RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 WDR43Q15061 677 aaKnown RBP eCLIP14.48□□□□□ -0.09
PBX1-211ENST00000498497 CSPP1Q1MSJ5 1256 aa14.48□□□□□ -0.09
PBX1-211ENST00000498497 RBM25P49756 843 aaKnown RBP14.47□□□□□ -0.09
PBX1-211ENST00000498497 TTC12Q9H892 705 aaPredicted RBP14.47□□□□□ -0.09
PBX1-211ENST00000498497 TOMM22Q9NS69 142 aa14.47□□□□□ -0.09
PBX1-211ENST00000498497 KIF3AQ9Y496 699 aa14.47□□□□□ -0.09
PBX1-211ENST00000498497 MYBBP1AQ9BQG0 1328 aaKnown RBP14.47□□□□□ -0.09
PBX1-211ENST00000498497 SOX12O15370 315 aa14.46□□□□□ -0.09
PBX1-211ENST00000498497 LOC102724159A0A0B4J2E5 919 aa14.46□□□□□ -0.09
PBX1-211ENST00000498497 GOLGA6L22H0YM25 854 aa14.46□□□□□ -0.09
PBX1-211ENST00000498497 PWP2Q15269 919 aaKnown RBP14.46□□□□□ -0.09
PBX1-211ENST00000498497 NEUROD2Q15784 382 aa14.46□□□□□ -0.09
PBX1-211ENST00000498497 SYCE3A1L190 88 aa14.46□□□□□ -0.1
PBX1-211ENST00000498497 RBM42Q9BTD8 480 aaKnown RBP14.46□□□□□ -0.1
PBX1-211ENST00000498497 PDE3BQ13370 1112 aa14.45□□□□□ -0.1
PBX1-211ENST00000498497 TNNQ9UQP3 1299 aa14.45□□□□□ -0.1
PBX1-211ENST00000498497 ZNF500O60304 480 aaPredicted RBP14.45□□□□□ -0.1
PBX1-211ENST00000498497 TERF1P54274 439 aa14.45□□□□□ -0.1
PBX1-211ENST00000498497 KIAA2012Q0VF49 1180 aa14.45□□□□□ -0.1
PBX1-211ENST00000498497 MYRIPQ8NFW9 859 aa14.44□□□□□ -0.1
PBX1-211ENST00000498497 PDZRN3Q9UPQ7 1066 aa14.44□□□□□ -0.1
PBX1-211ENST00000498497 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.44□□□□□ -0.1
PBX1-211ENST00000498497 NAA30Q147X3 362 aaPredicted RBP14.44□□□□□ -0.1
PBX1-211ENST00000498497 SAMD1Q6SPF0 538 aaPredicted RBP14.44□□□□□ -0.1
PBX1-211ENST00000498497 CAPN2P17655 700 aa14.43□□□□□ -0.1
PBX1-211ENST00000498497 ADAMTS8Q9UP79 889 aa14.43□□□□□ -0.1
PBX1-211ENST00000498497 ZSCAN23Q3MJ62 389 aa14.43□□□□□ -0.1
PBX1-211ENST00000498497 NPHP1O15259 732 aa14.42□□□□□ -0.1
PBX1-211ENST00000498497 GPATCH11Q8N954 259 aa14.42□□□□□ -0.1
PBX1-211ENST00000498497 DNAJC2Q99543 621 aaKnown RBP14.42□□□□□ -0.1
PBX1-211ENST00000498497 MPHOSPH9Q99550 1183 aa14.42□□□□□ -0.1
PBX1-211ENST00000498497 NBPF1Q3BBV0 1214 aa14.42□□□□□ -0.1
PBX1-211ENST00000498497 PRPF40AO75400 957 aaKnown RBP14.41□□□□□ -0.1
PBX1-211ENST00000498497 TIGD1Q96MW7 591 aa14.41□□□□□ -0.1
PBX1-211ENST00000498497 CD2BP2O95400 341 aaKnown RBP14.41□□□□□ -0.1
PBX1-211ENST00000498497 ST7Q9NRC1 585 aa14.41□□□□□ -0.1
PBX1-211ENST00000498497 ISY1Q9ULR0 285 aaKnown RBP14.41□□□□□ -0.1
PBX1-211ENST00000498497 NLRP13Q86W25 1043 aa14.41□□□□□ -0.1
PBX1-211ENST00000498497 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
PBX1-211ENST00000498497 ST20-MTHFSA0A0A6YYL1 179 aa14.4□□□□□ -0.1
PBX1-211ENST00000498497 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
PBX1-211ENST00000498497 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.4□□□□□ -0.1
PBX1-211ENST00000498497 V9GYY5 206 aaPredicted RBP14.4□□□□□ -0.1
PBX1-211ENST00000498497 USP47Q96K76 1375 aa14.4□□□□□ -0.1
PBX1-211ENST00000498497 CARD11Q9BXL7 1154 aa14.39□□□□□ -0.11
PBX1-211ENST00000498497 UACAQ9BZF9 1416 aa14.39□□□□□ -0.11
PBX1-211ENST00000498497 MAPK8IP3Q9UPT6 1336 aa14.39□□□□□ -0.11
PBX1-211ENST00000498497 SKOR2Q2VWA4 1001 aaPredicted RBP14.39□□□□□ -0.11
PBX1-211ENST00000498497 TAF3Q5VWG9 929 aa14.39□□□□□ -0.11
PBX1-211ENST00000498497 PTMSP20962 102 aa14.38□□□□□ -0.11
PBX1-211ENST00000498497 PKP1Q13835 747 aa14.38□□□□□ -0.11
PBX1-211ENST00000498497 CCDC39Q9UFE4 941 aa14.38□□□□□ -0.11
PBX1-211ENST00000498497 DUSP27Q5VZP5 1158 aa14.38□□□□□ -0.11
PBX1-211ENST00000498497 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
PBX1-211ENST00000498497 SYNJ1O43426 1573 aa14.38□□□□□ -0.11
PBX1-211ENST00000498497 PTPRKQ15262 1439 aa14.38□□□□□ -0.11
PBX1-211ENST00000498497 KDM5BQ9UGL1 1544 aa14.37□□□□□ -0.11
PBX1-211ENST00000498497 RIOK3O14730 519 aaKnown RBP14.37□□□□□ -0.11
PBX1-211ENST00000498497 SLC4A1APQ9BWU0 796 aaKnown RBP14.37□□□□□ -0.11
PBX1-211ENST00000498497 GOLGA2Q08379 1002 aa14.36□□□□□ -0.11
PBX1-211ENST00000498497 RNF216Q9NWF9 866 aaPredicted RBP14.36□□□□□ -0.11
PBX1-211ENST00000498497 PCDHB15Q9Y5E8 787 aa14.36□□□□□ -0.11
PBX1-211ENST00000498497 LRPPRCP42704 1394 aaKnown RBP14.36□□□□□ -0.11
PBX1-211ENST00000498497 NOLC1Q14978 699 aaKnown RBP eCLIP14.36□□□□□ -0.11
PBX1-211ENST00000498497 ARHGAP35Q9NRY4 1499 aa14.36□□□□□ -0.11
PBX1-211ENST00000498497 BAG4O95429 457 aaKnown RBP14.35□□□□□ -0.11
PBX1-211ENST00000498497 GYS2P54840 703 aa14.35□□□□□ -0.11
PBX1-211ENST00000498497 SRPK2P78362 688 aaKnown RBP14.35□□□□□ -0.11
PBX1-211ENST00000498497 TMED8Q6PL24 325 aaPredicted RBP14.35□□□□□ -0.11
PBX1-211ENST00000498497 MYOM3Q5VTT5 1437 aa14.35□□□□□ -0.11
PBX1-211ENST00000498497 KIF15Q9NS87 1388 aa14.35□□□□□ -0.11
PBX1-211ENST00000498497 SPC24Q8NBT2 197 aa14.35□□□□□ -0.11
PBX1-211ENST00000498497 USP25Q9UHP3 1055 aa14.35□□□□□ -0.11
PBX1-211ENST00000498497 RSPH14Q9UHP6 348 aa14.35□□□□□ -0.11
PBX1-211ENST00000498497 CCDC66A2RUB6 948 aa14.34□□□□□ -0.11
PBX1-211ENST00000498497 GAS2L2Q8NHY3 880 aa14.34□□□□□ -0.11
PBX1-211ENST00000498497 NSFL1CQ9UNZ2 370 aaKnown RBP14.34□□□□□ -0.11
PBX1-211ENST00000498497 GTF2F1P35269 517 aaKnown RBP eCLIP14.33□□□□□ -0.11
PBX1-211ENST00000498497 RAB3GAP1Q15042 981 aa14.33□□□□□ -0.11
PBX1-211ENST00000498497 ZNF592Q92610 1267 aa14.33□□□□□ -0.11
PBX1-211ENST00000498497 LRRC9Q6ZRR7 1453 aa14.33□□□□□ -0.11
PBX1-211ENST00000498497 NLRP1Q9C000 1473 aa14.33□□□□□ -0.11
PBX1-211ENST00000498497 BRD4O60885 1362 aaPredicted RBP14.33□□□□□ -0.12
PBX1-211ENST00000498497 BAZ1AQ9NRL2 1556 aaPredicted RBP14.33□□□□□ -0.12
PBX1-211ENST00000498497 RALBP1Q15311 655 aa14.32□□□□□ -0.12
PBX1-211ENST00000498497 KLHL40Q2TBA0 621 aa14.32□□□□□ -0.12
PBX1-211ENST00000498497 CHAF1AQ13111 956 aaPredicted RBP14.32□□□□□ -0.12
PBX1-211ENST00000498497 PLEKHH1Q9ULM0 1364 aa14.31□□□□□ -0.12
PBX1-211ENST00000498497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.31□□□□□ -0.12
PBX1-211ENST00000498497 C10orf67Q8IYJ2 551 aa14.31□□□□□ -0.12
PBX1-211ENST00000498497 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
PBX1-211ENST00000498497 APAF1O14727 1248 aa14.3□□□□□ -0.12
PBX1-211ENST00000498497 NOL8Q76FK4 1167 aaKnown RBP14.3□□□□□ -0.12
PBX1-211ENST00000498497 AK9Q5TCS8 1911 aa14.3□□□□□ -0.12
PBX1-211ENST00000498497 SLFN14P0C7P3 912 aa14.3□□□□□ -0.12
PBX1-211ENST00000498497 HMGN5P82970 282 aaKnown RBP14.3□□□□□ -0.12
PBX1-211ENST00000498497 CHRM1P11229 460 aaPredicted RBP14.3□□□□□ -0.12
PBX1-211ENST00000498497 FAM193AP78312 1265 aa14.3□□□□□ -0.12
PBX1-211ENST00000498497 RRP7AQ9Y3A4 280 aaKnown RBP14.29□□□□□ -0.12
PBX1-211ENST00000498497 FMN1Q68DA7 1419 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms