RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	ADGRB3	O60242	1522 aa		13.7	□□□□□ -0.22
RACK1-222	ENST00000509535	BCAN	Q96GW7	911 aa		13.7	□□□□□ -0.22
RACK1-222	ENST00000509535	AFF2	P51816	1311 aa		13.69	□□□□□ -0.22
RACK1-222	ENST00000509535	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.69	□□□□□ -0.22
RACK1-222	ENST00000509535	NUTM2E	B1AL46	878 aa	Predicted RBP	13.69	□□□□□ -0.22
RACK1-222	ENST00000509535	IDI1	Q13907	227 aa		13.69	□□□□□ -0.22
RACK1-222	ENST00000509535	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.69	□□□□□ -0.22
RACK1-222	ENST00000509535	RGS12	O14924	1447 aa		13.69	□□□□□ -0.22
RACK1-222	ENST00000509535	CROCC2	H7BZ55	1655 aa		13.68	□□□□□ -0.22
RACK1-222	ENST00000509535	EP400	Q96L91	3159 aa		13.67	□□□□□ -0.22
RACK1-222	ENST00000509535	GCC2	Q8IWJ2	1684 aa		13.66	□□□□□ -0.22
RACK1-222	ENST00000509535	C14orf37	Q86TY3	774 aa		13.66	□□□□□ -0.22
RACK1-222	ENST00000509535	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
RACK1-222	ENST00000509535	ERBIN	Q96RT1	1412 aa		13.65	□□□□□ -0.22
RACK1-222	ENST00000509535	NCOA3	Q9Y6Q9	1424 aa		13.65	□□□□□ -0.22
RACK1-222	ENST00000509535	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.65	□□□□□ -0.22
RACK1-222	ENST00000509535	NHSL1	Q5SYE7	1610 aa		13.64	□□□□□ -0.23
RACK1-222	ENST00000509535	SETBP1	Q9Y6X0	1596 aa		13.64	□□□□□ -0.23
RACK1-222	ENST00000509535	KANK1	Q14678	1352 aa		13.64	□□□□□ -0.23
RACK1-222	ENST00000509535	KIF15	Q9NS87	1388 aa		13.64	□□□□□ -0.23
RACK1-222	ENST00000509535	RBM6	P78332	1123 aa	Known RBP	13.63	□□□□□ -0.23
RACK1-222	ENST00000509535	CADPS2	Q86UW7	1296 aa		13.63	□□□□□ -0.23
RACK1-222	ENST00000509535	LMTK2	Q8IWU2	1503 aa		13.63	□□□□□ -0.23
RACK1-222	ENST00000509535	PLEKHG1	Q9ULL1	1385 aa		13.62	□□□□□ -0.23
RACK1-222	ENST00000509535	ATF3	P18847	181 aa		13.62	□□□□□ -0.23
RACK1-222	ENST00000509535	QTRT2	Q9H974	415 aa	Known RBP	13.62	□□□□□ -0.23
RACK1-222	ENST00000509535	ZRANB1	Q9UGI0	708 aa		13.62	□□□□□ -0.23
RACK1-222	ENST00000509535	ZFYVE9	O95405	1425 aa		13.62	□□□□□ -0.23
RACK1-222	ENST00000509535	NOS1	P29475	1434 aa		13.62	□□□□□ -0.23
RACK1-222	ENST00000509535	BRINP3	Q76B58	766 aa		13.61	□□□□□ -0.23
RACK1-222	ENST00000509535	C19orf44	Q9H6X5	657 aa		13.61	□□□□□ -0.23
RACK1-222	ENST00000509535	MYOM3	Q5VTT5	1437 aa		13.61	□□□□□ -0.23
RACK1-222	ENST00000509535	ATAD2	Q6PL18	1390 aa		13.6	□□□□□ -0.23
RACK1-222	ENST00000509535	ASXL1	Q8IXJ9	1541 aa		13.6	□□□□□ -0.23
RACK1-222	ENST00000509535	LOC105371045	A0A1W2PR82	267 aa		13.6	□□□□□ -0.23
RACK1-222	ENST00000509535	FOXD1	Q16676	465 aa		13.6	□□□□□ -0.23
RACK1-222	ENST00000509535	C8orf37	Q96NL8	207 aa		13.6	□□□□□ -0.23
RACK1-222	ENST00000509535	SETD5	Q9C0A6	1442 aa		13.59	□□□□□ -0.23
RACK1-222	ENST00000509535	PPP1R15A	O75807	674 aa	Predicted RBP	13.59	□□□□□ -0.23
RACK1-222	ENST00000509535	RRP7BP	Q9NSQ0	103 aa		13.59	□□□□□ -0.23
RACK1-222	ENST00000509535	TMEM131L	A2VDJ0	1609 aa		13.59	□□□□□ -0.23
RACK1-222	ENST00000509535	RIMS2	Q9UQ26	1411 aa		13.58	□□□□□ -0.24
RACK1-222	ENST00000509535	SLC52A1	Q9NWF4	448 aa		13.58	□□□□□ -0.24
RACK1-222	ENST00000509535	TBX22	Q9Y458	520 aa		13.57	□□□□□ -0.24
RACK1-222	ENST00000509535	NGLY1	Q96IV0	654 aa		13.56	□□□□□ -0.24
RACK1-222	ENST00000509535	ADAMTS13	Q76LX8	1427 aa		13.55	□□□□□ -0.24
RACK1-222	ENST00000509535	HDGF	P51858	240 aa	Known RBP	13.54	□□□□□ -0.24
RACK1-222	ENST00000509535	LRRC59	Q96AG4	307 aa	Known RBP	13.54	□□□□□ -0.24
RACK1-222	ENST00000509535	PNPLA6	Q8IY17	1366 aa		13.54	□□□□□ -0.24
RACK1-222	ENST00000509535	ABCC5	O15440	1437 aa		13.54	□□□□□ -0.24
RACK1-222	ENST00000509535	DCC	P43146	1447 aa		13.54	□□□□□ -0.24
RACK1-222	ENST00000509535	TRPM2	O94759	1503 aa		13.54	□□□□□ -0.24
RACK1-222	ENST00000509535	PIK3R4	Q99570	1358 aa		13.53	□□□□□ -0.24
RACK1-222	ENST00000509535	PTPN23	Q9H3S7	1636 aa		13.53	□□□□□ -0.24
RACK1-222	ENST00000509535	MST1R	Q04912	1400 aa		13.52	□□□□□ -0.25
RACK1-222	ENST00000509535	RPRD2	Q5VT52	1461 aa	Known RBP	13.52	□□□□□ -0.25
RACK1-222	ENST00000509535	XRN1	Q8IZH2	1706 aa	Known RBP	13.52	□□□□□ -0.25
RACK1-222	ENST00000509535	ADAMTS2	O95450	1211 aa		13.51	□□□□□ -0.25
RACK1-222	ENST00000509535	LRP5	O75197	1615 aa		13.5	□□□□□ -0.25
RACK1-222	ENST00000509535	DAPK1	P53355	1430 aa		13.5	□□□□□ -0.25
RACK1-222	ENST00000509535	PTPRU	Q92729	1446 aa		13.5	□□□□□ -0.25
RACK1-222	ENST00000509535	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
RACK1-222	ENST00000509535	DDX17	Q92841	729 aa	Known RBP	13.5	□□□□□ -0.25
RACK1-222	ENST00000509535	NALCN	Q8IZF0	1738 aa		13.5	□□□□□ -0.25
RACK1-222	ENST00000509535	MARF1	Q9Y4F3	1742 aa	Known RBP	13.5	□□□□□ -0.25
RACK1-222	ENST00000509535	UNC13B	O14795	1591 aa		13.49	□□□□□ -0.25
RACK1-222	ENST00000509535	AMOTL2	Q9Y2J4	779 aa		13.49	□□□□□ -0.25
RACK1-222	ENST00000509535	CCDC125	Q86Z20	511 aa		13.48	□□□□□ -0.25
RACK1-222	ENST00000509535	USP21	Q9UK80	565 aa		13.48	□□□□□ -0.25
RACK1-222	ENST00000509535	ANKRD30A	Q9BXX3	1397 aa		13.47	□□□□□ -0.25
RACK1-222	ENST00000509535	LAMC1	P11047	1609 aa		13.47	□□□□□ -0.25
RACK1-222	ENST00000509535	CHGA	P10645	457 aa	Known RBP	13.47	□□□□□ -0.25
RACK1-222	ENST00000509535	KANK4	Q5T7N3	995 aa	Predicted RBP	13.47	□□□□□ -0.25
RACK1-222	ENST00000509535	TRPC5	Q9UL62	973 aa	Predicted RBP	13.47	□□□□□ -0.25
RACK1-222	ENST00000509535	BRWD3	Q6RI45	1802 aa		13.47	□□□□□ -0.25
RACK1-222	ENST00000509535	NRXN3	Q9Y4C0	1643 aa		13.46	□□□□□ -0.25
RACK1-222	ENST00000509535	CHIC2	Q9UKJ5	165 aa		13.46	□□□□□ -0.25
RACK1-222	ENST00000509535		E9PCH4	1651 aa		13.46	□□□□□ -0.26
RACK1-222	ENST00000509535	ATRN	O75882	1429 aa		13.46	□□□□□ -0.26
RACK1-222	ENST00000509535	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.43	□□□□□ -0.26
RACK1-222	ENST00000509535	PTCH1	Q13635	1447 aa		13.43	□□□□□ -0.26
RACK1-222	ENST00000509535	VPS8	Q8N3P4	1428 aa		13.43	□□□□□ -0.26
RACK1-222	ENST00000509535	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.43	□□□□□ -0.26
RACK1-222	ENST00000509535	ADGRL3	Q9HAR2	1447 aa		13.43	□□□□□ -0.26
RACK1-222	ENST00000509535	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.42	□□□□□ -0.26
RACK1-222	ENST00000509535	BLM	P54132	1417 aa	Predicted RBP	13.4	□□□□□ -0.26
RACK1-222	ENST00000509535	IQGAP3	Q86VI3	1631 aa		13.4	□□□□□ -0.26
RACK1-222	ENST00000509535	SPHKAP	Q2M3C7	1700 aa		13.39	□□□□□ -0.27
RACK1-222	ENST00000509535	C1orf167	Q5SNV9	1468 aa		13.39	□□□□□ -0.27
RACK1-222	ENST00000509535	BCL9L	Q86UU0	1499 aa		13.39	□□□□□ -0.27
RACK1-222	ENST00000509535	ADGRL2	O95490	1459 aa		13.38	□□□□□ -0.27
RACK1-222	ENST00000509535	ANKRD50	Q9ULJ7	1429 aa		13.38	□□□□□ -0.27
RACK1-222	ENST00000509535	SOS2	Q07890	1332 aa	Predicted RBP	13.38	□□□□□ -0.27
RACK1-222	ENST00000509535	DEFB132	Q7Z7B7	95 aa		13.37	□□□□□ -0.27
RACK1-222	ENST00000509535	GJD4	Q96KN9	370 aa	Predicted RBP	13.36	□□□□□ -0.27
RACK1-222	ENST00000509535	GLI3	P10071	1580 aa		13.36	□□□□□ -0.27
RACK1-222	ENST00000509535	MYOM2	P54296	1465 aa		13.36	□□□□□ -0.27
RACK1-222	ENST00000509535	MET	P08581	1390 aa		13.35	□□□□□ -0.27
RACK1-222	ENST00000509535	ORAI2	Q96SN7	254 aa		13.34	□□□□□ -0.27
RACK1-222	ENST00000509535	SF3B2	Q13435	895 aa	Known RBP	13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms