RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 EFCAB6Q5THR3 1501 aa14.85□□□□□ -0.03
NUP54-211ENST00000512151 NUTM2BA6NNL0 878 aaPredicted RBP14.85□□□□□ -0.03
NUP54-211ENST00000512151 NUTM2EB1AL46 878 aaPredicted RBP14.85□□□□□ -0.03
NUP54-211ENST00000512151 NUTM2AQ8IVF1 878 aaPredicted RBP14.85□□□□□ -0.03
NUP54-211ENST00000512151 DIP2AQ14689 1571 aa14.84□□□□□ -0.03
NUP54-211ENST00000512151 MAST1Q9Y2H9 1570 aa14.84□□□□□ -0.03
NUP54-211ENST00000512151 SETBP1Q9Y6X0 1596 aa14.84□□□□□ -0.03
NUP54-211ENST00000512151 IDI1Q13907 227 aa14.84□□□□□ -0.03
NUP54-211ENST00000512151 STAG3Q9UJ98 1225 aa14.83□□□□□ -0.04
NUP54-211ENST00000512151 CHD2O14647 1828 aaKnown RBP14.8□□□□□ -0.04
NUP54-211ENST00000512151 NUTM2DQ5VT03 806 aaPredicted RBP14.79□□□□□ -0.04
NUP54-211ENST00000512151 QTRT2Q9H974 415 aaKnown RBP14.78□□□□□ -0.04
NUP54-211ENST00000512151 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.78□□□□□ -0.04
NUP54-211ENST00000512151 RBM6P78332 1123 aaKnown RBP14.77□□□□□ -0.04
NUP54-211ENST00000512151 BCANQ96GW7 911 aa14.77□□□□□ -0.04
NUP54-211ENST00000512151 DUOX2Q9NRD8 1548 aa14.77□□□□□ -0.05
NUP54-211ENST00000512151 BRINP3Q76B58 766 aa14.76□□□□□ -0.05
NUP54-211ENST00000512151 ZRANB1Q9UGI0 708 aa14.76□□□□□ -0.05
NUP54-211ENST00000512151 ADGRB3O60242 1522 aa14.76□□□□□ -0.05
NUP54-211ENST00000512151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.75□□□□□ -0.05
NUP54-211ENST00000512151 C8orf37Q96NL8 207 aa14.74□□□□□ -0.05
NUP54-211ENST00000512151 NCOA3Q9Y6Q9 1424 aa14.74□□□□□ -0.05
NUP54-211ENST00000512151 ZFYVE9O95405 1425 aa14.73□□□□□ -0.05
NUP54-211ENST00000512151 C14orf37Q86TY3 774 aa14.73□□□□□ -0.05
NUP54-211ENST00000512151 ATAD2Q6PL18 1390 aa14.73□□□□□ -0.05
NUP54-211ENST00000512151 PLEKHG1Q9ULL1 1385 aa14.73□□□□□ -0.05
NUP54-211ENST00000512151 NOS1P29475 1434 aa14.73□□□□□ -0.05
NUP54-211ENST00000512151 CADPS2Q86UW7 1296 aa14.73□□□□□ -0.05
NUP54-211ENST00000512151 C19orf44Q9H6X5 657 aa14.73□□□□□ -0.05
NUP54-211ENST00000512151 SETD5Q9C0A6 1442 aa14.72□□□□□ -0.05
NUP54-211ENST00000512151 ATF3P18847 181 aa14.71□□□□□ -0.06
NUP54-211ENST00000512151 KIF15Q9NS87 1388 aa14.7□□□□□ -0.06
NUP54-211ENST00000512151 MYO5BQ9ULV0 1848 aa14.7□□□□□ -0.06
NUP54-211ENST00000512151 LMTK2Q8IWU2 1503 aa14.7□□□□□ -0.06
NUP54-211ENST00000512151 ASXL1Q8IXJ9 1541 aa14.7□□□□□ -0.06
NUP54-211ENST00000512151 ERBINQ96RT1 1412 aa14.69□□□□□ -0.06
NUP54-211ENST00000512151 DDX17Q92841 729 aaKnown RBP14.69□□□□□ -0.06
NUP54-211ENST00000512151 TBX22Q9Y458 520 aa14.69□□□□□ -0.06
NUP54-211ENST00000512151 PNPLA6Q8IY17 1366 aa14.69□□□□□ -0.06
NUP54-211ENST00000512151 ADAMTS13Q76LX8 1427 aa14.69□□□□□ -0.06
NUP54-211ENST00000512151 RIMS2Q9UQ26 1411 aa14.69□□□□□ -0.06
NUP54-211ENST00000512151 RRP7BPQ9NSQ0 103 aa14.68□□□□□ -0.06
NUP54-211ENST00000512151 NHSL1Q5SYE7 1610 aa14.67□□□□□ -0.06
NUP54-211ENST00000512151 PTPRUQ92729 1446 aa14.65□□□□□ -0.06
NUP54-211ENST00000512151 KANK1Q14678 1352 aa14.65□□□□□ -0.06
NUP54-211ENST00000512151 ADAMTS2O95450 1211 aa14.65□□□□□ -0.06
NUP54-211ENST00000512151 NGLY1Q96IV0 654 aa14.65□□□□□ -0.06
NUP54-211ENST00000512151 MST1RQ04912 1400 aa14.64□□□□□ -0.07
NUP54-211ENST00000512151 PPP1R15AO75807 674 aaPredicted RBP14.64□□□□□ -0.07
NUP54-211ENST00000512151 LRRC59Q96AG4 307 aaKnown RBP14.64□□□□□ -0.07
NUP54-211ENST00000512151 SLC52A1Q9NWF4 448 aa14.64□□□□□ -0.07
NUP54-211ENST00000512151 MYOM3Q5VTT5 1437 aa14.64□□□□□ -0.07
NUP54-211ENST00000512151 GCC2Q8IWJ2 1684 aa14.63□□□□□ -0.07
NUP54-211ENST00000512151 ABCC5O15440 1437 aa14.63□□□□□ -0.07
NUP54-211ENST00000512151 TMEM131LA2VDJ0 1609 aa14.62□□□□□ -0.07
NUP54-211ENST00000512151 CROCC2H7BZ55 1655 aa14.61□□□□□ -0.07
NUP54-211ENST00000512151 ATRNO75882 1429 aa14.61□□□□□ -0.07
NUP54-211ENST00000512151 DCCP43146 1447 aa14.61□□□□□ -0.07
NUP54-211ENST00000512151 USP21Q9UK80 565 aa14.6□□□□□ -0.07
NUP54-211ENST00000512151 AMOTL2Q9Y2J4 779 aa14.6□□□□□ -0.07
NUP54-211ENST00000512151 TRPC5Q9UL62 973 aaPredicted RBP14.6□□□□□ -0.07
NUP54-211ENST00000512151 LRP5O75197 1615 aa14.59□□□□□ -0.07
NUP54-211ENST00000512151 PIK3R4Q99570 1358 aa14.59□□□□□ -0.07
NUP54-211ENST00000512151 EP400Q96L91 3159 aa14.59□□□□□ -0.07
NUP54-211ENST00000512151 KANK4Q5T7N3 995 aaPredicted RBP14.58□□□□□ -0.08
NUP54-211ENST00000512151 CCDC125Q86Z20 511 aa14.58□□□□□ -0.08
NUP54-211ENST00000512151 TRPM2O94759 1503 aa14.57□□□□□ -0.08
NUP54-211ENST00000512151 HDGFP51858 240 aaKnown RBP14.57□□□□□ -0.08
NUP54-211ENST00000512151 FNBP4Q8N3X1 1017 aaPredicted RBP14.57□□□□□ -0.08
NUP54-211ENST00000512151 POTEHQ6S545 545 aa14.56□□□□□ -0.08
NUP54-211ENST00000512151 DEFB132Q7Z7B7 95 aa14.56□□□□□ -0.08
NUP54-211ENST00000512151 XRN1Q8IZH2 1706 aaKnown RBP14.55□□□□□ -0.08
NUP54-211ENST00000512151 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.55□□□□□ -0.08
NUP54-211ENST00000512151 DAPK1P53355 1430 aa14.54□□□□□ -0.08
NUP54-211ENST00000512151 UNC13BO14795 1591 aa14.53□□□□□ -0.08
NUP54-211ENST00000512151 RPRD2Q5VT52 1461 aaKnown RBP14.53□□□□□ -0.08
NUP54-211ENST00000512151 CHGAP10645 457 aaKnown RBP14.53□□□□□ -0.08
NUP54-211ENST00000512151 MAPK8IP2Q13387 824 aaPredicted RBP14.53□□□□□ -0.08
NUP54-211ENST00000512151 CHIC2Q9UKJ5 165 aa14.53□□□□□ -0.08
NUP54-211ENST00000512151 BCL9LQ86UU0 1499 aa14.52□□□□□ -0.08
NUP54-211ENST00000512151 PTCH1Q13635 1447 aa14.52□□□□□ -0.09
NUP54-211ENST00000512151 NRXN3Q9Y4C0 1643 aa14.51□□□□□ -0.09
NUP54-211ENST00000512151 BLMP54132 1417 aaPredicted RBP14.51□□□□□ -0.09
NUP54-211ENST00000512151 LAMC1P11047 1609 aa14.51□□□□□ -0.09
NUP54-211ENST00000512151 ADGRL3Q9HAR2 1447 aa14.5□□□□□ -0.09
NUP54-211ENST00000512151 C1orf167Q5SNV9 1468 aa14.5□□□□□ -0.09
NUP54-211ENST00000512151 SOS2Q07890 1332 aaPredicted RBP14.5□□□□□ -0.09
NUP54-211ENST00000512151 PTPN23Q9H3S7 1636 aa14.49□□□□□ -0.09
NUP54-211ENST00000512151 NALCNQ8IZF0 1738 aa14.49□□□□□ -0.09
NUP54-211ENST00000512151 ANKRD30AQ9BXX3 1397 aa14.49□□□□□ -0.09
NUP54-211ENST00000512151 METP08581 1390 aa14.48□□□□□ -0.09
NUP54-211ENST00000512151 PSDA5PKW4 1024 aaPredicted RBP14.47□□□□□ -0.09
NUP54-211ENST00000512151 GJD4Q96KN9 370 aaPredicted RBP14.47□□□□□ -0.09
NUP54-211ENST00000512151 ORAI2Q96SN7 254 aa14.47□□□□□ -0.09
NUP54-211ENST00000512151 COL22A1Q8NFW1 1626 aaPredicted RBP14.47□□□□□ -0.09
NUP54-211ENST00000512151 MYOM2P54296 1465 aa14.47□□□□□ -0.09
NUP54-211ENST00000512151 HRCP23327 699 aa14.47□□□□□ -0.09
NUP54-211ENST00000512151 BRWD3Q6RI45 1802 aa14.46□□□□□ -0.09
NUP54-211ENST00000512151 GLI3P10071 1580 aa14.46□□□□□ -0.1
NUP54-211ENST00000512151 RALGAPBQ86X10 1494 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms