RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 PTGDRQ13258 359 aa7.91□□□□□ -1.14
CMSS1-209ENST00000497345 ABCC8Q09428 1581 aa7.9□□□□□ -1.14
CMSS1-209ENST00000497345 SEMA3EO15041 775 aa7.9□□□□□ -1.14
CMSS1-209ENST00000497345 FAM9AQ8IZU1 332 aaPredicted RBP7.9□□□□□ -1.14
CMSS1-209ENST00000497345 EYA1Q99502 592 aa7.9□□□□□ -1.14
CMSS1-209ENST00000497345 SWT1Q5T5J6 900 aaKnown RBP7.89□□□□□ -1.15
CMSS1-209ENST00000497345 NUTM2FA1L443 756 aa7.88□□□□□ -1.15
CMSS1-209ENST00000497345 RNF40O75150 1001 aa7.88□□□□□ -1.15
CMSS1-209ENST00000497345 TJAP1Q5JTD0 557 aa7.88□□□□□ -1.15
CMSS1-209ENST00000497345 NESP48681 1621 aa7.86□□□□□ -1.15
CMSS1-209ENST00000497345 SLF2Q8IX21 1173 aa7.86□□□□□ -1.15
CMSS1-209ENST00000497345 NECTIN2Q92692 538 aa7.86□□□□□ -1.15
CMSS1-209ENST00000497345 APLP1P51693 650 aa7.85□□□□□ -1.15
CMSS1-209ENST00000497345 MTRQ99707 1265 aa7.85□□□□□ -1.15
CMSS1-209ENST00000497345 FCHSD2O94868 740 aa7.84□□□□□ -1.15
CMSS1-209ENST00000497345 SLC4A3P48751 1232 aa7.84□□□□□ -1.15
CMSS1-209ENST00000497345 HAP1P54257 671 aaPredicted RBP7.84□□□□□ -1.15
CMSS1-209ENST00000497345 IL21Q9HBE4 155 aa7.84□□□□□ -1.15
CMSS1-209ENST00000497345 CADPSQ9ULU8 1353 aa7.84□□□□□ -1.16
CMSS1-209ENST00000497345 TESPA1A2RU30 521 aaPredicted RBP7.83□□□□□ -1.16
CMSS1-209ENST00000497345 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
CMSS1-209ENST00000497345 ADGRG1Q9Y653 693 aa7.83□□□□□ -1.16
CMSS1-209ENST00000497345 DNAJB2P25686 324 aa7.82□□□□□ -1.16
CMSS1-209ENST00000497345 SMYD5Q6GMV2 418 aa7.82□□□□□ -1.16
CMSS1-209ENST00000497345 ZNF516Q92618 1163 aa7.82□□□□□ -1.16
CMSS1-209ENST00000497345 IRX2Q9BZI1 471 aaPredicted RBP7.82□□□□□ -1.16
CMSS1-209ENST00000497345 CFTRP13569 1480 aa7.81□□□□□ -1.16
CMSS1-209ENST00000497345 FAM161AQ3B820 660 aa7.81□□□□□ -1.16
CMSS1-209ENST00000497345 WRNQ14191 1432 aaPredicted RBP eCLIP7.8□□□□□ -1.16
CMSS1-209ENST00000497345 LOC105371045A0A1W2PR82 267 aa7.8□□□□□ -1.16
CMSS1-209ENST00000497345 RBM26Q5T8P6 1007 aaKnown RBP7.8□□□□□ -1.16
CMSS1-209ENST00000497345 TMEM134Q9H6X4 195 aa7.8□□□□□ -1.16
CMSS1-209ENST00000497345 KDM2AQ9Y2K7 1162 aa7.8□□□□□ -1.16
CMSS1-209ENST00000497345 RCCD1A6NED2 376 aa7.79□□□□□ -1.16
CMSS1-209ENST00000497345 HIC1Q14526 733 aa7.78□□□□□ -1.16
CMSS1-209ENST00000497345 PRR14Q9BWN1 585 aa7.78□□□□□ -1.16
CMSS1-209ENST00000497345 SYNJ1O43426 1573 aa7.78□□□□□ -1.16
CMSS1-209ENST00000497345 FANCD2Q9BXW9 1451 aa7.77□□□□□ -1.17
CMSS1-209ENST00000497345 OATP04181 439 aa7.77□□□□□ -1.17
CMSS1-209ENST00000497345 COPS2P61201 443 aa7.77□□□□□ -1.17
CMSS1-209ENST00000497345 PPP1R18Q6NYC8 613 aa7.77□□□□□ -1.17
CMSS1-209ENST00000497345 NKX2-3Q8TAU0 364 aa7.77□□□□□ -1.17
CMSS1-209ENST00000497345 PRDM2Q13029 1718 aa7.76□□□□□ -1.17
CMSS1-209ENST00000497345 PXYLP1Q8TE99 480 aa7.76□□□□□ -1.17
CMSS1-209ENST00000497345 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.75□□□□□ -1.17
CMSS1-209ENST00000497345 ZPR1O75312 459 aa7.75□□□□□ -1.17
CMSS1-209ENST00000497345 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.75□□□□□ -1.17
CMSS1-209ENST00000497345 PCDHB3Q9Y5E6 796 aa7.75□□□□□ -1.17
CMSS1-209ENST00000497345 FECHP22830 423 aa7.74□□□□□ -1.17
CMSS1-209ENST00000497345 SOGA1O94964 1423 aa7.74□□□□□ -1.17
CMSS1-209ENST00000497345 LAMC3Q9Y6N6 1575 aa7.74□□□□□ -1.17
CMSS1-209ENST00000497345 CUX1P39880 1505 aa7.73□□□□□ -1.17
CMSS1-209ENST00000497345 GNPATO15228 680 aa7.73□□□□□ -1.17
CMSS1-209ENST00000497345 SLC10A3P09131 477 aa7.73□□□□□ -1.17
CMSS1-209ENST00000497345 KMT5BQ4FZB7 885 aa7.73□□□□□ -1.17
CMSS1-209ENST00000497345 KIF21AQ7Z4S6 1674 aa7.73□□□□□ -1.17
CMSS1-209ENST00000497345 RUSC2Q8N2Y8 1516 aa7.73□□□□□ -1.17
CMSS1-209ENST00000497345 PDS5BQ9NTI5 1447 aa7.72□□□□□ -1.17
CMSS1-209ENST00000497345 GPR37O15354 613 aa7.72□□□□□ -1.17
CMSS1-209ENST00000497345 ACTN4O43707 911 aaKnown RBP7.72□□□□□ -1.17
CMSS1-209ENST00000497345 BLOC1S3Q6QNY0 202 aa7.72□□□□□ -1.17
CMSS1-209ENST00000497345 METTL3Q86U44 580 aaKnown RBP7.72□□□□□ -1.17
CMSS1-209ENST00000497345 VSIG10Q8N0Z9 540 aa7.72□□□□□ -1.17
CMSS1-209ENST00000497345 PRKD2Q9BZL6 878 aa7.72□□□□□ -1.17
CMSS1-209ENST00000497345 CEP164Q9UPV0 1460 aa7.72□□□□□ -1.17
CMSS1-209ENST00000497345 GGCXP38435 758 aa7.71□□□□□ -1.18
CMSS1-209ENST00000497345 TOP2BQ02880 1626 aa7.7□□□□□ -1.18
CMSS1-209ENST00000497345 ERCC6Q03468 1493 aa7.7□□□□□ -1.18
CMSS1-209ENST00000497345 CFHP08603 1231 aa7.7□□□□□ -1.18
CMSS1-209ENST00000497345 TMUB1Q9BVT8 246 aa7.7□□□□□ -1.18
CMSS1-209ENST00000497345 V9GY48 417 aaPredicted RBP7.7□□□□□ -1.18
CMSS1-209ENST00000497345 RSPH4AQ5TD94 716 aa7.69□□□□□ -1.18
CMSS1-209ENST00000497345 BIVM-ERCC5R4GMW8 1640 aa7.69□□□□□ -1.18
CMSS1-209ENST00000497345 DAXXQ9UER7 740 aaPredicted RBP7.68□□□□□ -1.18
CMSS1-209ENST00000497345 FGD5Q6ZNL6 1462 aa7.68□□□□□ -1.18
CMSS1-209ENST00000497345 URB2Q14146 1524 aaKnown RBP7.68□□□□□ -1.18
CMSS1-209ENST00000497345 TOPBP1Q92547 1522 aa7.68□□□□□ -1.18
CMSS1-209ENST00000497345 LAPTM4AQ15012 233 aa7.67□□□□□ -1.18
CMSS1-209ENST00000497345 GPIHBP1Q8IV16 184 aa7.67□□□□□ -1.18
CMSS1-209ENST00000497345 RAD54L2Q9Y4B4 1467 aa7.67□□□□□ -1.18
CMSS1-209ENST00000497345 GFRA3O60609 400 aa7.66□□□□□ -1.18
CMSS1-209ENST00000497345 RANGAP1P46060 587 aaPredicted RBP7.66□□□□□ -1.18
CMSS1-209ENST00000497345 Q6ZNB5 142 aa7.66□□□□□ -1.18
CMSS1-209ENST00000497345 DNMBPQ6XZF7 1577 aa7.66□□□□□ -1.18
CMSS1-209ENST00000497345 TLL1O43897 1013 aa7.65□□□□□ -1.18
CMSS1-209ENST00000497345 NR1I2O75469 434 aa7.65□□□□□ -1.18
CMSS1-209ENST00000497345 CUX2O14529 1486 aa7.64□□□□□ -1.19
CMSS1-209ENST00000497345 MRC2Q9UBG0 1479 aa7.64□□□□□ -1.19
CMSS1-209ENST00000497345 RNF223E7ERA6 249 aa7.64□□□□□ -1.19
CMSS1-209ENST00000497345 UBTFP17480 764 aaKnown RBP7.64□□□□□ -1.19
CMSS1-209ENST00000497345 SCUBE3Q8IX30 993 aa7.64□□□□□ -1.19
CMSS1-209ENST00000497345 NLRP7Q8WX94 980 aa7.64□□□□□ -1.19
CMSS1-209ENST00000497345 PHOX2BQ99453 314 aa7.64□□□□□ -1.19
CMSS1-209ENST00000497345 PUS10Q3MIT2 529 aaKnown RBP7.63□□□□□ -1.19
CMSS1-209ENST00000497345 RDH13Q8NBN7 331 aa7.63□□□□□ -1.19
CMSS1-209ENST00000497345 POLA1P09884 1462 aaPredicted RBP7.62□□□□□ -1.19
CMSS1-209ENST00000497345 DDX11L8A8MPP1 907 aa7.62□□□□□ -1.19
CMSS1-209ENST00000497345 TULP1O00294 542 aaPredicted RBP7.62□□□□□ -1.19
CMSS1-209ENST00000497345 ADH1BP00325 375 aa7.62□□□□□ -1.19
CMSS1-209ENST00000497345 KIF27Q86VH2 1401 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms