RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 SCAF11Q99590 1463 aaKnown RBP20.14■□□□□ 0.81
PARP1-209ENST00000498787 ZFYVE9O95405 1425 aa20.14■□□□□ 0.81
PARP1-209ENST00000498787 ZMYM3Q14202 1370 aa20.14■□□□□ 0.81
PARP1-209ENST00000498787 STAG3Q9UJ98 1225 aa20.14■□□□□ 0.81
PARP1-209ENST00000498787 SPATA31D1Q6ZQQ2 1576 aa20.13■□□□□ 0.81
PARP1-209ENST00000498787 CDCA8Q53HL2 280 aa20.12■□□□□ 0.81
PARP1-209ENST00000498787 SIGLEC1Q9BZZ2 1709 aa20.12■□□□□ 0.81
PARP1-209ENST00000498787 CLTCQ00610 1675 aaKnown RBP20.12■□□□□ 0.81
PARP1-209ENST00000498787 ADGRF5Q8IZF2 1346 aa20.11■□□□□ 0.81
PARP1-209ENST00000498787 CCER2I3L3R5 266 aa20.11■□□□□ 0.81
PARP1-209ENST00000498787 TMF1P82094 1093 aa20.11■□□□□ 0.81
PARP1-209ENST00000498787 POLR1AO95602 1720 aaPredicted RBP20.1■□□□□ 0.81
PARP1-209ENST00000498787 C11orf95C9JLR9 678 aaPredicted RBP20.1■□□□□ 0.81
PARP1-209ENST00000498787 HDGFP51858 240 aaKnown RBP20.1■□□□□ 0.81
PARP1-209ENST00000498787 FBXO31Q5XUX0 539 aaPredicted RBP20.1■□□□□ 0.81
PARP1-209ENST00000498787 C14orf93Q9H972 538 aaKnown RBP20.09■□□□□ 0.81
PARP1-209ENST00000498787 IFT172Q9UG01 1749 aa20.09■□□□□ 0.81
PARP1-209ENST00000498787 MROH2AA6NES4 1674 aa20.08■□□□□ 0.81
PARP1-209ENST00000498787 CENPBP07199 599 aaPredicted RBP20.08■□□□□ 0.81
PARP1-209ENST00000498787 PIK3C2GO75747 1445 aa20.08■□□□□ 0.8
PARP1-209ENST00000498787 CFAP70Q5T0N1 1121 aa20.07■□□□□ 0.8
PARP1-209ENST00000498787 SETBP1Q9Y6X0 1596 aa20.07■□□□□ 0.8
PARP1-209ENST00000498787 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.06■□□□□ 0.8
PARP1-209ENST00000498787 CFAP65Q6ZU64 1925 aaKnown RBP20.06■□□□□ 0.8
PARP1-209ENST00000498787 PPLO60437 1756 aa20.06■□□□□ 0.8
PARP1-209ENST00000498787 NEXMIFQ5QGS0 1516 aa20.04■□□□□ 0.8
PARP1-209ENST00000498787 TMEM131LA2VDJ0 1609 aa20.04■□□□□ 0.8
PARP1-209ENST00000498787 TNRQ92752 1358 aa20.04■□□□□ 0.8
PARP1-209ENST00000498787 TESK2Q96S53 571 aa20.03■□□□□ 0.8
PARP1-209ENST00000498787 POLR3GLQ9BT43 218 aa20.03■□□□□ 0.8
PARP1-209ENST00000498787 IQGAP1P46940 1657 aa20■□□□□ 0.79
PARP1-209ENST00000498787 A2ML1A8K2U0 1454 aa19.99■□□□□ 0.79
PARP1-209ENST00000498787 SBNO2Q9Y2G9 1366 aa19.98■□□□□ 0.79
PARP1-209ENST00000498787 NLRP1Q9C000 1473 aa19.98■□□□□ 0.79
PARP1-209ENST00000498787 KTN1Q86UP2 1357 aaKnown RBP19.96■□□□□ 0.79
PARP1-209ENST00000498787 RIMS2Q9UQ26 1411 aa19.95■□□□□ 0.78
PARP1-209ENST00000498787 CENPJQ9HC77 1338 aaPredicted RBP19.95■□□□□ 0.78
PARP1-209ENST00000498787 KDM5AP29375 1690 aaKnown RBP19.94■□□□□ 0.78
PARP1-209ENST00000498787 PRKRIP1Q9H875 184 aaPredicted RBP19.93■□□□□ 0.78
PARP1-209ENST00000498787 ADGRB1O14514 1584 aa19.92■□□□□ 0.78
PARP1-209ENST00000498787 PUS7Q96PZ0 661 aaKnown RBP19.91■□□□□ 0.78
PARP1-209ENST00000498787 DISP3Q9P2K9 1392 aa19.91■□□□□ 0.78
PARP1-209ENST00000498787 NUTM2DQ5VT03 806 aaPredicted RBP19.9■□□□□ 0.78
PARP1-209ENST00000498787 MYO3AQ8NEV4 1616 aa19.89■□□□□ 0.77
PARP1-209ENST00000498787 TRAK1Q9UPV9 953 aa19.89■□□□□ 0.77
PARP1-209ENST00000498787 RALBP1Q15311 655 aa19.88■□□□□ 0.77
PARP1-209ENST00000498787 TMEM2Q9UHN6 1383 aa19.87■□□□□ 0.77
PARP1-209ENST00000498787 TMEM132EQ6IEE7 984 aa19.87■□□□□ 0.77
PARP1-209ENST00000498787 YTHDC1Q96MU7 727 aaKnown RBP19.87■□□□□ 0.77
PARP1-209ENST00000498787 FER1L4A9Z1Z3 1794 aa19.86■□□□□ 0.77
PARP1-209ENST00000498787 EID1Q9Y6B2 187 aa19.86■□□□□ 0.77
PARP1-209ENST00000498787 THEMISQ8N1K5 641 aaPredicted RBP19.85■□□□□ 0.77
PARP1-209ENST00000498787 MYO5BQ9ULV0 1848 aa19.84■□□□□ 0.77
PARP1-209ENST00000498787 ALKQ9UM73 1620 aa19.84■□□□□ 0.77
PARP1-209ENST00000498787 EVC2Q86UK5 1308 aa19.83■□□□□ 0.77
PARP1-209ENST00000498787 YTHDC2Q9H6S0 1430 aaKnown RBP19.83■□□□□ 0.76
PARP1-209ENST00000498787 CEBPAP49715 358 aaPredicted RBP19.82■□□□□ 0.76
PARP1-209ENST00000498787 PANK3Q9H999 370 aa19.82■□□□□ 0.76
PARP1-209ENST00000498787 C3P01024 1663 aa19.81■□□□□ 0.76
PARP1-209ENST00000498787 LRPPRCP42704 1394 aaKnown RBP19.81■□□□□ 0.76
PARP1-209ENST00000498787 SIRT1Q96EB6 747 aa19.8■□□□□ 0.76
PARP1-209ENST00000498787 POGKQ9P215 609 aa19.8■□□□□ 0.76
PARP1-209ENST00000498787 KNSTRNQ9Y448 316 aa19.8■□□□□ 0.76
PARP1-209ENST00000498787 PER1O15534 1290 aaPredicted RBP19.79■□□□□ 0.76
PARP1-209ENST00000498787 ABCC11Q96J66 1382 aa19.79■□□□□ 0.76
PARP1-209ENST00000498787 PLEKHG1Q9ULL1 1385 aa19.79■□□□□ 0.76
PARP1-209ENST00000498787 UBR1Q8IWV7 1749 aa19.79■□□□□ 0.76
PARP1-209ENST00000498787 DLC1Q96QB1 1528 aa19.78■□□□□ 0.76
PARP1-209ENST00000498787 BCANQ96GW7 911 aa19.78■□□□□ 0.76
PARP1-209ENST00000498787 TXNDC2Q86VQ3 553 aa19.77■□□□□ 0.76
PARP1-209ENST00000498787 MRS2Q9HD23 443 aa19.77■□□□□ 0.76
PARP1-209ENST00000498787 STK26Q9P289 416 aa19.77■□□□□ 0.76
PARP1-209ENST00000498787 MYBBP1AQ9BQG0 1328 aaKnown RBP19.76■□□□□ 0.75
PARP1-209ENST00000498787 NINLQ9Y2I6 1382 aa19.76■□□□□ 0.75
PARP1-209ENST00000498787 SLIT1O75093 1534 aa19.76■□□□□ 0.75
PARP1-209ENST00000498787 ARHGAP23Q9P227 1491 aa19.75■□□□□ 0.75
PARP1-209ENST00000498787 NPC1L1Q9UHC9 1359 aa19.75■□□□□ 0.75
PARP1-209ENST00000498787 ASXL1Q8IXJ9 1541 aa19.75■□□□□ 0.75
PARP1-209ENST00000498787 QRICH2Q9H0J4 1663 aa19.74■□□□□ 0.75
PARP1-209ENST00000498787 ADAMTSL3P82987 1691 aa19.73■□□□□ 0.75
PARP1-209ENST00000498787 PRAM1Q96QH2 718 aa19.73■□□□□ 0.75
PARP1-209ENST00000498787 ARHGEF28Q8N1W1 1705 aaKnown RBP19.73■□□□□ 0.75
PARP1-209ENST00000498787 BRD4O60885 1362 aaPredicted RBP19.72■□□□□ 0.75
PARP1-209ENST00000498787 ATAD2Q6PL18 1390 aa19.72■□□□□ 0.75
PARP1-209ENST00000498787 PTPRMP28827 1452 aa19.72■□□□□ 0.75
PARP1-209ENST00000498787 PARD3Q8TEW0 1356 aa19.71■□□□□ 0.75
PARP1-209ENST00000498787 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
PARP1-209ENST00000498787 NLRP13Q86W25 1043 aa19.71■□□□□ 0.75
PARP1-209ENST00000498787 FAM135BQ49AJ0 1406 aa19.7■□□□□ 0.74
PARP1-209ENST00000498787 TMC1Q8TDI8 760 aa19.7■□□□□ 0.74
PARP1-209ENST00000498787 TBX22Q9Y458 520 aa19.7■□□□□ 0.74
PARP1-209ENST00000498787 RIMS1Q86UR5 1692 aaKnown RBP19.7■□□□□ 0.74
PARP1-209ENST00000498787 TECPR2O15040 1411 aa19.68■□□□□ 0.74
PARP1-209ENST00000498787 LTKP29376 864 aa19.67■□□□□ 0.74
PARP1-209ENST00000498787 CEP170BQ9Y4F5 1589 aaPredicted RBP19.66■□□□□ 0.74
PARP1-209ENST00000498787 SRPK2P78362 688 aaKnown RBP19.66■□□□□ 0.74
PARP1-209ENST00000498787 METP08581 1390 aa19.66■□□□□ 0.74
PARP1-209ENST00000498787 ADAMTS13Q76LX8 1427 aa19.66■□□□□ 0.74
PARP1-209ENST00000498787 DIP2AQ14689 1571 aa19.66■□□□□ 0.74
PARP1-209ENST00000498787 NRXN3Q9Y4C0 1643 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms