RNA–Protein interactions for RNA: ENST00000496684.6

CCT3-215, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-215ENST00000496684 SHPRHQ149N8 1683 aa12.12□□□□□ -0.47
CCT3-215ENST00000496684 ADGRB3O60242 1522 aa12.11□□□□□ -0.47
CCT3-215ENST00000496684 PROSER2Q86WR7 435 aaPredicted RBP12.1□□□□□ -0.47
CCT3-215ENST00000496684 SLC26A8Q96RN1 970 aa12.1□□□□□ -0.47
CCT3-215ENST00000496684 EID1Q9Y6B2 187 aa12.1□□□□□ -0.47
CCT3-215ENST00000496684 AHDC1Q5TGY3 1603 aaPredicted RBP12.08□□□□□ -0.48
CCT3-215ENST00000496684 LMTK2Q8IWU2 1503 aa12.07□□□□□ -0.48
CCT3-215ENST00000496684 DIP2AQ14689 1571 aa12.07□□□□□ -0.48
CCT3-215ENST00000496684 ERBINQ96RT1 1412 aa12.07□□□□□ -0.48
CCT3-215ENST00000496684 MSH6P52701 1360 aa12.06□□□□□ -0.48
CCT3-215ENST00000496684 KIF15Q9NS87 1388 aa12.06□□□□□ -0.48
CCT3-215ENST00000496684 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.06□□□□□ -0.48
CCT3-215ENST00000496684 FGD6Q6ZV73 1430 aa12.06□□□□□ -0.48
CCT3-215ENST00000496684 IDI1Q13907 227 aa12.06□□□□□ -0.48
CCT3-215ENST00000496684 TRIM52Q96A61 297 aa12.06□□□□□ -0.48
CCT3-215ENST00000496684 SLAIN2Q9P270 581 aa12.06□□□□□ -0.48
CCT3-215ENST00000496684 GCC2Q8IWJ2 1684 aa12.06□□□□□ -0.48
CCT3-215ENST00000496684 NOS1P29475 1434 aa12.05□□□□□ -0.48
CCT3-215ENST00000496684 ZFYVE9O95405 1425 aa12.04□□□□□ -0.48
CCT3-215ENST00000496684 MYOM3Q5VTT5 1437 aa12.04□□□□□ -0.48
CCT3-215ENST00000496684 CDK12Q9NYV4 1490 aaPredicted RBP12.03□□□□□ -0.48
CCT3-215ENST00000496684 SPATA31A6Q5VVP1 1343 aa12.03□□□□□ -0.48
CCT3-215ENST00000496684 ABCC5O15440 1437 aa12.03□□□□□ -0.48
CCT3-215ENST00000496684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.491e-10■■□□□ 12.8
CCT3-215ENST00000496684 STAG3Q9UJ98 1225 aa12.02□□□□□ -0.49
CCT3-215ENST00000496684 EP400Q96L91 3159 aa12.02□□□□□ -0.49
CCT3-215ENST00000496684 TMEM131LA2VDJ0 1609 aa12.01□□□□□ -0.49
CCT3-215ENST00000496684 ZNF772Q68DY9 489 aaPredicted RBP12.01□□□□□ -0.49
CCT3-215ENST00000496684 PTPN23Q9H3S7 1636 aa12□□□□□ -0.49
CCT3-215ENST00000496684 DCAF8L1A6NGE4 600 aa12□□□□□ -0.49
CCT3-215ENST00000496684 KANK4Q5T7N3 995 aaPredicted RBP12□□□□□ -0.49
CCT3-215ENST00000496684 PLEKHG1Q9ULL1 1385 aa12□□□□□ -0.49
CCT3-215ENST00000496684 RGS12O14924 1447 aa12□□□□□ -0.49
CCT3-215ENST00000496684 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
CCT3-215ENST00000496684 MEX3CQ5U5Q3 659 aaKnown RBP11.99□□□□□ -0.49
CCT3-215ENST00000496684 RRP7BPQ9NSQ0 103 aa11.99□□□□□ -0.49
CCT3-215ENST00000496684 DAPK1P53355 1430 aa11.98□□□□□ -0.49
CCT3-215ENST00000496684 ADAMTS13Q76LX8 1427 aa11.98□□□□□ -0.49
CCT3-215ENST00000496684 KANK1Q14678 1352 aa11.98□□□□□ -0.49
CCT3-215ENST00000496684 VPS8Q8N3P4 1428 aa11.97□□□□□ -0.49
CCT3-215ENST00000496684 RIMS2Q9UQ26 1411 aa11.97□□□□□ -0.49
CCT3-215ENST00000496684 NCOA3Q9Y6Q9 1424 aa11.97□□□□□ -0.49
CCT3-215ENST00000496684 SLC4A2P04920 1241 aa11.97□□□□□ -0.49
CCT3-215ENST00000496684 RXRBP28702 533 aa11.97□□□□□ -0.49
CCT3-215ENST00000496684 AFF2P51816 1311 aa11.96□□□□□ -0.49
CCT3-215ENST00000496684 ASXL1Q8IXJ9 1541 aa11.96□□□□□ -0.5
CCT3-215ENST00000496684 XRN1Q8IZH2 1706 aaKnown RBP11.94□□□□□ -0.5
CCT3-215ENST00000496684 BRINP3Q76B58 766 aa11.94□□□□□ -0.5
CCT3-215ENST00000496684 BCANQ96GW7 911 aa11.94□□□□□ -0.5
CCT3-215ENST00000496684 RPRD2Q5VT52 1461 aaKnown RBP11.94□□□□□ -0.5
CCT3-215ENST00000496684 PTPRUQ92729 1446 aa11.94□□□□□ -0.5
CCT3-215ENST00000496684 NRXN3Q9Y4C0 1643 aa11.93□□□□□ -0.5
CCT3-215ENST00000496684 UNC13BO14795 1591 aa11.93□□□□□ -0.5
CCT3-215ENST00000496684 NUTM2BA6NNL0 878 aaPredicted RBP11.93□□□□□ -0.5
CCT3-215ENST00000496684 NUTM2EB1AL46 878 aaPredicted RBP11.93□□□□□ -0.5
CCT3-215ENST00000496684 NUTM2AQ8IVF1 878 aaPredicted RBP11.93□□□□□ -0.5
CCT3-215ENST00000496684 SLC52A1Q9NWF4 448 aa11.93□□□□□ -0.5
CCT3-215ENST00000496684 SETD5Q9C0A6 1442 aa11.93□□□□□ -0.5
CCT3-215ENST00000496684 SETBP1Q9Y6X0 1596 aa11.92□□□□□ -0.5
CCT3-215ENST00000496684 E9PCH4 1651 aa11.92□□□□□ -0.5
CCT3-215ENST00000496684 TBX22Q9Y458 520 aa11.92□□□□□ -0.5
CCT3-215ENST00000496684 CADPS2Q86UW7 1296 aa11.91□□□□□ -0.5
CCT3-215ENST00000496684 C19orf44Q9H6X5 657 aa11.91□□□□□ -0.5
CCT3-215ENST00000496684 MST1RQ04912 1400 aa11.91□□□□□ -0.5
CCT3-215ENST00000496684 NALCNQ8IZF0 1738 aa11.91□□□□□ -0.5
CCT3-215ENST00000496684 TRPM2O94759 1503 aa11.91□□□□□ -0.5
CCT3-215ENST00000496684 ADGRL2O95490 1459 aa11.9□□□□□ -0.5
CCT3-215ENST00000496684 DCCP43146 1447 aa11.9□□□□□ -0.5
CCT3-215ENST00000496684 C14orf37Q86TY3 774 aa11.9□□□□□ -0.5
CCT3-215ENST00000496684 CHIC2Q9UKJ5 165 aa11.9□□□□□ -0.5
CCT3-215ENST00000496684 PPP1R15AO75807 674 aaPredicted RBP11.89□□□□□ -0.51
CCT3-215ENST00000496684 ATF3P18847 181 aa11.89□□□□□ -0.51
CCT3-215ENST00000496684 NUTM2DQ5VT03 806 aaPredicted RBP11.89□□□□□ -0.51
CCT3-215ENST00000496684 PNPLA6Q8IY17 1366 aa11.89□□□□□ -0.51
CCT3-215ENST00000496684 PIK3R4Q99570 1358 aa11.89□□□□□ -0.51
CCT3-215ENST00000496684 ANKRD30AQ9BXX3 1397 aa11.89□□□□□ -0.51
CCT3-215ENST00000496684 LAMC1P11047 1609 aa11.88□□□□□ -0.51
CCT3-215ENST00000496684 RBM6P78332 1123 aaKnown RBP11.87□□□□□ -0.51
CCT3-215ENST00000496684 DDX17Q92841 729 aaKnown RBP11.87□□□□□ -0.51
CCT3-215ENST00000496684 C8orf37Q96NL8 207 aa11.87□□□□□ -0.51
CCT3-215ENST00000496684 QTRT2Q9H974 415 aaKnown RBP11.87□□□□□ -0.51
CCT3-215ENST00000496684 MYCNP04198 464 aaPredicted RBP11.86□□□□□ -0.51
CCT3-215ENST00000496684 ATXN8OSP0DMR3 200 aa11.86□□□□□ -0.51
CCT3-215ENST00000496684 AMOTL2Q9Y2J4 779 aa11.85□□□□□ -0.51
CCT3-215ENST00000496684 ATAD2Q6PL18 1390 aa11.84□□□□□ -0.51
CCT3-215ENST00000496684 ANKRD50Q9ULJ7 1429 aa11.84□□□□□ -0.51
CCT3-215ENST00000496684 IQGAP3Q86VI3 1631 aa11.83□□□□□ -0.52
CCT3-215ENST00000496684 ADGRL3Q9HAR2 1447 aa11.83□□□□□ -0.52
CCT3-215ENST00000496684 MARF1Q9Y4F3 1742 aaKnown RBP11.83□□□□□ -0.52
CCT3-215ENST00000496684 COL22A1Q8NFW1 1626 aaPredicted RBP11.82□□□□□ -0.52
CCT3-215ENST00000496684 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCT3-215ENST00000496684 ATRNO75882 1429 aa11.81□□□□□ -0.52
CCT3-215ENST00000496684 CHGAP10645 457 aaKnown RBP11.81□□□□□ -0.52
CCT3-215ENST00000496684 HDGFP51858 240 aaKnown RBP11.81□□□□□ -0.52
CCT3-215ENST00000496684 LRRC59Q96AG4 307 aaKnown RBP11.81□□□□□ -0.52
CCT3-215ENST00000496684 METP08581 1390 aa11.8□□□□□ -0.52
CCT3-215ENST00000496684 ADAMTS2O95450 1211 aa11.8□□□□□ -0.52
CCT3-215ENST00000496684 BRWD3Q6RI45 1802 aa11.79□□□□□ -0.52
CCT3-215ENST00000496684 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
CCT3-215ENST00000496684 NGLY1Q96IV0 654 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms