RNA–Protein interactions for RNA: ENST00000507261.1

RACK1-215, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-215ENST00000507261 IFT172Q9UG01 1749 aa12.23□□□□□ -0.45
RACK1-215ENST00000507261 ZNF142P52746 1687 aaPredicted RBP12.22□□□□□ -0.45
RACK1-215ENST00000507261 ZFYVE9O95405 1425 aa12.22□□□□□ -0.45
RACK1-215ENST00000507261 UHRF1BP1Q6BDS2 1440 aa12.22□□□□□ -0.45
RACK1-215ENST00000507261 TMEM2Q9UHN6 1383 aa12.22□□□□□ -0.45
RACK1-215ENST00000507261 MYOM2P54296 1465 aa12.21□□□□□ -0.45
RACK1-215ENST00000507261 RIMS2Q9UQ26 1411 aa12.21□□□□□ -0.45
RACK1-215ENST00000507261 PPLO60437 1756 aa12.21□□□□□ -0.45
RACK1-215ENST00000507261 ADGRF5Q8IZF2 1346 aa12.21□□□□□ -0.45
RACK1-215ENST00000507261 NBPF8Q3BBV2 869 aa12.21□□□□□ -0.45
RACK1-215ENST00000507261 SETD1BQ9UPS6 1966 aaKnown RBP12.21□□□□□ -0.46
RACK1-215ENST00000507261 ARHGAP23Q9P227 1491 aa12.21□□□□□ -0.46
RACK1-215ENST00000507261 PRAG1Q86YV5 1406 aa12.2□□□□□ -0.46
RACK1-215ENST00000507261 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
RACK1-215ENST00000507261 NUTM2DQ5VT03 806 aaPredicted RBP12.2□□□□□ -0.46
RACK1-215ENST00000507261 SLIT1O75093 1534 aa12.2□□□□□ -0.46
RACK1-215ENST00000507261 NRXN1Q9ULB1 1477 aa12.2□□□□□ -0.46
RACK1-215ENST00000507261 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.19□□□□□ -0.46
RACK1-215ENST00000507261 LTKP29376 864 aa12.18□□□□□ -0.46
RACK1-215ENST00000507261 HDGFP51858 240 aaKnown RBP12.18□□□□□ -0.46
RACK1-215ENST00000507261 TXNDC2Q86VQ3 553 aa12.17□□□□□ -0.46
RACK1-215ENST00000507261 LMTK3Q96Q04 1460 aa12.16□□□□□ -0.46
RACK1-215ENST00000507261 EID1Q9Y6B2 187 aa12.16□□□□□ -0.46
RACK1-215ENST00000507261 PIK3C2GO75747 1445 aa12.16□□□□□ -0.46
RACK1-215ENST00000507261 CFAP70Q5T0N1 1121 aa12.14□□□□□ -0.47
RACK1-215ENST00000507261 ANKLE2Q86XL3 938 aa12.14□□□□□ -0.47
RACK1-215ENST00000507261 C14orf93Q9H972 538 aaKnown RBP12.14□□□□□ -0.47
RACK1-215ENST00000507261 TRPM1Q7Z4N2 1603 aa12.14□□□□□ -0.47
RACK1-215ENST00000507261 PLEKHG1Q9ULL1 1385 aa12.14□□□□□ -0.47
RACK1-215ENST00000507261 RALGAPBQ86X10 1494 aa12.14□□□□□ -0.47
RACK1-215ENST00000507261 SCAF11Q99590 1463 aaKnown RBP12.14□□□□□ -0.47
RACK1-215ENST00000507261 NBPF1Q3BBV0 1214 aa12.13□□□□□ -0.47
RACK1-215ENST00000507261 SETBP1Q9Y6X0 1596 aa12.12□□□□□ -0.47
RACK1-215ENST00000507261 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
RACK1-215ENST00000507261 KIAA1210Q9ULL0 1709 aa12.11□□□□□ -0.47
RACK1-215ENST00000507261 HSPA2P54652 639 aa12.11□□□□□ -0.47
RACK1-215ENST00000507261 SENP3Q9H4L4 574 aaPredicted RBP12.11□□□□□ -0.47
RACK1-215ENST00000507261 ALKQ9UM73 1620 aa12.11□□□□□ -0.47
RACK1-215ENST00000507261 NRXN3Q9Y4C0 1643 aa12.11□□□□□ -0.47
RACK1-215ENST00000507261 MED14O60244 1454 aa12.1□□□□□ -0.47
RACK1-215ENST00000507261 ROCK2O75116 1388 aaKnown RBP12.1□□□□□ -0.47
RACK1-215ENST00000507261 GPRASP1Q5JY77 1395 aa12.1□□□□□ -0.47
RACK1-215ENST00000507261 ADAMTS13Q76LX8 1427 aa12.1□□□□□ -0.47
RACK1-215ENST00000507261 ADGRB1O14514 1584 aa12.09□□□□□ -0.47
RACK1-215ENST00000507261 LAMC1P11047 1609 aa12.08□□□□□ -0.48
RACK1-215ENST00000507261 IQGAP1P46940 1657 aa12.08□□□□□ -0.48
RACK1-215ENST00000507261 TMEM132EQ6IEE7 984 aa12.08□□□□□ -0.48
RACK1-215ENST00000507261 BCANQ96GW7 911 aa12.08□□□□□ -0.48
RACK1-215ENST00000507261 CARD11Q9BXL7 1154 aa12.08□□□□□ -0.48
RACK1-215ENST00000507261 ASXL1Q8IXJ9 1541 aa12.07□□□□□ -0.48
RACK1-215ENST00000507261 SETD1AO15047 1707 aaKnown RBP12.07□□□□□ -0.48
RACK1-215ENST00000507261 NPHP4O75161 1426 aaPredicted RBP12.07□□□□□ -0.48
RACK1-215ENST00000507261 SLC26A8Q96RN1 970 aa12.07□□□□□ -0.48
RACK1-215ENST00000507261 TBX22Q9Y458 520 aa12.07□□□□□ -0.48
RACK1-215ENST00000507261 METP08581 1390 aa12.06□□□□□ -0.48
RACK1-215ENST00000507261 POLR1AO95602 1720 aaPredicted RBP12.06□□□□□ -0.48
RACK1-215ENST00000507261 DIP2AQ14689 1571 aa12.05□□□□□ -0.48
RACK1-215ENST00000507261 STRCQ7RTU9 1775 aa12.05□□□□□ -0.48
RACK1-215ENST00000507261 USP47Q96K76 1375 aa12.04□□□□□ -0.48
RACK1-215ENST00000507261 YTHDC2Q9H6S0 1430 aaKnown RBP12.03□□□□□ -0.48
RACK1-215ENST00000507261 HSPA5P11021 654 aaKnown RBP12.03□□□□□ -0.48
RACK1-215ENST00000507261 EIF4G2P78344 907 aaKnown RBP eCLIP12.03□□□□□ -0.48
RACK1-215ENST00000507261 LRPPRCP42704 1394 aaKnown RBP12.03□□□□□ -0.48
RACK1-215ENST00000507261 PTPRUQ92729 1446 aa12.03□□□□□ -0.48
RACK1-215ENST00000507261 STK26Q9P289 416 aa12.02□□□□□ -0.49
RACK1-215ENST00000507261 TRAK1Q9UPV9 953 aa12.02□□□□□ -0.49
RACK1-215ENST00000507261 ABCC11Q96J66 1382 aa12.02□□□□□ -0.49
RACK1-215ENST00000507261 PIK3R4Q99570 1358 aa12.02□□□□□ -0.49
RACK1-215ENST00000507261 ST20-MTHFSA0A0A6YYL1 179 aa12□□□□□ -0.49
RACK1-215ENST00000507261 HIRIP3Q9BW71 556 aaPredicted RBP12□□□□□ -0.49
RACK1-215ENST00000507261 SIRT1Q96EB6 747 aa11.99□□□□□ -0.49
RACK1-215ENST00000507261 AMOTL2Q9Y2J4 779 aa11.99□□□□□ -0.49
RACK1-215ENST00000507261 TECPR2O15040 1411 aa11.99□□□□□ -0.49
RACK1-215ENST00000507261 DLC1Q96QB1 1528 aa11.98□□□□□ -0.49
RACK1-215ENST00000507261 EIF3AQ14152 1382 aaKnown RBP11.98□□□□□ -0.49
RACK1-215ENST00000507261 ROBO2Q9HCK4 1378 aa11.97□□□□□ -0.49
RACK1-215ENST00000507261 KCNA6P17658 529 aa11.97□□□□□ -0.49
RACK1-215ENST00000507261 FBXO41Q8TF61 875 aa11.97□□□□□ -0.49
RACK1-215ENST00000507261 TESK2Q96S53 571 aa11.97□□□□□ -0.49
RACK1-215ENST00000507261 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
RACK1-215ENST00000507261 KNDC1Q76NI1 1749 aa11.97□□□□□ -0.49
RACK1-215ENST00000507261 XRN1Q8IZH2 1706 aaKnown RBP11.97□□□□□ -0.49
RACK1-215ENST00000507261 ARHGEF28Q8N1W1 1705 aaKnown RBP11.97□□□□□ -0.49
RACK1-215ENST00000507261 CPS1P31327 1500 aa11.96□□□□□ -0.49
RACK1-215ENST00000507261 FAM135BQ49AJ0 1406 aa11.96□□□□□ -0.49
RACK1-215ENST00000507261 CENPJQ9HC77 1338 aaPredicted RBP11.96□□□□□ -0.49
RACK1-215ENST00000507261 CHD2O14647 1828 aaKnown RBP11.96□□□□□ -0.49
RACK1-215ENST00000507261 ZNF316A6NFI3 1004 aaPredicted RBP11.96□□□□□ -0.49
RACK1-215ENST00000507261 WAPLQ7Z5K2 1190 aa11.96□□□□□ -0.49
RACK1-215ENST00000507261 PRAM1Q96QH2 718 aa11.96□□□□□ -0.49
RACK1-215ENST00000507261 PLEKHH1Q9ULM0 1364 aa11.95□□□□□ -0.5
RACK1-215ENST00000507261 POGKQ9P215 609 aa11.95□□□□□ -0.5
RACK1-215ENST00000507261 NWD1Q149M9 1564 aa11.95□□□□□ -0.5
RACK1-215ENST00000507261 PTCH1Q13635 1447 aa11.94□□□□□ -0.5
RACK1-215ENST00000507261 C11orf95C9JLR9 678 aaPredicted RBP11.94□□□□□ -0.5
RACK1-215ENST00000507261 SAFB2Q14151 953 aaKnown RBP eCLIP11.93□□□□□ -0.5
RACK1-215ENST00000507261 SBNO2Q9Y2G9 1366 aa11.92□□□□□ -0.5
RACK1-215ENST00000507261 QRICH2Q9H0J4 1663 aa11.92□□□□□ -0.5
RACK1-215ENST00000507261 ZNF335Q9H4Z2 1342 aaPredicted RBP11.91□□□□□ -0.5
RACK1-215ENST00000507261 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms