RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 TRAIPQ9BWF2 469 aa10.72□□□□□ -0.69
PMPCB-208ENST00000498530 CCDC9Q9Y3X0 531 aaKnown RBP10.72□□□□□ -0.69
PMPCB-208ENST00000498530 CLK2P49760 499 aaKnown RBP10.71□□□□□ -0.69
PMPCB-208ENST00000498530 DIXDC1Q155Q3 683 aa10.71□□□□□ -0.69
PMPCB-208ENST00000498530 PXYLP1Q8TE99 480 aa10.71□□□□□ -0.69
PMPCB-208ENST00000498530 NECTIN2Q92692 538 aa10.71□□□□□ -0.69
PMPCB-208ENST00000498530 JPH4Q96JJ6 628 aa10.71□□□□□ -0.69
PMPCB-208ENST00000498530 ZNF777Q9ULD5 760 aaPredicted RBP10.71□□□□□ -0.69
PMPCB-208ENST00000498530 COG6Q9Y2V7 657 aa10.71□□□□□ -0.69
PMPCB-208ENST00000498530 PCDHGA4Q9Y5G9 962 aa10.71□□□□□ -0.69
PMPCB-208ENST00000498530 TTC13Q8NBP0 860 aa10.7□□□□□ -0.7
PMPCB-208ENST00000498530 ADGRG1Q9Y653 693 aa10.7□□□□□ -0.7
PMPCB-208ENST00000498530 SOCS7O14512 581 aa10.69□□□□□ -0.7
PMPCB-208ENST00000498530 ADGRD1Q6QNK2 874 aa10.69□□□□□ -0.7
PMPCB-208ENST00000498530 RBM33Q96EV2 1170 aaKnown RBP10.69□□□□□ -0.7
PMPCB-208ENST00000498530 POLR3EQ9NVU0 708 aa10.68□□□□□ -0.7
PMPCB-208ENST00000498530 RFC5P40937 340 aa10.67□□□□□ -0.7
PMPCB-208ENST00000498530 PPP2R2DQ66LE6 453 aa10.67□□□□□ -0.7
PMPCB-208ENST00000498530 KDM4FA0A1W2PPD8 638 aa10.66□□□□□ -0.7
PMPCB-208ENST00000498530 PADI6Q6TGC4 694 aa10.66□□□□□ -0.7
PMPCB-208ENST00000498530 TUSC1Q2TAM9 212 aa10.65□□□□□ -0.7
PMPCB-208ENST00000498530 TMEM259Q4ZIN3 620 aa10.65□□□□□ -0.7
PMPCB-208ENST00000498530 KCTD17Q8N5Z5 321 aa10.65□□□□□ -0.7
PMPCB-208ENST00000498530 TBC1D2Q9BYX2 928 aa10.65□□□□□ -0.7
PMPCB-208ENST00000498530 ARHGAP33O14559 1287 aa10.64□□□□□ -0.71
PMPCB-208ENST00000498530 FOSBP53539 338 aa10.63□□□□□ -0.71
PMPCB-208ENST00000498530 FAM161AQ3B820 660 aa10.63□□□□□ -0.71
PMPCB-208ENST00000498530 ATP1B4Q9UN42 357 aaPredicted RBP10.62□□□□□ -0.71
PMPCB-208ENST00000498530 C6orf132Q5T0Z8 1188 aa10.61□□□□□ -0.71
PMPCB-208ENST00000498530 NLRP7Q8WX94 980 aa10.61□□□□□ -0.71
PMPCB-208ENST00000498530 SNRKQ9NRH2 765 aa10.61□□□□□ -0.71
PMPCB-208ENST00000498530 HRO43593 1189 aa10.6□□□□□ -0.71
PMPCB-208ENST00000498530 ZNF330Q9Y3S2 320 aaPredicted RBP10.6□□□□□ -0.71
PMPCB-208ENST00000498530 TK2O00142 265 aa10.59□□□□□ -0.71
PMPCB-208ENST00000498530 DMRTA1Q5VZB9 504 aa10.59□□□□□ -0.71
PMPCB-208ENST00000498530 RBM46Q8TBY0 533 aaKnown RBP10.59□□□□□ -0.71
PMPCB-208ENST00000498530 LIMD1Q9UGP4 676 aa10.59□□□□□ -0.71
PMPCB-208ENST00000498530 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.58□□□□□ -0.72
PMPCB-208ENST00000498530 PSDA5PKW4 1024 aaPredicted RBP10.58□□□□□ -0.72
PMPCB-208ENST00000498530 FBXO31Q5XUX0 539 aaPredicted RBP10.58□□□□□ -0.72
PMPCB-208ENST00000498530 MTMR14Q8NCE2 650 aa10.58□□□□□ -0.72
PMPCB-208ENST00000498530 GJA5P36382 358 aa10.57□□□□□ -0.72
PMPCB-208ENST00000498530 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
PMPCB-208ENST00000498530 SPTLC1O15269 473 aa10.56□□□□□ -0.72
PMPCB-208ENST00000498530 PPP1R15AO75807 674 aaPredicted RBP10.56□□□□□ -0.72
PMPCB-208ENST00000498530 PSEN2P49810 448 aa10.56□□□□□ -0.72
PMPCB-208ENST00000498530 PRSS12P56730 875 aa10.56□□□□□ -0.72
PMPCB-208ENST00000498530 RIC3Q7Z5B4 369 aa10.56□□□□□ -0.72
PMPCB-208ENST00000498530 WWC1Q8IX03 1113 aa10.56□□□□□ -0.72
PMPCB-208ENST00000498530 SPIRE2Q8WWL2 714 aa10.56□□□□□ -0.72
PMPCB-208ENST00000498530 CD46P15529 392 aa10.55□□□□□ -0.72
PMPCB-208ENST00000498530 RETREG2Q8NC44 543 aa10.55□□□□□ -0.72
PMPCB-208ENST00000498530 KCTD12Q96CX2 325 aaKnown RBP10.54□□□□□ -0.72
PMPCB-208ENST00000498530 RSBN1LQ6PCB5 846 aaPredicted RBP10.52□□□□□ -0.73
PMPCB-208ENST00000498530 SULF1Q8IWU6 871 aa10.52□□□□□ -0.73
PMPCB-208ENST00000498530 CDCA7LQ96GN5 454 aa10.52□□□□□ -0.73
PMPCB-208ENST00000498530 PRM3Q9NNZ6 103 aa10.52□□□□□ -0.73
PMPCB-208ENST00000498530 ZNF454Q8N9F8 522 aa10.51□□□□□ -0.73
PMPCB-208ENST00000498530 GDPD2Q9HCC8 539 aa10.51□□□□□ -0.73
PMPCB-208ENST00000498530 ADAM33Q9BZ11 813 aa10.5□□□□□ -0.73
PMPCB-208ENST00000498530 RCCD1A6NED2 376 aa10.49□□□□□ -0.73
PMPCB-208ENST00000498530 PDE4CQ08493 712 aa10.49□□□□□ -0.73
PMPCB-208ENST00000498530 EYA1Q99502 592 aa10.49□□□□□ -0.73
PMPCB-208ENST00000498530 LILRB3O75022 631 aa10.48□□□□□ -0.73
PMPCB-208ENST00000498530 GLMNQ92990 594 aa10.47□□□□□ -0.73
PMPCB-208ENST00000498530 CALR3Q96L12 384 aaKnown RBP10.47□□□□□ -0.73
PMPCB-208ENST00000498530 PPP4R3BQ5MIZ7 849 aa10.46□□□□□ -0.73
PMPCB-208ENST00000498530 NUTM1Q86Y26 1132 aa10.46□□□□□ -0.73
PMPCB-208ENST00000498530 FAM198AQ9UFP1 575 aa10.46□□□□□ -0.73
PMPCB-208ENST00000498530 MOXD2PA6NHM9 499 aa10.45□□□□□ -0.74
PMPCB-208ENST00000498530 ABL2P42684 1182 aa10.45□□□□□ -0.74
PMPCB-208ENST00000498530 IRF5Q13568 498 aa10.45□□□□□ -0.74
PMPCB-208ENST00000498530 QPCTQ16769 361 aa10.45□□□□□ -0.74
PMPCB-208ENST00000498530 PRPF38BQ5VTL8 546 aaKnown RBP10.45□□□□□ -0.74
PMPCB-208ENST00000498530 AEBP1Q8IUX7 1158 aa10.45□□□□□ -0.74
PMPCB-208ENST00000498530 TBC1D2BQ9UPU7 963 aa10.45□□□□□ -0.74
PMPCB-208ENST00000498530 DNAJB2P25686 324 aa10.44□□□□□ -0.74
PMPCB-208ENST00000498530 POM121CA8CG34 1229 aa10.43□□□□□ -0.74
PMPCB-208ENST00000498530 PATL2C9JE40 543 aaKnown RBP10.43□□□□□ -0.74
PMPCB-208ENST00000498530 RGS20O76081 388 aa10.43□□□□□ -0.74
PMPCB-208ENST00000498530 USP17L8P0C7I0 530 aa10.43□□□□□ -0.74
PMPCB-208ENST00000498530 STAC3Q96MF2 364 aa10.43□□□□□ -0.74
PMPCB-208ENST00000498530 TMEM134Q9H6X4 195 aa10.43□□□□□ -0.74
PMPCB-208ENST00000498530 KCNK17Q96T54 332 aa10.42□□□□□ -0.74
PMPCB-208ENST00000498530 AP1G2O75843 785 aa10.41□□□□□ -0.74
PMPCB-208ENST00000498530 PTPN5P54829 565 aa10.41□□□□□ -0.74
PMPCB-208ENST00000498530 IFFO2Q5TF58 517 aa10.41□□□□□ -0.74
PMPCB-208ENST00000498530 GJD4Q96KN9 370 aaPredicted RBP10.41□□□□□ -0.74
PMPCB-208ENST00000498530 NDUFB9Q9Y6M9 179 aa10.41□□□□□ -0.74
PMPCB-208ENST00000498530 ACIN1Q9UKV3 1341 aaKnown RBP10.4□□□□□ -0.74
PMPCB-208ENST00000498530 DDX11L8A8MPP1 907 aa10.4□□□□□ -0.74
PMPCB-208ENST00000498530 NBPF26B4DH59 902 aa10.4□□□□□ -0.74
PMPCB-208ENST00000498530 PPP1R3GB7ZBB8 358 aa10.4□□□□□ -0.74
PMPCB-208ENST00000498530 PBXIP1Q96AQ6 731 aa10.4□□□□□ -0.74
PMPCB-208ENST00000498530 BCL2L12Q9HB09 334 aa10.4□□□□□ -0.74
PMPCB-208ENST00000498530 TSKSQ9UJT2 592 aa10.4□□□□□ -0.74
PMPCB-208ENST00000498530 VPS9D1Q9Y2B5 631 aa10.4□□□□□ -0.74
PMPCB-208ENST00000498530 COL9A1P20849 921 aa10.39□□□□□ -0.75
PMPCB-208ENST00000498530 USP46P62068 366 aa10.39□□□□□ -0.75
PMPCB-208ENST00000498530 CSPP1Q1MSJ5 1256 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms