RNA–Protein interactions for RNA: ENST00000511600.5

RNF4-214, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF4, Length 4,123 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-214ENST00000511600 SKOR2Q2VWA4 1001 aaPredicted RBP8.64□□□□□ -1.03
RNF4-214ENST00000511600 PPP4R3BQ5MIZ7 849 aa8.64□□□□□ -1.03
RNF4-214ENST00000511600 TEX14Q8IWB6 1497 aa8.64□□□□□ -1.03
RNF4-214ENST00000511600 GOLGA6L6A8MZA4 724 aa8.64□□□□□ -1.03
RNF4-214ENST00000511600 HSCBQ8IWL3 235 aa8.64□□□□□ -1.03
RNF4-214ENST00000511600 DHX37Q8IY37 1157 aaKnown RBP8.64□□□□□ -1.03
RNF4-214ENST00000511600 DNAJC2Q99543 621 aaKnown RBP8.64□□□□□ -1.03
RNF4-214ENST00000511600 POGKQ9P215 609 aa8.64□□□□□ -1.03
RNF4-214ENST00000511600 GPATCH8Q9UKJ3 1502 aaKnown RBP8.63□□□□□ -1.03
RNF4-214ENST00000511600 CALRP27797 417 aaKnown RBP8.63□□□□□ -1.03
RNF4-214ENST00000511600 CCDC173Q0VFZ6 552 aa8.63□□□□□ -1.03
RNF4-214ENST00000511600 MAPK8IP2Q13387 824 aaPredicted RBP8.63□□□□□ -1.03
RNF4-214ENST00000511600 RSPH4AQ5TD94 716 aa8.63□□□□□ -1.03
RNF4-214ENST00000511600 ABCC10Q5T3U5 1492 aa8.62□□□□□ -1.03
RNF4-214ENST00000511600 CLGNO14967 610 aa8.62□□□□□ -1.03
RNF4-214ENST00000511600 HSP90B1P14625 803 aaKnown RBP8.62□□□□□ -1.03
RNF4-214ENST00000511600 KDM6BO15054 1643 aa8.62□□□□□ -1.03
RNF4-214ENST00000511600 ZSCAN30Q86W11 494 aa8.62□□□□□ -1.03
RNF4-214ENST00000511600 GRPEL1Q9HAV7 217 aa8.62□□□□□ -1.03
RNF4-214ENST00000511600 RCAN3Q9UKA8 241 aa8.62□□□□□ -1.03
RNF4-214ENST00000511600 HMGN5P82970 282 aaKnown RBP8.61□□□□□ -1.03
RNF4-214ENST00000511600 CC2D1BQ5T0F9 858 aaKnown RBP8.61□□□□□ -1.03
RNF4-214ENST00000511600 MPHOSPH9Q99550 1183 aa8.61□□□□□ -1.03
RNF4-214ENST00000511600 SHROOM2Q13796 1616 aa8.61□□□□□ -1.03
RNF4-214ENST00000511600 VGLL3A8MV65 326 aa8.61□□□□□ -1.03
RNF4-214ENST00000511600 GOLGA6L1Q8N7Z2 621 aa8.61□□□□□ -1.03
RNF4-214ENST00000511600 E9PSI1 815 aa8.61□□□□□ -1.03
RNF4-214ENST00000511600 DYNC1I1O14576 645 aa8.61□□□□□ -1.03
RNF4-214ENST00000511600 CHMP4AQ9BY43 222 aa8.61□□□□□ -1.03
RNF4-214ENST00000511600 ARHGEF5Q12774 1597 aa8.6□□□□□ -1.03
RNF4-214ENST00000511600 ATP10BO94823 1461 aa8.6□□□□□ -1.03
RNF4-214ENST00000511600 PLEKHH2Q8IVE3 1493 aa8.6□□□□□ -1.03
RNF4-214ENST00000511600 TSPY4P0CV99 314 aa8.6□□□□□ -1.03
RNF4-214ENST00000511600 TSPY10P0CW01 314 aa8.6□□□□□ -1.03
RNF4-214ENST00000511600 UTP14CQ5TAP6 766 aaKnown RBP8.6□□□□□ -1.03
RNF4-214ENST00000511600 SPRYD3Q8NCJ5 442 aa8.6□□□□□ -1.03
RNF4-214ENST00000511600 BCCIPQ9P287 314 aaKnown RBP eCLIP8.6□□□□□ -1.03
RNF4-214ENST00000511600 TRAK2O60296 914 aa8.59□□□□□ -1.03
RNF4-214ENST00000511600 HSP90AB1P08238 724 aaKnown RBP8.59□□□□□ -1.03
RNF4-214ENST00000511600 DCAF11Q8TEB1 546 aa8.59□□□□□ -1.03
RNF4-214ENST00000511600 CDC42BPAQ5VT25 1732 aa8.59□□□□□ -1.03
RNF4-214ENST00000511600 TULP1O00294 542 aaPredicted RBP8.59□□□□□ -1.03
RNF4-214ENST00000511600 MLECQ14165 292 aa8.59□□□□□ -1.03
RNF4-214ENST00000511600 AXDND1Q5T1B0 1012 aaPredicted RBP8.59□□□□□ -1.03
RNF4-214ENST00000511600 NCOA1Q15788 1441 aa8.58□□□□□ -1.04
RNF4-214ENST00000511600 EXOC6Q8TAG9 804 aa8.58□□□□□ -1.04
RNF4-214ENST00000511600 SLC4A1APQ9BWU0 796 aaKnown RBP8.58□□□□□ -1.04
RNF4-214ENST00000511600 CHMP5Q9NZZ3 219 aa8.58□□□□□ -1.04
RNF4-214ENST00000511600 ASXL2Q76L83 1435 aa8.58□□□□□ -1.04
RNF4-214ENST00000511600 NASPP49321 788 aaPredicted RBP8.58□□□□□ -1.04
RNF4-214ENST00000511600 TERF1P54274 439 aa8.58□□□□□ -1.04
RNF4-214ENST00000511600 RRP1P56182 461 aaKnown RBP8.58□□□□□ -1.04
RNF4-214ENST00000511600 ILDR1Q86SU0 546 aaPredicted RBP8.58□□□□□ -1.04
RNF4-214ENST00000511600 RPRD2Q5VT52 1461 aaKnown RBP8.58□□□□□ -1.04
RNF4-214ENST00000511600 ZFP91Q96JP5 570 aaPredicted RBP8.57□□□□□ -1.04
RNF4-214ENST00000511600 CCDC94Q9BW85 323 aaPredicted RBP8.57□□□□□ -1.04
RNF4-214ENST00000511600 CENPQQ7L2Z9 268 aaPredicted RBP8.57□□□□□ -1.04
RNF4-214ENST00000511600 WWC1Q8IX03 1113 aa8.57□□□□□ -1.04
RNF4-214ENST00000511600 STAC3Q96MF2 364 aa8.57□□□□□ -1.04
RNF4-214ENST00000511600 KIF3AQ9Y496 699 aa8.57□□□□□ -1.04
RNF4-214ENST00000511600 PREX2Q70Z35 1606 aa8.57□□□□□ -1.04
RNF4-214ENST00000511600 ABCC2Q92887 1545 aa8.57□□□□□ -1.04
RNF4-214ENST00000511600 KCNJ4P48050 445 aa8.57□□□□□ -1.04
RNF4-214ENST00000511600 CBX1P83916 185 aa8.57□□□□□ -1.04
RNF4-214ENST00000511600 C9orf84Q5VXU9 1444 aa8.57□□□□□ -1.04
RNF4-214ENST00000511600 XRCC6P12956 609 aaKnown RBP eCLIP8.56□□□□□ -1.04
RNF4-214ENST00000511600 CALCOCO1Q9P1Z2 691 aa8.56□□□□□ -1.04
RNF4-214ENST00000511600 ERCC6L2Q5T890 1561 aa8.56□□□□□ -1.04
RNF4-214ENST00000511600 ANKRD50Q9ULJ7 1429 aa8.56□□□□□ -1.04
RNF4-214ENST00000511600 ZBTB7CA1YPR0 619 aa8.56□□□□□ -1.04
RNF4-214ENST00000511600 CCDC141Q6ZP82 1450 aa8.56□□□□□ -1.04
RNF4-214ENST00000511600 SASS6Q6UVJ0 657 aa8.56□□□□□ -1.04
RNF4-214ENST00000511600 TEX2Q8IWB9 1127 aa8.56□□□□□ -1.04
RNF4-214ENST00000511600 ANKRD30BQ9BXX2 1392 aa8.56□□□□□ -1.04
RNF4-214ENST00000511600 CD109Q6YHK3 1445 aa8.56□□□□□ -1.04
RNF4-214ENST00000511600 KIAA1107Q9UPP5 1409 aa8.56□□□□□ -1.04
RNF4-214ENST00000511600 TSPOAP1O95153 1857 aa8.55□□□□□ -1.04
RNF4-214ENST00000511600 KDM5DQ9BY66 1539 aa8.55□□□□□ -1.04
RNF4-214ENST00000511600 DMTNQ08495 405 aa8.55□□□□□ -1.04
RNF4-214ENST00000511600 OFD1O75665 1012 aa8.55□□□□□ -1.04
RNF4-214ENST00000511600 TIGD1Q96MW7 591 aa8.55□□□□□ -1.04
RNF4-214ENST00000511600 UHRF1BP1LA0JNW5 1464 aa8.54□□□□□ -1.04
RNF4-214ENST00000511600 GTF2E1P29083 439 aaPredicted RBP8.54□□□□□ -1.04
RNF4-214ENST00000511600 DIAPH3Q9NSV4 1193 aa8.54□□□□□ -1.04
RNF4-214ENST00000511600 CCDC39Q9UFE4 941 aa8.54□□□□□ -1.04
RNF4-214ENST00000511600 MAST1Q9Y2H9 1570 aa8.54□□□□□ -1.04
RNF4-214ENST00000511600 ZNF644Q9H582 1327 aaPredicted RBP8.54□□□□□ -1.04
RNF4-214ENST00000511600 KTN1Q86UP2 1357 aaKnown RBP8.54□□□□□ -1.04
RNF4-214ENST00000511600 KDM4FA0A1W2PPD8 638 aa8.54□□□□□ -1.04
RNF4-214ENST00000511600 FAM193AP78312 1265 aa8.53□□□□□ -1.04
RNF4-214ENST00000511600 NOM1Q5C9Z4 860 aaKnown RBP8.53□□□□□ -1.04
RNF4-214ENST00000511600 MYO5CQ9NQX4 1742 aa8.53□□□□□ -1.04
RNF4-214ENST00000511600 SENP3-EIF4A1A0A087X0R7 540 aa8.53□□□□□ -1.04
RNF4-214ENST00000511600 MCM4P33991 863 aa8.53□□□□□ -1.04
RNF4-214ENST00000511600 POGZQ7Z3K3 1410 aa8.53□□□□□ -1.04
RNF4-214ENST00000511600 PDE3BQ13370 1112 aa8.53□□□□□ -1.04
RNF4-214ENST00000511600 NBPF1Q3BBV0 1214 aa8.53□□□□□ -1.04
RNF4-214ENST00000511600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.53□□□□□ -1.049e-7■■□□□ 12.4
RNF4-214ENST00000511600 PZPP20742 1482 aa8.53□□□□□ -1.04
RNF4-214ENST00000511600 ARHGAP5Q13017 1502 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms