RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 CASC1Q6TDU7 716 aa13.6□□□□□ -0.23
CPNE4-209ENST00000512055 CRBNQ96SW2 442 aa13.59□□□□□ -0.23
CPNE4-209ENST00000512055 CGNL1Q0VF96 1302 aa13.59□□□□□ -0.23
CPNE4-209ENST00000512055 ITPRIPQ8IWB1 547 aa13.59□□□□□ -0.23
CPNE4-209ENST00000512055 CDCA7LQ96GN5 454 aa13.59□□□□□ -0.23
CPNE4-209ENST00000512055 ADAMTS8Q9UP79 889 aa13.59□□□□□ -0.23
CPNE4-209ENST00000512055 SMC4Q9NTJ3 1288 aa13.58□□□□□ -0.24
CPNE4-209ENST00000512055 PAK3O75914 559 aaPredicted RBP13.57□□□□□ -0.24
CPNE4-209ENST00000512055 BRD4O60885 1362 aaPredicted RBP13.57□□□□□ -0.24
CPNE4-209ENST00000512055 UGGT2Q9NYU1 1516 aa13.57□□□□□ -0.24
CPNE4-209ENST00000512055 CTTNBP2Q8WZ74 1663 aa13.57□□□□□ -0.24
CPNE4-209ENST00000512055 USP35Q9P2H5 1018 aa13.57□□□□□ -0.24
CPNE4-209ENST00000512055 CCDC141Q6ZP82 1450 aa13.56□□□□□ -0.24
CPNE4-209ENST00000512055 PLEKHH2Q8IVE3 1493 aa13.56□□□□□ -0.24
CPNE4-209ENST00000512055 PNISRQ8TF01 805 aaKnown RBP13.56□□□□□ -0.24
CPNE4-209ENST00000512055 STAC3Q96MF2 364 aa13.56□□□□□ -0.24
CPNE4-209ENST00000512055 RAPGEF3O95398 923 aa13.55□□□□□ -0.24
CPNE4-209ENST00000512055 NUP153P49790 1475 aaKnown RBP13.55□□□□□ -0.24
CPNE4-209ENST00000512055 GPATCH8Q9UKJ3 1502 aaKnown RBP13.55□□□□□ -0.24
CPNE4-209ENST00000512055 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
CPNE4-209ENST00000512055 IPO8O15397 1037 aaKnown RBP13.54□□□□□ -0.24
CPNE4-209ENST00000512055 HSCBQ8IWL3 235 aa13.54□□□□□ -0.24
CPNE4-209ENST00000512055 E9PSI1 815 aa13.54□□□□□ -0.24
CPNE4-209ENST00000512055 APBB1O00213 710 aa13.54□□□□□ -0.24
CPNE4-209ENST00000512055 HAP1P54257 671 aaPredicted RBP13.54□□□□□ -0.24
CPNE4-209ENST00000512055 KIF14Q15058 1648 aa13.53□□□□□ -0.24
CPNE4-209ENST00000512055 RTF1Q92541 710 aaKnown RBP13.53□□□□□ -0.24
CPNE4-209ENST00000512055 RPRD2Q5VT52 1461 aaKnown RBP13.53□□□□□ -0.24
CPNE4-209ENST00000512055 GOLGA6L3A6NEY3 463 aa13.53□□□□□ -0.24
CPNE4-209ENST00000512055 CHMP4BQ9H444 224 aaKnown RBP13.53□□□□□ -0.24
CPNE4-209ENST00000512055 PPP2R1AP30153 589 aa13.53□□□□□ -0.24
CPNE4-209ENST00000512055 RWDD1Q9H446 243 aaPredicted RBP13.53□□□□□ -0.24
CPNE4-209ENST00000512055 PDE4CQ08493 712 aa13.52□□□□□ -0.24
CPNE4-209ENST00000512055 COG6Q9Y2V7 657 aa13.52□□□□□ -0.24
CPNE4-209ENST00000512055 KIF21AQ7Z4S6 1674 aa13.52□□□□□ -0.25
CPNE4-209ENST00000512055 ELL2O00472 640 aaPredicted RBP13.52□□□□□ -0.25
CPNE4-209ENST00000512055 GGNBP2Q9H3C7 697 aa13.51□□□□□ -0.25
CPNE4-209ENST00000512055 EID1Q9Y6B2 187 aa13.51□□□□□ -0.25
CPNE4-209ENST00000512055 CLSTN1O94985 981 aa13.51□□□□□ -0.25
CPNE4-209ENST00000512055 FGD1P98174 961 aa13.51□□□□□ -0.25
CPNE4-209ENST00000512055 NGDNQ8NEJ9 315 aaKnown RBP13.51□□□□□ -0.25
CPNE4-209ENST00000512055 IPO9Q96P70 1041 aaKnown RBP13.51□□□□□ -0.25
CPNE4-209ENST00000512055 SLC12A5Q9H2X9 1139 aa13.5□□□□□ -0.25
CPNE4-209ENST00000512055 CFAP43Q8NDM7 1665 aa13.5□□□□□ -0.25
CPNE4-209ENST00000512055 RAPGEF6Q8TEU7 1601 aa13.5□□□□□ -0.25
CPNE4-209ENST00000512055 MEX3CQ5U5Q3 659 aaKnown RBP13.5□□□□□ -0.25
CPNE4-209ENST00000512055 ATP10BO94823 1461 aa13.5□□□□□ -0.25
CPNE4-209ENST00000512055 PDE4AP27815 886 aa13.5□□□□□ -0.25
CPNE4-209ENST00000512055 NAP1L2Q9ULW6 460 aaPredicted RBP13.5□□□□□ -0.25
CPNE4-209ENST00000512055 CALD1Q05682 793 aaKnown RBP13.49□□□□□ -0.25
CPNE4-209ENST00000512055 PRM3Q9NNZ6 103 aa13.49□□□□□ -0.25
CPNE4-209ENST00000512055 ERBINQ96RT1 1412 aa13.49□□□□□ -0.25
CPNE4-209ENST00000512055 ADAMTS12P58397 1594 aa13.49□□□□□ -0.25
CPNE4-209ENST00000512055 FAM13BQ9NYF5 915 aa13.49□□□□□ -0.25
CPNE4-209ENST00000512055 PMFBP1Q8TBY8 1022 aa13.48□□□□□ -0.25
CPNE4-209ENST00000512055 MTHFSP49914 203 aa13.48□□□□□ -0.25
CPNE4-209ENST00000512055 STK11IPQ8N1F8 1099 aa13.47□□□□□ -0.25
CPNE4-209ENST00000512055 LTV1Q96GA3 475 aaPredicted RBP13.47□□□□□ -0.25
CPNE4-209ENST00000512055 CENPQQ7L2Z9 268 aaPredicted RBP13.46□□□□□ -0.25
CPNE4-209ENST00000512055 RRP12Q5JTH9 1297 aaKnown RBP13.46□□□□□ -0.25
CPNE4-209ENST00000512055 COG3Q96JB2 828 aa13.46□□□□□ -0.25
CPNE4-209ENST00000512055 SLKQ9H2G2 1235 aaPredicted RBP13.46□□□□□ -0.25
CPNE4-209ENST00000512055 RUNDC1Q96C34 613 aa13.46□□□□□ -0.26
CPNE4-209ENST00000512055 DIAPH1O60610 1272 aaKnown RBP13.45□□□□□ -0.26
CPNE4-209ENST00000512055 WDR62O43379 1518 aa13.45□□□□□ -0.26
CPNE4-209ENST00000512055 AMPHP49418 695 aa13.45□□□□□ -0.26
CPNE4-209ENST00000512055 OS9Q13438 667 aaPredicted RBP13.44□□□□□ -0.26
CPNE4-209ENST00000512055 ANO8Q9HCE9 1232 aaPredicted RBP13.44□□□□□ -0.26
CPNE4-209ENST00000512055 KIAA0556O60303 1618 aa13.44□□□□□ -0.26
CPNE4-209ENST00000512055 GBP4Q96PP9 640 aa13.44□□□□□ -0.26
CPNE4-209ENST00000512055 RIPK4P57078 832 aa13.44□□□□□ -0.26
CPNE4-209ENST00000512055 SLC4A3P48751 1232 aa13.43□□□□□ -0.26
CPNE4-209ENST00000512055 PRAM1Q96QH2 718 aa13.43□□□□□ -0.26
CPNE4-209ENST00000512055 MFAP1P55081 439 aaKnown RBP13.43□□□□□ -0.26
CPNE4-209ENST00000512055 TCP11L2Q8N4U5 519 aa13.43□□□□□ -0.26
CPNE4-209ENST00000512055 TCOF1Q13428 1488 aaKnown RBP13.42□□□□□ -0.26
CPNE4-209ENST00000512055 ZKSCAN2Q63HK3 967 aa13.42□□□□□ -0.26
CPNE4-209ENST00000512055 HMOX1P09601 288 aa13.42□□□□□ -0.26
CPNE4-209ENST00000512055 KCNJ4P48050 445 aa13.42□□□□□ -0.26
CPNE4-209ENST00000512055 SLC4A10Q6U841 1118 aa13.42□□□□□ -0.26
CPNE4-209ENST00000512055 PANK1Q8TE04 598 aa13.42□□□□□ -0.26
CPNE4-209ENST00000512055 ABCA5Q8WWZ7 1642 aa13.41□□□□□ -0.26
CPNE4-209ENST00000512055 FBXO3Q9UK99 471 aa13.41□□□□□ -0.26
CPNE4-209ENST00000512055 DISP1Q96F81 1524 aa13.4□□□□□ -0.26
CPNE4-209ENST00000512055 LMOD3Q0VAK6 560 aa13.4□□□□□ -0.26
CPNE4-209ENST00000512055 FANCIQ9NVI1 1328 aa13.4□□□□□ -0.26
CPNE4-209ENST00000512055 NOM1Q5C9Z4 860 aaKnown RBP13.4□□□□□ -0.26
CPNE4-209ENST00000512055 EIF4G3O43432 1585 aaKnown RBP13.39□□□□□ -0.27
CPNE4-209ENST00000512055 ADGRL1O94910 1474 aa13.39□□□□□ -0.27
CPNE4-209ENST00000512055 FAM161AQ3B820 660 aa13.39□□□□□ -0.27
CPNE4-209ENST00000512055 CCAR2Q8N163 923 aaKnown RBP13.39□□□□□ -0.27
CPNE4-209ENST00000512055 ADGRF5Q8IZF2 1346 aa13.39□□□□□ -0.27
CPNE4-209ENST00000512055 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
CPNE4-209ENST00000512055 HTATSF1O43719 755 aaKnown RBP13.39□□□□□ -0.27
CPNE4-209ENST00000512055 NGEFQ8N5V2 710 aa13.39□□□□□ -0.27
CPNE4-209ENST00000512055 GPS2Q13227 327 aa13.38□□□□□ -0.27
CPNE4-209ENST00000512055 STK31Q9BXU1 1019 aa13.38□□□□□ -0.27
CPNE4-209ENST00000512055 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
CPNE4-209ENST00000512055 TEX35Q5T0J7 233 aa13.38□□□□□ -0.27
CPNE4-209ENST00000512055 CD109Q6YHK3 1445 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms