RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 CHMP5Q9NZZ3 219 aa11.41□□□□□ -0.58
TRIO-214ENST00000509967 NPHP1O15259 732 aa11.41□□□□□ -0.58
TRIO-214ENST00000509967 DZIP1LQ8IYY4 767 aaKnown RBP11.41□□□□□ -0.58
TRIO-214ENST00000509967 NGDNQ8NEJ9 315 aaKnown RBP11.41□□□□□ -0.58
TRIO-214ENST00000509967 SLKQ9H2G2 1235 aaPredicted RBP11.41□□□□□ -0.58
TRIO-214ENST00000509967 C9orf84Q5VXU9 1444 aa11.41□□□□□ -0.58
TRIO-214ENST00000509967 GSE1Q14687 1217 aa11.4□□□□□ -0.58
TRIO-214ENST00000509967 SENP3-EIF4A1A0A087X0R7 540 aa11.4□□□□□ -0.58
TRIO-214ENST00000509967 THOC2Q8NI27 1593 aaKnown RBP11.4□□□□□ -0.58
TRIO-214ENST00000509967 TRAK1Q9UPV9 953 aa11.4□□□□□ -0.58
TRIO-214ENST00000509967 DAPK1P53355 1430 aa11.4□□□□□ -0.59
TRIO-214ENST00000509967 CCDC146Q8IYE0 955 aa11.4□□□□□ -0.59
TRIO-214ENST00000509967 CRBNQ96SW2 442 aa11.4□□□□□ -0.59
TRIO-214ENST00000509967 CCDC141Q6ZP82 1450 aa11.39□□□□□ -0.59
TRIO-214ENST00000509967 SMG6Q86US8 1419 aaKnown RBP11.39□□□□□ -0.59
TRIO-214ENST00000509967 KIAA0586Q9BVV6 1533 aa11.39□□□□□ -0.59
TRIO-214ENST00000509967 NUCB2P80303 420 aa11.39□□□□□ -0.59
TRIO-214ENST00000509967 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.39□□□□□ -0.59
TRIO-214ENST00000509967 RPGRIP1LQ68CZ1 1315 aa11.39□□□□□ -0.59
TRIO-214ENST00000509967 TRIM6-TRIM34B2RNG4 842 aa11.39□□□□□ -0.59
TRIO-214ENST00000509967 URB2Q14146 1524 aaKnown RBP11.39□□□□□ -0.59
TRIO-214ENST00000509967 AKNAQ7Z591 1439 aa11.39□□□□□ -0.59
TRIO-214ENST00000509967 EXOC6Q8TAG9 804 aa11.39□□□□□ -0.59
TRIO-214ENST00000509967 PDE3AQ14432 1141 aa11.38□□□□□ -0.59
TRIO-214ENST00000509967 ISY1Q9ULR0 285 aaKnown RBP11.38□□□□□ -0.59
TRIO-214ENST00000509967 GORABQ5T7V8 394 aa11.38□□□□□ -0.59
TRIO-214ENST00000509967 AEBP2Q6ZN18 517 aaPredicted RBP11.37□□□□□ -0.59
TRIO-214ENST00000509967 CSB-PGBD3P0DP91 1061 aa11.37□□□□□ -0.59
TRIO-214ENST00000509967 BIVM-ERCC5R4GMW8 1640 aa11.37□□□□□ -0.59
TRIO-214ENST00000509967 ZNF428Q96B54 188 aa11.37□□□□□ -0.59
TRIO-214ENST00000509967 INTS3Q68E01 1043 aaKnown RBP11.36□□□□□ -0.59
TRIO-214ENST00000509967 CLUAP1Q96AJ1 413 aa11.36□□□□□ -0.59
TRIO-214ENST00000509967 ANKRD30BQ9BXX2 1392 aa11.36□□□□□ -0.59
TRIO-214ENST00000509967 APAF1O14727 1248 aa11.35□□□□□ -0.59
TRIO-214ENST00000509967 PAK3O75914 559 aaPredicted RBP11.35□□□□□ -0.59
TRIO-214ENST00000509967 IQGAP2Q13576 1575 aa11.35□□□□□ -0.59
TRIO-214ENST00000509967 SENP3Q9H4L4 574 aaPredicted RBP11.35□□□□□ -0.59
TRIO-214ENST00000509967 DDX58O95786 925 aaKnown RBP11.35□□□□□ -0.59
TRIO-214ENST00000509967 TAF7LQ5H9L4 462 aa11.35□□□□□ -0.59
TRIO-214ENST00000509967 C1orf141Q5JVX7 400 aa11.35□□□□□ -0.59
TRIO-214ENST00000509967 RNF20Q5VTR2 975 aa11.35□□□□□ -0.59
TRIO-214ENST00000509967 NEXNQ0ZGT2 675 aa11.34□□□□□ -0.59
TRIO-214ENST00000509967 CPLX2Q6PUV4 134 aaKnown RBP11.34□□□□□ -0.59
TRIO-214ENST00000509967 MAGI1Q96QZ7 1491 aaPredicted RBP11.34□□□□□ -0.59
TRIO-214ENST00000509967 ZKSCAN1P17029 563 aaPredicted RBP11.34□□□□□ -0.59
TRIO-214ENST00000509967 MCM2P49736 904 aa11.34□□□□□ -0.59
TRIO-214ENST00000509967 ANO8Q9HCE9 1232 aaPredicted RBP11.34□□□□□ -0.59
TRIO-214ENST00000509967 HSP90B1P14625 803 aaKnown RBP11.34□□□□□ -0.59
TRIO-214ENST00000509967 ANKRD45Q5TZF3 282 aa11.33□□□□□ -0.6
TRIO-214ENST00000509967 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
TRIO-214ENST00000509967 EPRSP07814 1512 aaKnown RBP11.33□□□□□ -0.6
TRIO-214ENST00000509967 TPM3P06753 285 aa11.33□□□□□ -0.6
TRIO-214ENST00000509967 SLC4A10Q6U841 1118 aa11.32□□□□□ -0.6
TRIO-214ENST00000509967 TMX4Q9H1E5 349 aaPredicted RBP11.32□□□□□ -0.6
TRIO-214ENST00000509967 DDX49Q9Y6V7 483 aaKnown RBP11.32□□□□□ -0.6
TRIO-214ENST00000509967 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
TRIO-214ENST00000509967 ERC2O15083 957 aa11.32□□□□□ -0.6
TRIO-214ENST00000509967 DHX8Q14562 1220 aaKnown RBP11.32□□□□□ -0.6
TRIO-214ENST00000509967 APBB1O00213 710 aa11.32□□□□□ -0.6
TRIO-214ENST00000509967 WDR63Q8IWG1 891 aa11.32□□□□□ -0.6
TRIO-214ENST00000509967 DIAPH3Q9NSV4 1193 aa11.32□□□□□ -0.6
TRIO-214ENST00000509967 SOX12O15370 315 aa11.32□□□□□ -0.6
TRIO-214ENST00000509967 PDIA4P13667 645 aaKnown RBP11.32□□□□□ -0.6
TRIO-214ENST00000509967 IL27Q8NEV9 243 aa11.32□□□□□ -0.6
TRIO-214ENST00000509967 NAIPQ13075 1403 aa11.32□□□□□ -0.6
TRIO-214ENST00000509967 RIPK4P57078 832 aa11.31□□□□□ -0.6
TRIO-214ENST00000509967 TEFQ10587 303 aa11.31□□□□□ -0.6
TRIO-214ENST00000509967 COG6Q9Y2V7 657 aa11.31□□□□□ -0.6
TRIO-214ENST00000509967 CDC45O75419 566 aa11.31□□□□□ -0.6
TRIO-214ENST00000509967 PCF11O94913 1555 aaKnown RBP11.31□□□□□ -0.6
TRIO-214ENST00000509967 ERBINQ96RT1 1412 aa11.31□□□□□ -0.6
TRIO-214ENST00000509967 LETM1O95202 739 aaPredicted RBP11.31□□□□□ -0.6
TRIO-214ENST00000509967 GCC1Q96CN9 775 aa11.31□□□□□ -0.6
TRIO-214ENST00000509967 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
TRIO-214ENST00000509967 GOLGA6L1Q8N7Z2 621 aa11.3□□□□□ -0.6
TRIO-214ENST00000509967 HOOK1Q9UJC3 728 aaKnown RBP11.3□□□□□ -0.6
TRIO-214ENST00000509967 PTPN23Q9H3S7 1636 aa11.3□□□□□ -0.6
TRIO-214ENST00000509967 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.3□□□□□ -0.61e-6■■■□□ 16.4
TRIO-214ENST00000509967 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
TRIO-214ENST00000509967 MTERF4Q7Z6M4 381 aaKnown RBP11.3□□□□□ -0.6
TRIO-214ENST00000509967 GZF1Q9H116 711 aaPredicted RBP11.3□□□□□ -0.6
TRIO-214ENST00000509967 SLC52A1Q9NWF4 448 aa11.29□□□□□ -0.6
TRIO-214ENST00000509967 ATAD2Q6PL18 1390 aa11.29□□□□□ -0.6
TRIO-214ENST00000509967 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.29□□□□□ -0.6
TRIO-214ENST00000509967 KIF14Q15058 1648 aa11.29□□□□□ -0.6
TRIO-214ENST00000509967 GOLGA6L19H0YKK7 550 aa11.29□□□□□ -0.6
TRIO-214ENST00000509967 H3BQV1 296 aa11.29□□□□□ -0.6
TRIO-214ENST00000509967 SF3A1Q15459 793 aaKnown RBP11.29□□□□□ -0.6
TRIO-214ENST00000509967 IFFO2Q5TF58 517 aa11.29□□□□□ -0.6
TRIO-214ENST00000509967 FAM184AQ8NB25 1140 aa11.29□□□□□ -0.6
TRIO-214ENST00000509967 HIP1O00291 1037 aa11.28□□□□□ -0.6
TRIO-214ENST00000509967 TPM1P09493 284 aa11.28□□□□□ -0.6
TRIO-214ENST00000509967 GNAI3P08754 354 aa11.28□□□□□ -0.6
TRIO-214ENST00000509967 PPP2R1AP30153 589 aa11.28□□□□□ -0.6
TRIO-214ENST00000509967 TPRNQ4KMQ1 711 aa11.28□□□□□ -0.6
TRIO-214ENST00000509967 GAS2L2Q8NHY3 880 aa11.28□□□□□ -0.6
TRIO-214ENST00000509967 MBD3O95983 291 aa11.27□□□□□ -0.6
TRIO-214ENST00000509967 MRE11P49959 708 aa11.27□□□□□ -0.6
TRIO-214ENST00000509967 SYNE3Q6ZMZ3 975 aa11.27□□□□□ -0.61
TRIO-214ENST00000509967 TPM2P07951 284 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 330.4 ms