RNA–Protein interactions for RNA: ENST00000512768.1

NME1-210, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 1 (best)

Gene NME1, Length 1,056 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-210ENST00000512768 NEXMIFQ5QGS0 1516 aa25.75■■□□□ 1.71
NME1-210ENST00000512768 THEMISQ8N1K5 641 aaPredicted RBP25.74■■□□□ 1.71
NME1-210ENST00000512768 RIMS2Q9UQ26 1411 aa25.73■■□□□ 1.71
NME1-210ENST00000512768 TMEM2Q9UHN6 1383 aa25.71■■□□□ 1.71
NME1-210ENST00000512768 STAC3Q96MF2 364 aa25.71■■□□□ 1.71
NME1-210ENST00000512768 MYOM2P54296 1465 aa25.71■■□□□ 1.71
NME1-210ENST00000512768 NUTM2DQ5VT03 806 aaPredicted RBP25.7■■□□□ 1.7
NME1-210ENST00000512768 ZFYVE9O95405 1425 aa25.69■■□□□ 1.7
NME1-210ENST00000512768 SLIT1O75093 1534 aa25.68■■□□□ 1.7
NME1-210ENST00000512768 ADGRF5Q8IZF2 1346 aa25.67■■□□□ 1.7
NME1-210ENST00000512768 ARHGAP23Q9P227 1491 aa25.67■■□□□ 1.7
NME1-210ENST00000512768 VGFO15240 615 aaPredicted RBP25.67■■□□□ 1.7
NME1-210ENST00000512768 NBPF8Q3BBV2 869 aa25.67■■□□□ 1.7
NME1-210ENST00000512768 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.67■■□□□ 1.7
NME1-210ENST00000512768 PRAG1Q86YV5 1406 aa25.66■■□□□ 1.7
NME1-210ENST00000512768 HDGFP51858 240 aaKnown RBP25.66■■□□□ 1.7
NME1-210ENST00000512768 NRXN1Q9ULB1 1477 aa25.64■■□□□ 1.69
NME1-210ENST00000512768 EID1Q9Y6B2 187 aa25.63■■□□□ 1.69
NME1-210ENST00000512768 TXNDC2Q86VQ3 553 aa25.62■■□□□ 1.69
NME1-210ENST00000512768 LTKP29376 864 aa25.61■■□□□ 1.69
NME1-210ENST00000512768 LMTK3Q96Q04 1460 aa25.6■■□□□ 1.69
NME1-210ENST00000512768 PIK3C2GO75747 1445 aa25.59■■□□□ 1.69
NME1-210ENST00000512768 SENP3Q9H4L4 574 aaPredicted RBP25.58■■□□□ 1.69
NME1-210ENST00000512768 SCAF11Q99590 1463 aaKnown RBP25.58■■□□□ 1.69
NME1-210ENST00000512768 ANKLE2Q86XL3 938 aa25.57■■□□□ 1.68
NME1-210ENST00000512768 TRPM1Q7Z4N2 1603 aa25.56■■□□□ 1.68
NME1-210ENST00000512768 RALGAPBQ86X10 1494 aa25.55■■□□□ 1.68
NME1-210ENST00000512768 HSPA2P54652 639 aa25.55■■□□□ 1.68
NME1-210ENST00000512768 PLEKHG1Q9ULL1 1385 aa25.54■■□□□ 1.68
NME1-210ENST00000512768 KIAA1210Q9ULL0 1709 aa25.54■■□□□ 1.68
NME1-210ENST00000512768 CFAP70Q5T0N1 1121 aa25.53■■□□□ 1.68
NME1-210ENST00000512768 BCANQ96GW7 911 aa25.53■■□□□ 1.68
NME1-210ENST00000512768 C14orf93Q9H972 538 aaKnown RBP25.52■■□□□ 1.68
NME1-210ENST00000512768 POLR1AO95602 1720 aaPredicted RBP25.51■■□□□ 1.68
NME1-210ENST00000512768 SETBP1Q9Y6X0 1596 aa25.51■■□□□ 1.67
NME1-210ENST00000512768 ROCK2O75116 1388 aaKnown RBP25.5■■□□□ 1.67
NME1-210ENST00000512768 LAMC1P11047 1609 aa25.5■■□□□ 1.67
NME1-210ENST00000512768 IQGAP1P46940 1657 aa25.5■■□□□ 1.67
NME1-210ENST00000512768 NBPF1Q3BBV0 1214 aa25.5■■□□□ 1.67
NME1-210ENST00000512768 NRXN3Q9Y4C0 1643 aa25.5■■□□□ 1.67
NME1-210ENST00000512768 NCKAP5LQ9HCH0 1330 aa25.49■■□□□ 1.67
NME1-210ENST00000512768 ALKQ9UM73 1620 aa25.48■■□□□ 1.67
NME1-210ENST00000512768 NPHP4O75161 1426 aaPredicted RBP25.45■■□□□ 1.66
NME1-210ENST00000512768 ADAMTS13Q76LX8 1427 aa25.45■■□□□ 1.66
NME1-210ENST00000512768 GPRASP1Q5JY77 1395 aa25.44■■□□□ 1.66
NME1-210ENST00000512768 CARD11Q9BXL7 1154 aa25.44■■□□□ 1.66
NME1-210ENST00000512768 MED14O60244 1454 aa25.44■■□□□ 1.66
NME1-210ENST00000512768 SETD1AO15047 1707 aaKnown RBP25.43■■□□□ 1.66
NME1-210ENST00000512768 TMEM132EQ6IEE7 984 aa25.42■■□□□ 1.66
NME1-210ENST00000512768 AEBP2Q6ZN18 517 aaPredicted RBP25.42■■□□□ 1.66
NME1-210ENST00000512768 SLC26A8Q96RN1 970 aa25.42■■□□□ 1.66
NME1-210ENST00000512768 ADGRB1O14514 1584 aa25.41■■□□□ 1.66
NME1-210ENST00000512768 ASXL1Q8IXJ9 1541 aa25.41■■□□□ 1.66
NME1-210ENST00000512768 DIP2AQ14689 1571 aa25.4■■□□□ 1.66
NME1-210ENST00000512768 STRCQ7RTU9 1775 aa25.39■■□□□ 1.66
NME1-210ENST00000512768 TBX22Q9Y458 520 aa25.39■■□□□ 1.66
NME1-210ENST00000512768 METP08581 1390 aa25.37■■□□□ 1.65
NME1-210ENST00000512768 USP47Q96K76 1375 aa25.34■■□□□ 1.65
NME1-210ENST00000512768 EIF4G2P78344 907 aaKnown RBP eCLIP25.33■■□□□ 1.65
NME1-210ENST00000512768 YTHDC2Q9H6S0 1430 aaKnown RBP25.33■■□□□ 1.65
NME1-210ENST00000512768 STK26Q9P289 416 aa25.33■■□□□ 1.65
NME1-210ENST00000512768 LRPPRCP42704 1394 aaKnown RBP25.31■■□□□ 1.64
NME1-210ENST00000512768 HSPA5P11021 654 aaKnown RBP25.31■■□□□ 1.64
NME1-210ENST00000512768 TRAK1Q9UPV9 953 aa25.31■■□□□ 1.64
NME1-210ENST00000512768 PIK3R4Q99570 1358 aa25.29■■□□□ 1.64
NME1-210ENST00000512768 PTPRUQ92729 1446 aa25.28■■□□□ 1.64
NME1-210ENST00000512768 EIF3AQ14152 1382 aaKnown RBP25.27■■□□□ 1.64
NME1-210ENST00000512768 HIRIP3Q9BW71 556 aaPredicted RBP25.26■■□□□ 1.63
NME1-210ENST00000512768 ABCC11Q96J66 1382 aa25.26■■□□□ 1.63
NME1-210ENST00000512768 KNDC1Q76NI1 1749 aa25.25■■□□□ 1.63
NME1-210ENST00000512768 ARHGEF28Q8N1W1 1705 aaKnown RBP25.25■■□□□ 1.63
NME1-210ENST00000512768 CHD2O14647 1828 aaKnown RBP25.24■■□□□ 1.63
NME1-210ENST00000512768 ST20-MTHFSA0A0A6YYL1 179 aa25.24■■□□□ 1.63
NME1-210ENST00000512768 AMOTL2Q9Y2J4 779 aa25.24■■□□□ 1.63
NME1-210ENST00000512768 DLC1Q96QB1 1528 aa25.23■■□□□ 1.63
NME1-210ENST00000512768 DMRT2Q9Y5R5 561 aa25.23■■□□□ 1.63
NME1-210ENST00000512768 TECPR2O15040 1411 aa25.22■■□□□ 1.63
NME1-210ENST00000512768 XRN1Q8IZH2 1706 aaKnown RBP25.22■■□□□ 1.63
NME1-210ENST00000512768 CENPJQ9HC77 1338 aaPredicted RBP25.2■■□□□ 1.62
NME1-210ENST00000512768 CPS1P31327 1500 aa25.2■■□□□ 1.62
NME1-210ENST00000512768 KCNA6P17658 529 aa25.19■■□□□ 1.62
NME1-210ENST00000512768 PRAM1Q96QH2 718 aa25.19■■□□□ 1.62
NME1-210ENST00000512768 POGKQ9P215 609 aa25.19■■□□□ 1.62
NME1-210ENST00000512768 SIRT1Q96EB6 747 aa25.18■■□□□ 1.62
NME1-210ENST00000512768 NWD1Q149M9 1564 aa25.18■■□□□ 1.62
NME1-210ENST00000512768 ROBO2Q9HCK4 1378 aa25.18■■□□□ 1.62
NME1-210ENST00000512768 FAM135BQ49AJ0 1406 aa25.17■■□□□ 1.62
NME1-210ENST00000512768 QRICH2Q9H0J4 1663 aa25.17■■□□□ 1.62
NME1-210ENST00000512768 PTCH1Q13635 1447 aa25.16■■□□□ 1.62
NME1-210ENST00000512768 WAPLQ7Z5K2 1190 aa25.16■■□□□ 1.62
NME1-210ENST00000512768 SAFB2Q14151 953 aaKnown RBP eCLIP25.15■■□□□ 1.62
NME1-210ENST00000512768 PLEKHH1Q9ULM0 1364 aa25.15■■□□□ 1.62
NME1-210ENST00000512768 ZNF316A6NFI3 1004 aaPredicted RBP25.14■■□□□ 1.62
NME1-210ENST00000512768 TESK2Q96S53 571 aa25.14■■□□□ 1.62
NME1-210ENST00000512768 STRCP1A6NGW2 1772 aa25.11■■□□□ 1.61
NME1-210ENST00000512768 SBNO2Q9Y2G9 1366 aa25.1■■□□□ 1.61
NME1-210ENST00000512768 NKTRP30414 1462 aaKnown RBP25.09■■□□□ 1.61
NME1-210ENST00000512768 MINK1Q8N4C8 1332 aaPredicted RBP25.09■■□□□ 1.61
NME1-210ENST00000512768 ZNF335Q9H4Z2 1342 aaPredicted RBP25.09■■□□□ 1.61
NME1-210ENST00000512768 TMF1P82094 1093 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms