RNA–Protein interactions for RNA: ENST00000511130.6

CSNK1G3-206, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2 BASIC

Gene CSNK1G3, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-206ENST00000511130 LTKP29376 864 aa30.74■■■□□ 2.51
CSNK1G3-206ENST00000511130 NEXMIFQ5QGS0 1516 aa30.72■■■□□ 2.51
CSNK1G3-206ENST00000511130 NCKAP5LQ9HCH0 1330 aa30.71■■■□□ 2.51
CSNK1G3-206ENST00000511130 TXNDC2Q86VQ3 553 aa30.71■■■□□ 2.51
CSNK1G3-206ENST00000511130 RPGRIP1LQ68CZ1 1315 aa30.69■■■□□ 2.5
CSNK1G3-206ENST00000511130 L3MBTL2Q969R5 705 aa30.68■■■□□ 2.5
CSNK1G3-206ENST00000511130 SENP3Q9H4L4 574 aaPredicted RBP30.68■■■□□ 2.5
CSNK1G3-206ENST00000511130 ANKLE2Q86XL3 938 aa30.67■■■□□ 2.5
CSNK1G3-206ENST00000511130 DCAF11Q8TEB1 546 aa30.66■■■□□ 2.5
CSNK1G3-206ENST00000511130 EID1Q9Y6B2 187 aa30.66■■■□□ 2.5
CSNK1G3-206ENST00000511130 PPLO60437 1756 aa30.66■■■□□ 2.5
CSNK1G3-206ENST00000511130 KDM2AQ9Y2K7 1162 aa30.66■■■□□ 2.5
CSNK1G3-206ENST00000511130 IFT172Q9UG01 1749 aa30.64■■■□□ 2.5
CSNK1G3-206ENST00000511130 SCAF11Q99590 1463 aaKnown RBP30.64■■■□□ 2.5
CSNK1G3-206ENST00000511130 PPP1R15AO75807 674 aaPredicted RBP30.64■■■□□ 2.5
CSNK1G3-206ENST00000511130 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.64■■■□□ 2.5
CSNK1G3-206ENST00000511130 HDGFP51858 240 aaKnown RBP30.63■■■□□ 2.49
CSNK1G3-206ENST00000511130 TONSLQ96HA7 1378 aa30.63■■■□□ 2.49
CSNK1G3-206ENST00000511130 ADGRF5Q8IZF2 1346 aa30.62■■■□□ 2.49
CSNK1G3-206ENST00000511130 STRCQ7RTU9 1775 aa30.62■■■□□ 2.49
CSNK1G3-206ENST00000511130 VGFO15240 615 aaPredicted RBP30.59■■■□□ 2.49
CSNK1G3-206ENST00000511130 POLR1AO95602 1720 aaPredicted RBP30.58■■■□□ 2.49
CSNK1G3-206ENST00000511130 MYOM2P54296 1465 aa30.55■■■□□ 2.48
CSNK1G3-206ENST00000511130 PLEKHG1Q9ULL1 1385 aa30.55■■■□□ 2.48
CSNK1G3-206ENST00000511130 NPHP4O75161 1426 aaPredicted RBP30.55■■■□□ 2.48
CSNK1G3-206ENST00000511130 MED14O60244 1454 aa30.54■■■□□ 2.48
CSNK1G3-206ENST00000511130 BCANQ96GW7 911 aa30.54■■■□□ 2.48
CSNK1G3-206ENST00000511130 NRXN1Q9ULB1 1477 aa30.51■■■□□ 2.47
CSNK1G3-206ENST00000511130 SLC26A8Q96RN1 970 aa30.49■■■□□ 2.47
CSNK1G3-206ENST00000511130 TIMELESSQ9UNS1 1208 aa30.49■■■□□ 2.47
CSNK1G3-206ENST00000511130 NRXN3Q9Y4C0 1643 aa30.48■■■□□ 2.47
CSNK1G3-206ENST00000511130 STAC3Q96MF2 364 aa30.48■■■□□ 2.47
CSNK1G3-206ENST00000511130 IQGAP1P46940 1657 aa30.48■■■□□ 2.47
CSNK1G3-206ENST00000511130 PIK3C2GO75747 1445 aa30.47■■■□□ 2.47
CSNK1G3-206ENST00000511130 ADAMTS13Q76LX8 1427 aa30.47■■■□□ 2.47
CSNK1G3-206ENST00000511130 SETBP1Q9Y6X0 1596 aa30.46■■■□□ 2.47
CSNK1G3-206ENST00000511130 NBPF8Q3BBV2 869 aa30.46■■■□□ 2.47
CSNK1G3-206ENST00000511130 PRAG1Q86YV5 1406 aa30.45■■■□□ 2.46
CSNK1G3-206ENST00000511130 CFAP70Q5T0N1 1121 aa30.43■■■□□ 2.46
CSNK1G3-206ENST00000511130 ALKQ9UM73 1620 aa30.41■■■□□ 2.46
CSNK1G3-206ENST00000511130 C14orf93Q9H972 538 aaKnown RBP30.4■■■□□ 2.46
CSNK1G3-206ENST00000511130 TBX22Q9Y458 520 aa30.4■■■□□ 2.46
CSNK1G3-206ENST00000511130 DMRT2Q9Y5R5 561 aa30.39■■■□□ 2.45
CSNK1G3-206ENST00000511130 METP08581 1390 aa30.37■■■□□ 2.45
CSNK1G3-206ENST00000511130 SETD1AO15047 1707 aaKnown RBP30.36■■■□□ 2.45
CSNK1G3-206ENST00000511130 TMEM132EQ6IEE7 984 aa30.35■■■□□ 2.45
CSNK1G3-206ENST00000511130 NBPF1Q3BBV0 1214 aa30.34■■■□□ 2.45
CSNK1G3-206ENST00000511130 DIP2AQ14689 1571 aa30.33■■■□□ 2.45
CSNK1G3-206ENST00000511130 ASXL1Q8IXJ9 1541 aa30.32■■■□□ 2.44
CSNK1G3-206ENST00000511130 PTPRUQ92729 1446 aa30.3■■■□□ 2.44
CSNK1G3-206ENST00000511130 LAMC1P11047 1609 aa30.29■■■□□ 2.44
CSNK1G3-206ENST00000511130 TRPM1Q7Z4N2 1603 aa30.29■■■□□ 2.44
CSNK1G3-206ENST00000511130 ADGRB1O14514 1584 aa30.27■■■□□ 2.44
CSNK1G3-206ENST00000511130 KIAA1210Q9ULL0 1709 aa30.27■■■□□ 2.44
CSNK1G3-206ENST00000511130 ZNF335Q9H4Z2 1342 aaPredicted RBP30.26■■■□□ 2.43
CSNK1G3-206ENST00000511130 STK26Q9P289 416 aa30.24■■■□□ 2.43
CSNK1G3-206ENST00000511130 RALGAPBQ86X10 1494 aa30.23■■■□□ 2.43
CSNK1G3-206ENST00000511130 PIK3R4Q99570 1358 aa30.23■■■□□ 2.43
CSNK1G3-206ENST00000511130 AMOTL2Q9Y2J4 779 aa30.23■■■□□ 2.43
CSNK1G3-206ENST00000511130 KCNA6P17658 529 aa30.22■■■□□ 2.43
CSNK1G3-206ENST00000511130 ROCK2O75116 1388 aaKnown RBP30.21■■■□□ 2.43
CSNK1G3-206ENST00000511130 CHD2O14647 1828 aaKnown RBP30.21■■■□□ 2.43
CSNK1G3-206ENST00000511130 STRCP1A6NGW2 1772 aa30.21■■■□□ 2.43
CSNK1G3-206ENST00000511130 YTHDC2Q9H6S0 1430 aaKnown RBP30.2■■■□□ 2.43
CSNK1G3-206ENST00000511130 LRPPRCP42704 1394 aaKnown RBP30.2■■■□□ 2.42
CSNK1G3-206ENST00000511130 TRAK1Q9UPV9 953 aa30.16■■■□□ 2.42
CSNK1G3-206ENST00000511130 GPRASP1Q5JY77 1395 aa30.16■■■□□ 2.42
CSNK1G3-206ENST00000511130 NWD1Q149M9 1564 aa30.16■■■□□ 2.42
CSNK1G3-206ENST00000511130 XRN1Q8IZH2 1706 aaKnown RBP30.16■■■□□ 2.42
CSNK1G3-206ENST00000511130 CARD11Q9BXL7 1154 aa30.15■■■□□ 2.42
CSNK1G3-206ENST00000511130 ABCC11Q96J66 1382 aa30.14■■■□□ 2.42
CSNK1G3-206ENST00000511130 ZEB1P37275 1124 aaPredicted RBP30.14■■■□□ 2.41
CSNK1G3-206ENST00000511130 ROBO2Q9HCK4 1378 aa30.12■■■□□ 2.41
CSNK1G3-206ENST00000511130 RBM33Q96EV2 1170 aaKnown RBP30.12■■■□□ 2.41
CSNK1G3-206ENST00000511130 TECPR2O15040 1411 aa30.1■■■□□ 2.41
CSNK1G3-206ENST00000511130 LTBP4Q8N2S1 1624 aa30.09■■■□□ 2.41
CSNK1G3-206ENST00000511130 WAPLQ7Z5K2 1190 aa30.08■■■□□ 2.41
CSNK1G3-206ENST00000511130 KNDC1Q76NI1 1749 aa30.07■■■□□ 2.4
CSNK1G3-206ENST00000511130 PROSER2Q86WR7 435 aaPredicted RBP30.07■■■□□ 2.4
CSNK1G3-206ENST00000511130 PLEKHH1Q9ULM0 1364 aa30.07■■■□□ 2.4
CSNK1G3-206ENST00000511130 NKTRP30414 1462 aaKnown RBP30.06■■■□□ 2.4
CSNK1G3-206ENST00000511130 CPS1P31327 1500 aa30.06■■■□□ 2.4
CSNK1G3-206ENST00000511130 PTCH1Q13635 1447 aa30.05■■■□□ 2.4
CSNK1G3-206ENST00000511130 PRAM1Q96QH2 718 aa30.04■■■□□ 2.4
CSNK1G3-206ENST00000511130 DLC1Q96QB1 1528 aa30.04■■■□□ 2.4
CSNK1G3-206ENST00000511130 LRRC7Q96NW7 1537 aa30.03■■■□□ 2.4
CSNK1G3-206ENST00000511130 ARHGEF28Q8N1W1 1705 aaKnown RBP30.03■■■□□ 2.4
CSNK1G3-206ENST00000511130 SAFB2Q14151 953 aaKnown RBP eCLIP30.03■■■□□ 2.4
CSNK1G3-206ENST00000511130 SIRT1Q96EB6 747 aa30.03■■■□□ 2.4
CSNK1G3-206ENST00000511130 TMEM94Q12767 1356 aa30.01■■■□□ 2.39
CSNK1G3-206ENST00000511130 FAM135BQ49AJ0 1406 aa30■■■□□ 2.39
CSNK1G3-206ENST00000511130 POGKQ9P215 609 aa30■■■□□ 2.39
CSNK1G3-206ENST00000511130 USP47Q96K76 1375 aa29.97■■■□□ 2.39
CSNK1G3-206ENST00000511130 XIRP1Q702N8 1843 aaKnown RBP29.95■■■□□ 2.38
CSNK1G3-206ENST00000511130 CENPJQ9HC77 1338 aaPredicted RBP29.95■■■□□ 2.38
CSNK1G3-206ENST00000511130 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.94■■■□□ 2.38
CSNK1G3-206ENST00000511130 ST20-MTHFSA0A0A6YYL1 179 aa29.93■■■□□ 2.38
CSNK1G3-206ENST00000511130 EIF3AQ14152 1382 aaKnown RBP29.92■■■□□ 2.38
CSNK1G3-206ENST00000511130 MINK1Q8N4C8 1332 aaPredicted RBP29.92■■■□□ 2.38
CSNK1G3-206ENST00000511130 HSPA5P11021 654 aaKnown RBP29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms