RNA–Protein interactions for RNA: ENST00000511600.5

RNF4-214, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF4, Length 4,123 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-214ENST00000511600 NISCHQ9Y2I1 1504 aa13.02□□□□□ -0.32
RNF4-214ENST00000511600 PELP1Q8IZL8 1130 aaKnown RBP12.08□□□□□ -0.48
RNF4-214ENST00000511600 MYT1Q01538 1121 aa11.99□□□□□ -0.49
RNF4-214ENST00000511600 CCDC180Q9P1Z9 1646 aa11.32□□□□□ -0.6
RNF4-214ENST00000511600 ABCC9O60706 1549 aa11.27□□□□□ -0.6
RNF4-214ENST00000511600 TTBK1Q5TCY1 1321 aaPredicted RBP11.26□□□□□ -0.61
RNF4-214ENST00000511600 AEBP2Q6ZN18 517 aaPredicted RBP11.25□□□□□ -0.61
RNF4-214ENST00000511600 CHIC1Q5VXU3 224 aa11.25□□□□□ -0.61
RNF4-214ENST00000511600 DCAF8L2P0C7V8 631 aa11.16□□□□□ -0.62
RNF4-214ENST00000511600 HRCP23327 699 aa11.08□□□□□ -0.64
RNF4-214ENST00000511600 ZCCHC6Q5VYS8 1495 aaKnown RBP11□□□□□ -0.65
RNF4-214ENST00000511600 ERICH6Q7L0X2 663 aa10.88□□□□□ -0.67
RNF4-214ENST00000511600 CENPBP07199 599 aaPredicted RBP10.86□□□□□ -0.67
RNF4-214ENST00000511600 DCAF1Q9Y4B6 1507 aa10.84□□□□□ -0.67
RNF4-214ENST00000511600 PCGF6Q9BYE7 350 aa10.83□□□□□ -0.68
RNF4-214ENST00000511600 ZEB1P37275 1124 aaPredicted RBP10.75□□□□□ -0.69
RNF4-214ENST00000511600 SHROOM4Q9ULL8 1493 aa10.73□□□□□ -0.69
RNF4-214ENST00000511600 PPARGC1BQ86YN6 1023 aaKnown RBP10.67□□□□□ -0.7
RNF4-214ENST00000511600 MYO15BQ96JP2 1530 aa10.62□□□□□ -0.71
RNF4-214ENST00000511600 PABPN1Q86U42 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
RNF4-214ENST00000511600 RB1CC1Q8TDY2 1594 aa10.59□□□□□ -0.71
RNF4-214ENST00000511600 SCAF1Q9H7N4 1312 aaKnown RBP10.59□□□□□ -0.71
RNF4-214ENST00000511600 BCL11AQ9H165 835 aa10.52□□□□□ -0.73
RNF4-214ENST00000511600 SUPT5HO00267 1087 aaKnown RBP10.5□□□□□ -0.73
RNF4-214ENST00000511600 GTF3C3Q9Y5Q9 886 aa10.49□□□□□ -0.73
RNF4-214ENST00000511600 ACIN1Q9UKV3 1341 aaKnown RBP10.48□□□□□ -0.73
RNF4-214ENST00000511600 NACADO15069 1562 aa10.47□□□□□ -0.73
RNF4-214ENST00000511600 DNAJC5BQ9UF47 199 aa10.44□□□□□ -0.74
RNF4-214ENST00000511600 PRKCSHP14314 528 aaPredicted RBP10.36□□□□□ -0.75
RNF4-214ENST00000511600 SCRIBQ14160 1630 aa10.35□□□□□ -0.75
RNF4-214ENST00000511600 CCER1Q8TC90 406 aaPredicted RBP10.34□□□□□ -0.75
RNF4-214ENST00000511600 TRIM26Q12899 539 aaPredicted RBP10.33□□□□□ -0.76
RNF4-214ENST00000511600 YTHDC1Q96MU7 727 aaKnown RBP10.27□□□□□ -0.77
RNF4-214ENST00000511600 ANP32EQ9BTT0 268 aa10.26□□□□□ -0.77
RNF4-214ENST00000511600 NEUROD1Q13562 356 aa10.24□□□□□ -0.77
RNF4-214ENST00000511600 FAM9AQ8IZU1 332 aaPredicted RBP10.17□□□□□ -0.78
RNF4-214ENST00000511600 DIEXFQ68CQ4 756 aaKnown RBP10.17□□□□□ -0.78
RNF4-214ENST00000511600 RSF1Q96T23 1441 aaPredicted RBP10.17□□□□□ -0.78
RNF4-214ENST00000511600 CECR2Q9BXF3 1484 aa10.15□□□□□ -0.78
RNF4-214ENST00000511600 MYT1LQ9UL68 1186 aa10.12□□□□□ -0.79
RNF4-214ENST00000511600 SLC24A1O60721 1099 aa10.1□□□□□ -0.79
RNF4-214ENST00000511600 PHF23Q9BUL5 403 aaPredicted RBP10.1□□□□□ -0.79
RNF4-214ENST00000511600 NEFLP07196 543 aa10.09□□□□□ -0.79
RNF4-214ENST00000511600 BAZ1AQ9NRL2 1556 aaPredicted RBP10.09□□□□□ -0.79
RNF4-214ENST00000511600 CLSPNQ9HAW4 1339 aa10.08□□□□□ -0.8
RNF4-214ENST00000511600 APLP2Q06481 763 aa10.03□□□□□ -0.8
RNF4-214ENST00000511600 MROH2BQ7Z745 1585 aa10.01□□□□□ -0.81
RNF4-214ENST00000511600 EIF5BO60841 1220 aaKnown RBP10.01□□□□□ -0.81
RNF4-214ENST00000511600 UNC13AQ9UPW8 1703 aa10□□□□□ -0.81
RNF4-214ENST00000511600 CSRNP3Q8WYN3 585 aa9.98□□□□□ -0.81
RNF4-214ENST00000511600 RTL5Q5HYW3 569 aaPredicted RBP9.97□□□□□ -0.81
RNF4-214ENST00000511600 GLIPR1L2Q4G1C9 344 aa9.97□□□□□ -0.81
RNF4-214ENST00000511600 SMARCA4P51532 1647 aa9.97□□□□□ -0.81
RNF4-214ENST00000511600 ERCC6Q03468 1493 aa9.96□□□□□ -0.82
RNF4-214ENST00000511600 WIZO95785 1651 aa9.95□□□□□ -0.82
RNF4-214ENST00000511600 CC2D2AQ9P2K1 1620 aa9.95□□□□□ -0.82
RNF4-214ENST00000511600 TOP2AP11388 1531 aaKnown RBP9.94□□□□□ -0.82
RNF4-214ENST00000511600 TRIM41Q8WV44 630 aa9.92□□□□□ -0.82
RNF4-214ENST00000511600 BICRAQ9NZM4 1560 aa9.92□□□□□ -0.82
RNF4-214ENST00000511600 EIF4G1Q04637 1599 aaKnown RBP9.91□□□□□ -0.82
RNF4-214ENST00000511600 DNAJC5Q9H3Z4 198 aa9.89□□□□□ -0.83
RNF4-214ENST00000511600 PEG3Q9GZU2 1588 aa9.84□□□□□ -0.83
RNF4-214ENST00000511600 EHMT2Q96KQ7 1210 aa9.84□□□□□ -0.83
RNF4-214ENST00000511600 ZNF316A6NFI3 1004 aaPredicted RBP9.82□□□□□ -0.84
RNF4-214ENST00000511600 SMARCA2P51531 1590 aa9.81□□□□□ -0.84
RNF4-214ENST00000511600 ERICH6BQ5W0A0 696 aa9.8□□□□□ -0.84
RNF4-214ENST00000511600 LOC105371045A0A1W2PR82 267 aa9.79□□□□□ -0.84
RNF4-214ENST00000511600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.79□□□□□ -0.84
RNF4-214ENST00000511600 BCANQ96GW7 911 aa9.79□□□□□ -0.84
RNF4-214ENST00000511600 CCDC88BA6NC98 1476 aa9.78□□□□□ -0.84
RNF4-214ENST00000511600 CDK11AQ9UQ88 783 aaPredicted RBP9.76□□□□□ -0.85
RNF4-214ENST00000511600 DAXXQ9UER7 740 aaPredicted RBP9.75□□□□□ -0.85
RNF4-214ENST00000511600 BAZ1BQ9UIG0 1483 aaKnown RBP9.73□□□□□ -0.85
RNF4-214ENST00000511600 TSHZ2Q9NRE2 1034 aa9.73□□□□□ -0.85
RNF4-214ENST00000511600 EEA1Q15075 1411 aa9.73□□□□□ -0.85
RNF4-214ENST00000511600 DEKP35659 375 aaKnown RBP9.72□□□□□ -0.85
RNF4-214ENST00000511600 ATAD2BQ9ULI0 1458 aa9.72□□□□□ -0.85
RNF4-214ENST00000511600 ANO8Q9HCE9 1232 aaPredicted RBP9.7□□□□□ -0.86
RNF4-214ENST00000511600 SUPT16HQ9Y5B9 1047 aaKnown RBP9.7□□□□□ -0.86
RNF4-214ENST00000511600 PKNOX2Q96KN3 472 aa9.67□□□□□ -0.86
RNF4-214ENST00000511600 CUX2O14529 1486 aa9.67□□□□□ -0.86
RNF4-214ENST00000511600 HMGXB3Q12766 1538 aa9.66□□□□□ -0.86
RNF4-214ENST00000511600 UBE2Q2Q8WVN8 375 aa9.66□□□□□ -0.86
RNF4-214ENST00000511600 PODXL2Q9NZ53 605 aa9.66□□□□□ -0.86
RNF4-214ENST00000511600 PDS5BQ9NTI5 1447 aa9.64□□□□□ -0.87
RNF4-214ENST00000511600 CCDC136Q96JN2 1154 aa9.64□□□□□ -0.87
RNF4-214ENST00000511600 FKBP8Q14318 412 aa9.64□□□□□ -0.87
RNF4-214ENST00000511600 NBR1Q14596 966 aa9.63□□□□□ -0.87
RNF4-214ENST00000511600 ABCC8Q09428 1581 aa9.63□□□□□ -0.87
RNF4-214ENST00000511600 WRNQ14191 1432 aaPredicted RBP eCLIP9.62□□□□□ -0.872e-6■■■■■ 29.9
RNF4-214ENST00000511600 NCAPD3P42695 1498 aa9.62□□□□□ -0.87
RNF4-214ENST00000511600 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
RNF4-214ENST00000511600 MIER1Q8N108 512 aa9.61□□□□□ -0.87
RNF4-214ENST00000511600 RBM19Q9Y4C8 960 aaKnown RBP9.61□□□□□ -0.87
RNF4-214ENST00000511600 RTN4Q9NQC3 1192 aaKnown RBP9.6□□□□□ -0.87
RNF4-214ENST00000511600 RANGAP1P46060 587 aaPredicted RBP9.6□□□□□ -0.87
RNF4-214ENST00000511600 ANP32AP39687 249 aaKnown RBP9.59□□□□□ -0.87
RNF4-214ENST00000511600 GOLGA3Q08378 1498 aa9.55□□□□□ -0.88
RNF4-214ENST00000511600 OSCARQ8IYS5 282 aa9.54□□□□□ -0.88
RNF4-214ENST00000511600 TNIKQ9UKE5 1360 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms