RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 ZC3H13Q5T200 1668 aaKnown RBP12.5□□□□□ -0.41
SEC24D-209ENST00000509818 POLR3GLQ9BT43 218 aa12.49□□□□□ -0.41
SEC24D-209ENST00000509818 ARHGAP31Q2M1Z3 1444 aa12.49□□□□□ -0.41
SEC24D-209ENST00000509818 UGGT1Q9NYU2 1555 aa12.48□□□□□ -0.41
SEC24D-209ENST00000509818 MYOM2P54296 1465 aa12.48□□□□□ -0.41
SEC24D-209ENST00000509818 PRKRIP1Q9H875 184 aaPredicted RBP12.48□□□□□ -0.41
SEC24D-209ENST00000509818 KIAA1210Q9ULL0 1709 aa12.47□□□□□ -0.41
SEC24D-209ENST00000509818 NOS1P29475 1434 aa12.47□□□□□ -0.41
SEC24D-209ENST00000509818 CFAP65Q6ZU64 1925 aaKnown RBP12.47□□□□□ -0.41
SEC24D-209ENST00000509818 PPP6R1Q9UPN7 881 aa12.47□□□□□ -0.41
SEC24D-209ENST00000509818 RPGRIP1LQ68CZ1 1315 aa12.47□□□□□ -0.41
SEC24D-209ENST00000509818 PREX1Q8TCU6 1659 aa12.46□□□□□ -0.41
SEC24D-209ENST00000509818 ADGRB3O60242 1522 aa12.46□□□□□ -0.42
SEC24D-209ENST00000509818 CHGAP10645 457 aaKnown RBP12.45□□□□□ -0.42
SEC24D-209ENST00000509818 CLTCQ00610 1675 aaKnown RBP12.45□□□□□ -0.42
SEC24D-209ENST00000509818 IFT172Q9UG01 1749 aa12.44□□□□□ -0.42
SEC24D-209ENST00000509818 TMF1P82094 1093 aa12.44□□□□□ -0.42
SEC24D-209ENST00000509818 TESK2Q96S53 571 aa12.44□□□□□ -0.42
SEC24D-209ENST00000509818 ESF1Q9H501 851 aaKnown RBP12.44□□□□□ -0.42
SEC24D-209ENST00000509818 MROH2AA6NES4 1674 aa12.44□□□□□ -0.42
SEC24D-209ENST00000509818 SCAF11Q99590 1463 aaKnown RBP12.44□□□□□ -0.42
SEC24D-209ENST00000509818 ZMYM3Q14202 1370 aa12.43□□□□□ -0.42
SEC24D-209ENST00000509818 IQGAP1P46940 1657 aa12.43□□□□□ -0.42
SEC24D-209ENST00000509818 NRXN1Q9ULB1 1477 aa12.43□□□□□ -0.42
SEC24D-209ENST00000509818 ILDR1Q86SU0 546 aaPredicted RBP12.43□□□□□ -0.42
SEC24D-209ENST00000509818 SLC52A1Q9NWF4 448 aa12.43□□□□□ -0.42
SEC24D-209ENST00000509818 ADGRF5Q8IZF2 1346 aa12.43□□□□□ -0.42
SEC24D-209ENST00000509818 EIF3AQ14152 1382 aaKnown RBP12.42□□□□□ -0.42
SEC24D-209ENST00000509818 SLC24A1O60721 1099 aa12.42□□□□□ -0.42
SEC24D-209ENST00000509818 PIK3C2BO00750 1634 aa12.42□□□□□ -0.42
SEC24D-209ENST00000509818 CFAP70Q5T0N1 1121 aa12.41□□□□□ -0.42
SEC24D-209ENST00000509818 SYNMO15061 1565 aa12.41□□□□□ -0.42
SEC24D-209ENST00000509818 PPLO60437 1756 aa12.41□□□□□ -0.42
SEC24D-209ENST00000509818 CDCA8Q53HL2 280 aa12.4□□□□□ -0.42
SEC24D-209ENST00000509818 SETD1BQ9UPS6 1966 aaKnown RBP12.4□□□□□ -0.42
SEC24D-209ENST00000509818 STRCQ7RTU9 1775 aa12.4□□□□□ -0.42
SEC24D-209ENST00000509818 KTN1Q86UP2 1357 aaKnown RBP12.39□□□□□ -0.43
SEC24D-209ENST00000509818 DISP3Q9P2K9 1392 aa12.39□□□□□ -0.43
SEC24D-209ENST00000509818 VGFO15240 615 aaPredicted RBP12.39□□□□□ -0.43
SEC24D-209ENST00000509818 IDI1Q13907 227 aa12.39□□□□□ -0.43
SEC24D-209ENST00000509818 C14orf93Q9H972 538 aaKnown RBP12.38□□□□□ -0.43
SEC24D-209ENST00000509818 MRS2Q9HD23 443 aa12.38□□□□□ -0.43
SEC24D-209ENST00000509818 SETBP1Q9Y6X0 1596 aa12.37□□□□□ -0.43
SEC24D-209ENST00000509818 RALBP1Q15311 655 aa12.37□□□□□ -0.43
SEC24D-209ENST00000509818 PIK3C2GO75747 1445 aa12.36□□□□□ -0.43
SEC24D-209ENST00000509818 CCDC184Q52MB2 194 aa12.36□□□□□ -0.43
SEC24D-209ENST00000509818 FBXO31Q5XUX0 539 aaPredicted RBP12.36□□□□□ -0.43
SEC24D-209ENST00000509818 MYO3AQ8NEV4 1616 aa12.35□□□□□ -0.43
SEC24D-209ENST00000509818 ZFYVE9O95405 1425 aa12.35□□□□□ -0.43
SEC24D-209ENST00000509818 ERVK-7P63135 1459 aa12.35□□□□□ -0.43
SEC24D-209ENST00000509818 NEXMIFQ5QGS0 1516 aa12.34□□□□□ -0.43
SEC24D-209ENST00000509818 PER1O15534 1290 aaPredicted RBP12.34□□□□□ -0.43
SEC24D-209ENST00000509818 PANK3Q9H999 370 aa12.34□□□□□ -0.43
SEC24D-209ENST00000509818 TMEM131LA2VDJ0 1609 aa12.33□□□□□ -0.44
SEC24D-209ENST00000509818 HNRNPUQ00839 825 aaKnown RBP eCLIP12.32□□□□□ -0.44
SEC24D-209ENST00000509818 CEP170BQ9Y4F5 1589 aaPredicted RBP12.32□□□□□ -0.44
SEC24D-209ENST00000509818 CNGB1Q14028 1251 aaPredicted RBP12.31□□□□□ -0.44
SEC24D-209ENST00000509818 FAM9BQ8IZU0 186 aa12.31□□□□□ -0.44
SEC24D-209ENST00000509818 MYBBP1AQ9BQG0 1328 aaKnown RBP12.31□□□□□ -0.44
SEC24D-209ENST00000509818 SBNO2Q9Y2G9 1366 aa12.31□□□□□ -0.44
SEC24D-209ENST00000509818 ZNF142P52746 1687 aaPredicted RBP12.31□□□□□ -0.44
SEC24D-209ENST00000509818 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
SEC24D-209ENST00000509818 ADGRB1O14514 1584 aa12.3□□□□□ -0.44
SEC24D-209ENST00000509818 SPATA31D1Q6ZQQ2 1576 aa12.3□□□□□ -0.44
SEC24D-209ENST00000509818 CENPJQ9HC77 1338 aaPredicted RBP12.3□□□□□ -0.44
SEC24D-209ENST00000509818 TMC1Q8TDI8 760 aa12.3□□□□□ -0.44
SEC24D-209ENST00000509818 BRD4O60885 1362 aaPredicted RBP12.3□□□□□ -0.44
SEC24D-209ENST00000509818 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
SEC24D-209ENST00000509818 MYO5BQ9ULV0 1848 aa12.29□□□□□ -0.44
SEC24D-209ENST00000509818 KDM5AP29375 1690 aaKnown RBP12.29□□□□□ -0.44
SEC24D-209ENST00000509818 PARD3Q8TEW0 1356 aa12.29□□□□□ -0.44
SEC24D-209ENST00000509818 TNRQ92752 1358 aa12.29□□□□□ -0.44
SEC24D-209ENST00000509818 NUTM2DQ5VT03 806 aaPredicted RBP12.29□□□□□ -0.44
SEC24D-209ENST00000509818 TRAK1Q9UPV9 953 aa12.29□□□□□ -0.44
SEC24D-209ENST00000509818 TMEM132EQ6IEE7 984 aa12.28□□□□□ -0.44
SEC24D-209ENST00000509818 KNSTRNQ9Y448 316 aa12.27□□□□□ -0.44
SEC24D-209ENST00000509818 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.44
SEC24D-209ENST00000509818 NLRP13Q86W25 1043 aa12.27□□□□□ -0.45
SEC24D-209ENST00000509818 FBXO41Q8TF61 875 aa12.27□□□□□ -0.45
SEC24D-209ENST00000509818 CERKQ8TCT0 537 aa12.26□□□□□ -0.45
SEC24D-209ENST00000509818 PNISRQ8TF01 805 aaKnown RBP12.26□□□□□ -0.45
SEC24D-209ENST00000509818 PUS7Q96PZ0 661 aaKnown RBP12.25□□□□□ -0.45
SEC24D-209ENST00000509818 DMRT2Q9Y5R5 561 aa12.25□□□□□ -0.45
SEC24D-209ENST00000509818 CC2D1BQ5T0F9 858 aaKnown RBP12.25□□□□□ -0.45
SEC24D-209ENST00000509818 QRICH2Q9H0J4 1663 aa12.24□□□□□ -0.45
SEC24D-209ENST00000509818 MYOM1P52179 1685 aa12.24□□□□□ -0.45
SEC24D-209ENST00000509818 ZBED9Q6R2W3 1325 aa12.24□□□□□ -0.45
SEC24D-209ENST00000509818 LTBP4Q8N2S1 1624 aa12.23□□□□□ -0.45
SEC24D-209ENST00000509818 HDGFP51858 240 aaKnown RBP12.23□□□□□ -0.45
SEC24D-209ENST00000509818 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.23□□□□□ -0.45
SEC24D-209ENST00000509818 NPC1L1Q9UHC9 1359 aa12.23□□□□□ -0.45
SEC24D-209ENST00000509818 RIMS2Q9UQ26 1411 aa12.22□□□□□ -0.45
SEC24D-209ENST00000509818 AMER1Q5JTC6 1135 aaPredicted RBP12.22□□□□□ -0.45
SEC24D-209ENST00000509818 ASXL1Q8IXJ9 1541 aa12.22□□□□□ -0.45
SEC24D-209ENST00000509818 EVC2Q86UK5 1308 aa12.22□□□□□ -0.45
SEC24D-209ENST00000509818 LRPPRCP42704 1394 aaKnown RBP12.21□□□□□ -0.45
SEC24D-209ENST00000509818 ARHGEF28Q8N1W1 1705 aaKnown RBP12.21□□□□□ -0.45
SEC24D-209ENST00000509818 ZNF335Q9H4Z2 1342 aaPredicted RBP12.21□□□□□ -0.45
SEC24D-209ENST00000509818 NLRP1Q9C000 1473 aa12.21□□□□□ -0.46
SEC24D-209ENST00000509818 ALKQ9UM73 1620 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms