RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 TMEM131LA2VDJ0 1609 aa12.82□□□□□ -0.36
NR1I3-216ENST00000502848 NLRP1Q9C000 1473 aa12.82□□□□□ -0.36
NR1I3-216ENST00000502848 PPLO60437 1756 aa12.81□□□□□ -0.36
NR1I3-216ENST00000502848 NEXMIFQ5QGS0 1516 aa12.8□□□□□ -0.36
NR1I3-216ENST00000502848 RGL3Q3MIN7 710 aa12.8□□□□□ -0.36
NR1I3-216ENST00000502848 SETBP1Q9Y6X0 1596 aa12.8□□□□□ -0.36
NR1I3-216ENST00000502848 ROCK2O75116 1388 aaKnown RBP12.8□□□□□ -0.36
NR1I3-216ENST00000502848 FER1L4A9Z1Z3 1794 aa12.79□□□□□ -0.36
NR1I3-216ENST00000502848 TNRQ92752 1358 aa12.79□□□□□ -0.36
NR1I3-216ENST00000502848 USP47Q96K76 1375 aa12.79□□□□□ -0.36
NR1I3-216ENST00000502848 PIK3C2GO75747 1445 aa12.79□□□□□ -0.36
NR1I3-216ENST00000502848 IDI1Q13907 227 aa12.78□□□□□ -0.36
NR1I3-216ENST00000502848 VGFO15240 615 aaPredicted RBP12.77□□□□□ -0.37
NR1I3-216ENST00000502848 CARD11Q9BXL7 1154 aa12.77□□□□□ -0.37
NR1I3-216ENST00000502848 ADAMTSL3P82987 1691 aa12.77□□□□□ -0.37
NR1I3-216ENST00000502848 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
NR1I3-216ENST00000502848 HSPA5P11021 654 aaKnown RBP12.76□□□□□ -0.37
NR1I3-216ENST00000502848 MLECQ14165 292 aa12.76□□□□□ -0.37
NR1I3-216ENST00000502848 KDM2AQ9Y2K7 1162 aa12.76□□□□□ -0.37
NR1I3-216ENST00000502848 A2ML1A8K2U0 1454 aa12.76□□□□□ -0.37
NR1I3-216ENST00000502848 POLR1AO95602 1720 aaPredicted RBP12.75□□□□□ -0.37
NR1I3-216ENST00000502848 C3P01024 1663 aa12.75□□□□□ -0.37
NR1I3-216ENST00000502848 DIEXFQ68CQ4 756 aaKnown RBP12.75□□□□□ -0.37
NR1I3-216ENST00000502848 SCAF11Q99590 1463 aaKnown RBP12.75□□□□□ -0.37
NR1I3-216ENST00000502848 IQGAP1P46940 1657 aa12.74□□□□□ -0.37
NR1I3-216ENST00000502848 EIF3AQ14152 1382 aaKnown RBP12.74□□□□□ -0.37
NR1I3-216ENST00000502848 ZNF326Q5BKZ1 582 aaKnown RBP12.74□□□□□ -0.37
NR1I3-216ENST00000502848 FBXO31Q5XUX0 539 aaPredicted RBP12.74□□□□□ -0.37
NR1I3-216ENST00000502848 NPM3O75607 178 aaKnown RBP12.73□□□□□ -0.37
NR1I3-216ENST00000502848 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.73□□□□□ -0.37
NR1I3-216ENST00000502848 HDGFP51858 240 aaKnown RBP12.72□□□□□ -0.37
NR1I3-216ENST00000502848 SBNO2Q9Y2G9 1366 aa12.71□□□□□ -0.37
NR1I3-216ENST00000502848 ADGRF5Q8IZF2 1346 aa12.71□□□□□ -0.37
NR1I3-216ENST00000502848 C14orf93Q9H972 538 aaKnown RBP12.71□□□□□ -0.37
NR1I3-216ENST00000502848 ADGRB1O14514 1584 aa12.71□□□□□ -0.37
NR1I3-216ENST00000502848 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.38
NR1I3-216ENST00000502848 CFAP65Q6ZU64 1925 aaKnown RBP12.7□□□□□ -0.38
NR1I3-216ENST00000502848 MYO3AQ8NEV4 1616 aa12.7□□□□□ -0.38
NR1I3-216ENST00000502848 CHGAP10645 457 aaKnown RBP12.7□□□□□ -0.38
NR1I3-216ENST00000502848 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
NR1I3-216ENST00000502848 SLIT1O75093 1534 aa12.69□□□□□ -0.38
NR1I3-216ENST00000502848 RIMS2Q9UQ26 1411 aa12.69□□□□□ -0.38
NR1I3-216ENST00000502848 ZNF142P52746 1687 aaPredicted RBP12.68□□□□□ -0.38
NR1I3-216ENST00000502848 ARHGAP23Q9P227 1491 aa12.68□□□□□ -0.38
NR1I3-216ENST00000502848 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
NR1I3-216ENST00000502848 TMEM2Q9UHN6 1383 aa12.68□□□□□ -0.38
NR1I3-216ENST00000502848 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
NR1I3-216ENST00000502848 MYO5BQ9ULV0 1848 aa12.67□□□□□ -0.38
NR1I3-216ENST00000502848 NBPF1Q3BBV0 1214 aa12.67□□□□□ -0.38
NR1I3-216ENST00000502848 WASHC2AQ641Q2 1341 aa12.66□□□□□ -0.38
NR1I3-216ENST00000502848 RNF216Q9NWF9 866 aaPredicted RBP12.65□□□□□ -0.38
NR1I3-216ENST00000502848 CEP170BQ9Y4F5 1589 aaPredicted RBP12.64□□□□□ -0.39
NR1I3-216ENST00000502848 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
NR1I3-216ENST00000502848 CDCA8Q53HL2 280 aa12.64□□□□□ -0.39
NR1I3-216ENST00000502848 CFAP70Q5T0N1 1121 aa12.64□□□□□ -0.39
NR1I3-216ENST00000502848 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
NR1I3-216ENST00000502848 DIP2AQ14689 1571 aa12.64□□□□□ -0.39
NR1I3-216ENST00000502848 KIF7Q2M1P5 1343 aa12.63□□□□□ -0.39
NR1I3-216ENST00000502848 DLC1Q96QB1 1528 aa12.63□□□□□ -0.39
NR1I3-216ENST00000502848 ALKQ9UM73 1620 aa12.63□□□□□ -0.39
NR1I3-216ENST00000502848 THEMISQ8N1K5 641 aaPredicted RBP12.63□□□□□ -0.39
NR1I3-216ENST00000502848 TESK2Q96S53 571 aa12.63□□□□□ -0.39
NR1I3-216ENST00000502848 ASXL1Q8IXJ9 1541 aa12.62□□□□□ -0.39
NR1I3-216ENST00000502848 PTPRMP28827 1452 aa12.61□□□□□ -0.39
NR1I3-216ENST00000502848 TMF1P82094 1093 aa12.61□□□□□ -0.39
NR1I3-216ENST00000502848 PUS7Q96PZ0 661 aaKnown RBP12.61□□□□□ -0.39
NR1I3-216ENST00000502848 SETD1AO15047 1707 aaKnown RBP12.61□□□□□ -0.39
NR1I3-216ENST00000502848 NRXN3Q9Y4C0 1643 aa12.61□□□□□ -0.39
NR1I3-216ENST00000502848 TECPR2O15040 1411 aa12.6□□□□□ -0.39
NR1I3-216ENST00000502848 SETD1BQ9UPS6 1966 aaKnown RBP12.6□□□□□ -0.39
NR1I3-216ENST00000502848 CEBPAP49715 358 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-216ENST00000502848 HIRIP3Q9BW71 556 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-216ENST00000502848 EID1Q9Y6B2 187 aa12.59□□□□□ -0.39
NR1I3-216ENST00000502848 YTHDC2Q9H6S0 1430 aaKnown RBP12.59□□□□□ -0.39
NR1I3-216ENST00000502848 ARHGEF28Q8N1W1 1705 aaKnown RBP12.59□□□□□ -0.39
NR1I3-216ENST00000502848 CENPJQ9HC77 1338 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-216ENST00000502848 MED14O60244 1454 aa12.59□□□□□ -0.39
NR1I3-216ENST00000502848 LRPPRCP42704 1394 aaKnown RBP12.58□□□□□ -0.4
NR1I3-216ENST00000502848 ABCC11Q96J66 1382 aa12.58□□□□□ -0.4
NR1I3-216ENST00000502848 DDX10Q13206 875 aaKnown RBP12.58□□□□□ -0.4
NR1I3-216ENST00000502848 KNDC1Q76NI1 1749 aa12.58□□□□□ -0.4
NR1I3-216ENST00000502848 SIRT1Q96EB6 747 aa12.58□□□□□ -0.4
NR1I3-216ENST00000502848 FAM135BQ49AJ0 1406 aa12.57□□□□□ -0.4
NR1I3-216ENST00000502848 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
NR1I3-216ENST00000502848 HOXD11P31277 338 aaPredicted RBP12.57□□□□□ -0.4
NR1I3-216ENST00000502848 PIK3R4Q99570 1358 aa12.56□□□□□ -0.4
NR1I3-216ENST00000502848 CPS1P31327 1500 aa12.56□□□□□ -0.4
NR1I3-216ENST00000502848 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
NR1I3-216ENST00000502848 ADAMTS13Q76LX8 1427 aa12.55□□□□□ -0.4
NR1I3-216ENST00000502848 QRICH2Q9H0J4 1663 aa12.55□□□□□ -0.4
NR1I3-216ENST00000502848 DISP3Q9P2K9 1392 aa12.55□□□□□ -0.4
NR1I3-216ENST00000502848 NINLQ9Y2I6 1382 aa12.54□□□□□ -0.4
NR1I3-216ENST00000502848 TBX22Q9Y458 520 aa12.53□□□□□ -0.4
NR1I3-216ENST00000502848 CCER2I3L3R5 266 aa12.52□□□□□ -0.41
NR1I3-216ENST00000502848 ANP32CO43423 234 aa12.52□□□□□ -0.41
NR1I3-216ENST00000502848 TXNDC2Q86VQ3 553 aa12.52□□□□□ -0.41
NR1I3-216ENST00000502848 PTCH1Q13635 1447 aa12.52□□□□□ -0.41
NR1I3-216ENST00000502848 NUTM2DQ5VT03 806 aaPredicted RBP12.51□□□□□ -0.41
NR1I3-216ENST00000502848 TMEM132EQ6IEE7 984 aa12.51□□□□□ -0.41
NR1I3-216ENST00000502848 TRAK1Q9UPV9 953 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms