RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 NUTM2DQ5VT03 806 aaPredicted RBP29.27■■■□□ 2.28
CDC42SE2-206ENST00000503291 TMEM2Q9UHN6 1383 aa29.27■■■□□ 2.28
CDC42SE2-206ENST00000503291 NEXMIFQ5QGS0 1516 aa29.26■■■□□ 2.28
CDC42SE2-206ENST00000503291 RIMS2Q9UQ26 1411 aa29.25■■■□□ 2.27
CDC42SE2-206ENST00000503291 IFT172Q9UG01 1749 aa29.25■■■□□ 2.27
CDC42SE2-206ENST00000503291 PPLO60437 1756 aa29.25■■■□□ 2.27
CDC42SE2-206ENST00000503291 VGFO15240 615 aaPredicted RBP29.23■■■□□ 2.27
CDC42SE2-206ENST00000503291 HDGFP51858 240 aaKnown RBP29.23■■■□□ 2.27
CDC42SE2-206ENST00000503291 ZFYVE9O95405 1425 aa29.22■■■□□ 2.27
CDC42SE2-206ENST00000503291 ADGRF5Q8IZF2 1346 aa29.22■■■□□ 2.27
CDC42SE2-206ENST00000503291 NBPF8Q3BBV2 869 aa29.21■■■□□ 2.27
CDC42SE2-206ENST00000503291 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.2■■■□□ 2.27
CDC42SE2-206ENST00000503291 SLIT1O75093 1534 aa29.2■■■□□ 2.27
CDC42SE2-206ENST00000503291 MYOM2P54296 1465 aa29.2■■■□□ 2.26
CDC42SE2-206ENST00000503291 ARHGAP23Q9P227 1491 aa29.19■■■□□ 2.26
CDC42SE2-206ENST00000503291 TXNDC2Q86VQ3 553 aa29.18■■■□□ 2.26
CDC42SE2-206ENST00000503291 LTKP29376 864 aa29.18■■■□□ 2.26
CDC42SE2-206ENST00000503291 EID1Q9Y6B2 187 aa29.18■■■□□ 2.26
CDC42SE2-206ENST00000503291 PRAG1Q86YV5 1406 aa29.17■■■□□ 2.26
CDC42SE2-206ENST00000503291 LMTK3Q96Q04 1460 aa29.15■■■□□ 2.26
CDC42SE2-206ENST00000503291 NRXN1Q9ULB1 1477 aa29.14■■■□□ 2.26
CDC42SE2-206ENST00000503291 SENP3Q9H4L4 574 aaPredicted RBP29.13■■■□□ 2.25
CDC42SE2-206ENST00000503291 ANKLE2Q86XL3 938 aa29.12■■■□□ 2.25
CDC42SE2-206ENST00000503291 HSPA2P54652 639 aa29.11■■■□□ 2.25
CDC42SE2-206ENST00000503291 PIK3C2GO75747 1445 aa29.1■■■□□ 2.25
CDC42SE2-206ENST00000503291 SCAF11Q99590 1463 aaKnown RBP29.09■■■□□ 2.25
CDC42SE2-206ENST00000503291 CFAP70Q5T0N1 1121 aa29.07■■■□□ 2.24
CDC42SE2-206ENST00000503291 C14orf93Q9H972 538 aaKnown RBP29.06■■■□□ 2.24
CDC42SE2-206ENST00000503291 PLEKHG1Q9ULL1 1385 aa29.05■■■□□ 2.24
CDC42SE2-206ENST00000503291 BCANQ96GW7 911 aa29.05■■■□□ 2.24
CDC42SE2-206ENST00000503291 NBPF1Q3BBV0 1214 aa29.03■■■□□ 2.24
CDC42SE2-206ENST00000503291 NCKAP5LQ9HCH0 1330 aa29.03■■■□□ 2.24
CDC42SE2-206ENST00000503291 TRPM1Q7Z4N2 1603 aa29.02■■■□□ 2.24
CDC42SE2-206ENST00000503291 RALGAPBQ86X10 1494 aa29.01■■■□□ 2.23
CDC42SE2-206ENST00000503291 SETBP1Q9Y6X0 1596 aa28.99■■■□□ 2.23
CDC42SE2-206ENST00000503291 ROCK2O75116 1388 aaKnown RBP28.99■■■□□ 2.23
CDC42SE2-206ENST00000503291 KIAA1210Q9ULL0 1709 aa28.98■■■□□ 2.23
CDC42SE2-206ENST00000503291 ALKQ9UM73 1620 aa28.98■■■□□ 2.23
CDC42SE2-206ENST00000503291 NRXN3Q9Y4C0 1643 aa28.98■■■□□ 2.23
CDC42SE2-206ENST00000503291 AEBP2Q6ZN18 517 aaPredicted RBP28.98■■■□□ 2.23
CDC42SE2-206ENST00000503291 POLR1AO95602 1720 aaPredicted RBP28.97■■■□□ 2.23
CDC42SE2-206ENST00000503291 SLC26A8Q96RN1 970 aa28.96■■■□□ 2.23
CDC42SE2-206ENST00000503291 IQGAP1P46940 1657 aa28.96■■■□□ 2.23
CDC42SE2-206ENST00000503291 ADAMTS13Q76LX8 1427 aa28.96■■■□□ 2.23
CDC42SE2-206ENST00000503291 MED14O60244 1454 aa28.95■■■□□ 2.23
CDC42SE2-206ENST00000503291 TMEM132EQ6IEE7 984 aa28.95■■■□□ 2.23
CDC42SE2-206ENST00000503291 CARD11Q9BXL7 1154 aa28.95■■■□□ 2.23
CDC42SE2-206ENST00000503291 LAMC1P11047 1609 aa28.94■■■□□ 2.22
CDC42SE2-206ENST00000503291 NPHP4O75161 1426 aaPredicted RBP28.94■■■□□ 2.22
CDC42SE2-206ENST00000503291 GPRASP1Q5JY77 1395 aa28.93■■■□□ 2.22
CDC42SE2-206ENST00000503291 TBX22Q9Y458 520 aa28.92■■■□□ 2.22
CDC42SE2-206ENST00000503291 ADGRB1O14514 1584 aa28.89■■■□□ 2.22
CDC42SE2-206ENST00000503291 SETD1AO15047 1707 aaKnown RBP28.89■■■□□ 2.22
CDC42SE2-206ENST00000503291 METP08581 1390 aa28.89■■■□□ 2.22
CDC42SE2-206ENST00000503291 STRCQ7RTU9 1775 aa28.89■■■□□ 2.21
CDC42SE2-206ENST00000503291 ASXL1Q8IXJ9 1541 aa28.87■■■□□ 2.21
CDC42SE2-206ENST00000503291 DIP2AQ14689 1571 aa28.84■■■□□ 2.21
CDC42SE2-206ENST00000503291 STK26Q9P289 416 aa28.82■■■□□ 2.2
CDC42SE2-206ENST00000503291 EIF4G2P78344 907 aaKnown RBP eCLIP28.81■■■□□ 2.2
CDC42SE2-206ENST00000503291 TRAK1Q9UPV9 953 aa28.81■■■□□ 2.2
CDC42SE2-206ENST00000503291 YTHDC2Q9H6S0 1430 aaKnown RBP28.81■■■□□ 2.2
CDC42SE2-206ENST00000503291 USP47Q96K76 1375 aa28.81■■■□□ 2.2
CDC42SE2-206ENST00000503291 LRPPRCP42704 1394 aaKnown RBP28.78■■■□□ 2.2
CDC42SE2-206ENST00000503291 PIK3R4Q99570 1358 aa28.77■■■□□ 2.2
CDC42SE2-206ENST00000503291 HSPA5P11021 654 aaKnown RBP28.77■■■□□ 2.2
CDC42SE2-206ENST00000503291 PTPRUQ92729 1446 aa28.76■■■□□ 2.19
CDC42SE2-206ENST00000503291 HIRIP3Q9BW71 556 aaPredicted RBP28.76■■■□□ 2.19
CDC42SE2-206ENST00000503291 ABCC11Q96J66 1382 aa28.75■■■□□ 2.19
CDC42SE2-206ENST00000503291 AMOTL2Q9Y2J4 779 aa28.75■■■□□ 2.19
CDC42SE2-206ENST00000503291 DMRT2Q9Y5R5 561 aa28.75■■■□□ 2.19
CDC42SE2-206ENST00000503291 ST20-MTHFSA0A0A6YYL1 179 aa28.74■■■□□ 2.19
CDC42SE2-206ENST00000503291 EIF3AQ14152 1382 aaKnown RBP28.71■■■□□ 2.19
CDC42SE2-206ENST00000503291 CHD2O14647 1828 aaKnown RBP28.69■■■□□ 2.18
CDC42SE2-206ENST00000503291 TECPR2O15040 1411 aa28.69■■■□□ 2.18
CDC42SE2-206ENST00000503291 KCNA6P17658 529 aa28.68■■■□□ 2.18
CDC42SE2-206ENST00000503291 PRAM1Q96QH2 718 aa28.67■■■□□ 2.18
CDC42SE2-206ENST00000503291 ARHGEF28Q8N1W1 1705 aaKnown RBP28.67■■■□□ 2.18
CDC42SE2-206ENST00000503291 SIRT1Q96EB6 747 aa28.67■■■□□ 2.18
CDC42SE2-206ENST00000503291 DLC1Q96QB1 1528 aa28.66■■■□□ 2.18
CDC42SE2-206ENST00000503291 WAPLQ7Z5K2 1190 aa28.66■■■□□ 2.18
CDC42SE2-206ENST00000503291 POGKQ9P215 609 aa28.65■■■□□ 2.18
CDC42SE2-206ENST00000503291 KNDC1Q76NI1 1749 aa28.65■■■□□ 2.18
CDC42SE2-206ENST00000503291 CENPJQ9HC77 1338 aaPredicted RBP28.65■■■□□ 2.18
CDC42SE2-206ENST00000503291 ROBO2Q9HCK4 1378 aa28.65■■■□□ 2.18
CDC42SE2-206ENST00000503291 XRN1Q8IZH2 1706 aaKnown RBP28.64■■■□□ 2.18
CDC42SE2-206ENST00000503291 CPS1P31327 1500 aa28.63■■■□□ 2.17
CDC42SE2-206ENST00000503291 SAFB2Q14151 953 aaKnown RBP eCLIP28.63■■■□□ 2.17
CDC42SE2-206ENST00000503291 FAM135BQ49AJ0 1406 aa28.62■■■□□ 2.17
CDC42SE2-206ENST00000503291 TESK2Q96S53 571 aa28.62■■■□□ 2.17
CDC42SE2-206ENST00000503291 PLEKHH1Q9ULM0 1364 aa28.61■■■□□ 2.17
CDC42SE2-206ENST00000503291 PTCH1Q13635 1447 aa28.61■■■□□ 2.17
CDC42SE2-206ENST00000503291 NWD1Q149M9 1564 aa28.59■■■□□ 2.17
CDC42SE2-206ENST00000503291 ZNF335Q9H4Z2 1342 aaPredicted RBP28.57■■■□□ 2.16
CDC42SE2-206ENST00000503291 ZNF316A6NFI3 1004 aaPredicted RBP28.57■■■□□ 2.16
CDC42SE2-206ENST00000503291 QRICH2Q9H0J4 1663 aa28.55■■■□□ 2.16
CDC42SE2-206ENST00000503291 STRCP1A6NGW2 1772 aa28.55■■■□□ 2.16
CDC42SE2-206ENST00000503291 SBNO2Q9Y2G9 1366 aa28.54■■■□□ 2.16
CDC42SE2-206ENST00000503291 MINK1Q8N4C8 1332 aaPredicted RBP28.54■■■□□ 2.16
CDC42SE2-206ENST00000503291 PROSER2Q86WR7 435 aaPredicted RBP28.53■■■□□ 2.16
CDC42SE2-206ENST00000503291 RBM33Q96EV2 1170 aaKnown RBP28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms