RNA–Protein interactions for RNA: ENST00000502575.1

PDE4D-209, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-209ENST00000502575 MAGI2Q86UL8 1455 aa14.19□□□□□ -0.14
PDE4D-209ENST00000502575 CDK11AQ9UQ88 783 aaPredicted RBP14.19□□□□□ -0.14
PDE4D-209ENST00000502575 ARID4BQ4LE39 1312 aaPredicted RBP14.18□□□□□ -0.14
PDE4D-209ENST00000502575 HOXB3P14651 431 aaPredicted RBP14.18□□□□□ -0.14
PDE4D-209ENST00000502575 ZNF710Q8N1W2 664 aa14.18□□□□□ -0.14
PDE4D-209ENST00000502575 ARHGEF12Q9NZN5 1544 aa14.18□□□□□ -0.14
PDE4D-209ENST00000502575 CHGAP10645 457 aaKnown RBP14.17□□□□□ -0.14
PDE4D-209ENST00000502575 ZSWIM6Q9HCJ5 1215 aa14.17□□□□□ -0.14
PDE4D-209ENST00000502575 ZNF518AQ6AHZ1 1483 aa14.17□□□□□ -0.14
PDE4D-209ENST00000502575 TMEM92Q6UXU6 159 aa14.16□□□□□ -0.14
PDE4D-209ENST00000502575 EFCAB2Q5VUJ9 269 aa14.15□□□□□ -0.14
PDE4D-209ENST00000502575 EMP3P54852 163 aa14.14□□□□□ -0.15
PDE4D-209ENST00000502575 CDAN1Q8IWY9 1227 aa14.14□□□□□ -0.15
PDE4D-209ENST00000502575 SUPT6HQ7KZ85 1726 aaKnown RBP14.14□□□□□ -0.15
PDE4D-209ENST00000502575 SYCP2Q9BX26 1530 aa14.14□□□□□ -0.15
PDE4D-209ENST00000502575 CEP162Q5TB80 1403 aa14.14□□□□□ -0.15
PDE4D-209ENST00000502575 ATP10AO60312 1499 aa14.13□□□□□ -0.15
PDE4D-209ENST00000502575 C9orf84Q5VXU9 1444 aa14.13□□□□□ -0.15
PDE4D-209ENST00000502575 TRAPPC8Q9Y2L5 1435 aa14.13□□□□□ -0.15
PDE4D-209ENST00000502575 C3P01024 1663 aa14.13□□□□□ -0.15
PDE4D-209ENST00000502575 PREX1Q8TCU6 1659 aa14.13□□□□□ -0.15
PDE4D-209ENST00000502575 TIAM1Q13009 1591 aa14.13□□□□□ -0.15
PDE4D-209ENST00000502575 REREQ9P2R6 1566 aa14.13□□□□□ -0.15
PDE4D-209ENST00000502575 LMTK3Q96Q04 1460 aa14.12□□□□□ -0.15
PDE4D-209ENST00000502575 HOXB1P14653 301 aaPredicted RBP14.12□□□□□ -0.15
PDE4D-209ENST00000502575 GPATCH8Q9UKJ3 1502 aaKnown RBP14.11□□□□□ -0.15
PDE4D-209ENST00000502575 EHBP1L1Q8N3D4 1523 aa14.1□□□□□ -0.15
PDE4D-209ENST00000502575 INO80Q9ULG1 1556 aaPredicted RBP14.1□□□□□ -0.15
PDE4D-209ENST00000502575 MLECQ14165 292 aa14.1□□□□□ -0.15
PDE4D-209ENST00000502575 AFAP1Q8N556 730 aa14.1□□□□□ -0.15
PDE4D-209ENST00000502575 MARVELD3Q96A59 401 aa14.1□□□□□ -0.15
PDE4D-209ENST00000502575 PLSCR2Q9NRY7 297 aa14.09□□□□□ -0.15
PDE4D-209ENST00000502575 MLH3Q9UHC1 1453 aa14.09□□□□□ -0.15
PDE4D-209ENST00000502575 SETD1BQ9UPS6 1966 aaKnown RBP14.09□□□□□ -0.15
PDE4D-209ENST00000502575 ADGBQ8N7X0 1667 aa14.08□□□□□ -0.16
PDE4D-209ENST00000502575 KIF3CO14782 793 aa14.08□□□□□ -0.16
PDE4D-209ENST00000502575 ATP7AQ04656 1500 aa14.05□□□□□ -0.16
PDE4D-209ENST00000502575 CLTCQ00610 1675 aaKnown RBP14.04□□□□□ -0.16
PDE4D-209ENST00000502575 TMC2Q8TDI7 906 aa14.04□□□□□ -0.16
PDE4D-209ENST00000502575 MTUS2Q5JR59 1369 aa14.04□□□□□ -0.16
PDE4D-209ENST00000502575 MROH2AA6NES4 1674 aa14.04□□□□□ -0.16
PDE4D-209ENST00000502575 STRCQ7RTU9 1775 aa14.04□□□□□ -0.16
PDE4D-209ENST00000502575 ZNF777Q9ULD5 760 aaPredicted RBP14.03□□□□□ -0.16
PDE4D-209ENST00000502575 AGLP35573 1532 aa14.03□□□□□ -0.16
PDE4D-209ENST00000502575 PLXNC1O60486 1568 aa14.03□□□□□ -0.16
PDE4D-209ENST00000502575 C2orf72A6NCS6 295 aa14.02□□□□□ -0.17
PDE4D-209ENST00000502575 MYT1LQ9UL68 1186 aa14.02□□□□□ -0.17
PDE4D-209ENST00000502575 CCNB3Q8WWL7 1395 aa14.01□□□□□ -0.17
PDE4D-209ENST00000502575 LOC105371045A0A1W2PR82 267 aa14.01□□□□□ -0.17
PDE4D-209ENST00000502575 PPP1R37O75864 691 aa14.01□□□□□ -0.17
PDE4D-209ENST00000502575 HS3ST6Q96QI5 342 aa14□□□□□ -0.17
PDE4D-209ENST00000502575 FAM205CA6NFA0 338 aa13.99□□□□□ -0.17
PDE4D-209ENST00000502575 HNRNPMP52272 730 aaKnown RBP eCLIP13.99□□□□□ -0.172e-6■■■□□ 14.7
PDE4D-209ENST00000502575 HSPA2P54652 639 aa13.99□□□□□ -0.17
PDE4D-209ENST00000502575 NCOA2Q15596 1464 aa13.99□□□□□ -0.17
PDE4D-209ENST00000502575 PLEKHH2Q8IVE3 1493 aa13.99□□□□□ -0.17
PDE4D-209ENST00000502575 CEBPAP49715 358 aaPredicted RBP13.98□□□□□ -0.17
PDE4D-209ENST00000502575 ZNF644Q9H582 1327 aaPredicted RBP13.97□□□□□ -0.17
PDE4D-209ENST00000502575 SLC34A2O95436 690 aa13.97□□□□□ -0.17
PDE4D-209ENST00000502575 NKX1-1Q15270 411 aaPredicted RBP13.97□□□□□ -0.17
PDE4D-209ENST00000502575 GPR153Q6NV75 609 aa13.97□□□□□ -0.17
PDE4D-209ENST00000502575 VPS8Q8N3P4 1428 aa13.97□□□□□ -0.17
PDE4D-209ENST00000502575 KIAA1107Q9UPP5 1409 aa13.97□□□□□ -0.17
PDE4D-209ENST00000502575 CAMSAP2Q08AD1 1489 aa13.96□□□□□ -0.17
PDE4D-209ENST00000502575 CFDP1Q9UEE9 299 aaPredicted RBP13.96□□□□□ -0.17
PDE4D-209ENST00000502575 MBD5Q9P267 1494 aa13.95□□□□□ -0.18
PDE4D-209ENST00000502575 SPAG9O60271 1321 aaKnown RBP13.94□□□□□ -0.18
PDE4D-209ENST00000502575 ERBB3P21860 1342 aa13.94□□□□□ -0.18
PDE4D-209ENST00000502575 LRRC9Q6ZRR7 1453 aa13.93□□□□□ -0.18
PDE4D-209ENST00000502575 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
PDE4D-209ENST00000502575 ZNF142P52746 1687 aaPredicted RBP13.93□□□□□ -0.18
PDE4D-209ENST00000502575 MYO3AQ8NEV4 1616 aa13.93□□□□□ -0.18
PDE4D-209ENST00000502575 A2MP01023 1474 aa13.93□□□□□ -0.18
PDE4D-209ENST00000502575 CFAP65Q6ZU64 1925 aaKnown RBP13.92□□□□□ -0.18
PDE4D-209ENST00000502575 CROCC2H7BZ55 1655 aa13.92□□□□□ -0.18
PDE4D-209ENST00000502575 ARHGEF5Q12774 1597 aa13.92□□□□□ -0.18
PDE4D-209ENST00000502575 GPHNQ9NQX3 736 aaPredicted RBP13.91□□□□□ -0.18
PDE4D-209ENST00000502575 CCDC141Q6ZP82 1450 aa13.9□□□□□ -0.18
PDE4D-209ENST00000502575 FOXK1P85037 733 aa13.89□□□□□ -0.19
PDE4D-209ENST00000502575 UHRF1BP1Q6BDS2 1440 aa13.89□□□□□ -0.19
PDE4D-209ENST00000502575 MAP3K1Q13233 1512 aa13.88□□□□□ -0.19
PDE4D-209ENST00000502575 CNTLNQ9NXG0 1405 aa13.88□□□□□ -0.19
PDE4D-209ENST00000502575 CEP152O94986 1710 aa13.87□□□□□ -0.19
PDE4D-209ENST00000502575 POTEB3A0JP26 581 aa13.87□□□□□ -0.19
PDE4D-209ENST00000502575 ARSIQ5FYB1 569 aa13.87□□□□□ -0.19
PDE4D-209ENST00000502575 POTEBQ6S5H4 581 aa13.87□□□□□ -0.19
PDE4D-209ENST00000502575 MAST1Q9Y2H9 1570 aa13.87□□□□□ -0.19
PDE4D-209ENST00000502575 POLR1AO95602 1720 aaPredicted RBP13.85□□□□□ -0.19
PDE4D-209ENST00000502575 RTEL1-TNFRSF6BF6WH68 1400 aa13.85□□□□□ -0.19
PDE4D-209ENST00000502575 KANK4Q5T7N3 995 aaPredicted RBP13.85□□□□□ -0.19
PDE4D-209ENST00000502575 CEP170BQ9Y4F5 1589 aaPredicted RBP13.84□□□□□ -0.19
PDE4D-209ENST00000502575 RNF17Q9BXT8 1623 aaKnown RBP13.84□□□□□ -0.19
PDE4D-209ENST00000502575 GTPBP6O43824 516 aaPredicted RBP13.84□□□□□ -0.19
PDE4D-209ENST00000502575 VARS2Q5ST30 1063 aaKnown RBP13.84□□□□□ -0.19
PDE4D-209ENST00000502575 CAMSAP1Q5T5Y3 1602 aa13.83□□□□□ -0.2
PDE4D-209ENST00000502575 PTPN23Q9H3S7 1636 aa13.83□□□□□ -0.2
PDE4D-209ENST00000502575 ESF1Q9H501 851 aaKnown RBP13.83□□□□□ -0.2
PDE4D-209ENST00000502575 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
PDE4D-209ENST00000502575 ZNF687Q8N1G0 1237 aa13.82□□□□□ -0.2
PDE4D-209ENST00000502575 KRTAP3-3Q9BYR6 98 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms