16.93■□□□□ 0.3
RACK1-229ENST00000513027 SIRT1Q96EB6 747 aa16.93■□□□□ 0.3
RACK1-229ENST00000513027 TRAK1Q9UPV9 953 aa16.93■□□□□ 0.3
RACK1-229ENST00000513027 QRICH2Q9H0J4 1663 aa16.93■□□□□ 0.3
RACK1-229ENST00000513027 YTHDC2Q9H6S0 1430 aaKnown RBP16.93■□□□□ 0.3
RACK1-229ENST00000513027 ARHGEF28Q8N1W1 1705 aaKnown RBP16.93■□□□□ 0.3
RACK1-229ENST00000513027 YTHDC1Q96MU7 727 aaKnown RBP16.92■□□□□ 0.3
RACK1-229ENST00000513027 EVC2Q86UK5 1308 aa16.92■□□□□ 0.3
RACK1-229ENST00000513027 NINLQ9Y2I6 1382 aa16.91■□□□□ 0.3
RACK1-229ENST00000513027 TMEM132EQ6IEE7 984 aa16.91■□□□□ 0.3
RACK1-229ENST00000513027 THEMISQ8N1K5 641 aaPredicted RBP16.91■□□□□ 0.3
RACK1-229ENST00000513027 SLIT1O75093 1534 aa16.91■□□□□ 0.3
RACK1-229ENST00000513027 LRPPRCP42704 1394 aaKnown RBP16.9■□□□□ 0.3
RACK1-229ENST00000513027 ABCC11Q96J66 1382 aa16.9■□□□□ 0.3
RACK1-229ENST00000513027 PANK3Q9H999 370 aa16.9■□□□□ 0.3
RACK1-229ENST00000513027 EID1Q9Y6B2 187 aa16.9■□□□□ 0.3
RACK1-229ENST00000513027 ASXL1Q8IXJ9 1541 aa16.9■□□□□ 0.3
RACK1-229ENST00000513027 ADAMTSL3P82987 1691 aa16.89■□□□□ 0.29
RACK1-229ENST00000513027 ARHGAP23Q9P227 1491 aa16.89■□□□□ 0.29
RACK1-229ENST00000513027 NUTM2DQ5VT03 806 aaPredicted RBP16.89■□□□□ 0.29
RACK1-229ENST00000513027 KNSTRNQ9Y448 316 aa16.89■□□□□ 0.29
RACK1-229ENST00000513027 MYBBP1AQ9BQG0 1328 aaKnown RBP16.89■□□□□ 0.29
RACK1-229ENST00000513027 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.29
RACK1-229ENST00000513027 PARD3Q8TEW0 1356 aa16.89■□□□□ 0.29
RACK1-229ENST00000513027 PLEKHG1Q9ULL1 1385 aa16.89■□□□□ 0.29
RACK1-229ENST00000513027 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
RACK1-229ENST00000513027 PTPRMP28827 1452 aa16.87■□□□□ 0.29
RACK1-229ENST00000513027 MRS2Q9HD23 443 aa16.87■□□□□ 0.29
RACK1-229ENST00000513027 MYOM1P52179 1685 aa16.86■□□□□ 0.29
RACK1-229ENST00000513027 FAM135BQ49AJ0 1406 aa16.86■□□□□ 0.29
RACK1-229ENST00000513027 NLRP13Q86W25 1043 aa16.85■□□□□ 0.29
RACK1-229ENST00000513027 TECPR2O15040 1411 aa16.85■□□□□ 0.29
RACK1-229ENST00000513027 NRXN3Q9Y4C0 1643 aa16.85■□□□□ 0.29
RACK1-229ENST00000513027 KNDC1Q76NI1 1749 aa16.84■□□□□ 0.29
RACK1-229ENST00000513027 POGKQ9P215 609 aa16.84■□□□□ 0.29
RACK1-229ENST00000513027 ATAD2Q6PL18 1390 aa16.84■□□□□ 0.29
RACK1-229ENST00000513027 DIP2AQ14689 1571 aa16.84■□□□□ 0.29
RACK1-229ENST00000513027 CEBPAP49715 358 aaPredicted RBP16.83■□□□□ 0.28
RACK1-229ENST00000513027 SETD1BQ9UPS6 1966 aaKnown RBP16.83■□□□□ 0.28
RACK1-229ENST00000513027 RIMS1Q86UR5 1692 aaKnown RBP16.81■□□□□ 0.28
RACK1-229ENST00000513027 INSRP06213 1382 aa16.81■□□□□ 0.28
RACK1-229ENST00000513027 TXNDC2Q86VQ3 553 aa16.81■□□□□ 0.28
RACK1-229ENST00000513027 TMC1Q8TDI8 760 aa16.81■□□□□ 0.28
RACK1-229ENST00000513027 MED14O60244 1454 aa16.8■□□□□ 0.28
RACK1-229ENST00000513027 PRAM1Q96QH2 718 aa16.8■□□□□ 0.28
RACK1-229ENST00000513027 STK26Q9P289 416 aa16.8■□□□□ 0.28
RACK1-229ENST00000513027 TBX22Q9Y458 520 aa16.8■□□□□ 0.28
RACK1-229ENST00000513027 ZNF142P52746 1687 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms