RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 WASHC2CQ9Y4E1 1318 aa15.31■□□□□ 0.04
CDCA7-208ENST00000496441 AMER1Q5JTC6 1135 aaPredicted RBP15.3■□□□□ 0.04
CDCA7-208ENST00000496441 RNF123Q5XPI4 1314 aa15.3■□□□□ 0.04
CDCA7-208ENST00000496441 CDCA8Q53HL2 280 aa15.3■□□□□ 0.04
CDCA7-208ENST00000496441 SCAF11Q99590 1463 aaKnown RBP15.29■□□□□ 0.04
CDCA7-208ENST00000496441 PTPRTO14522 1441 aa15.28■□□□□ 0.04
CDCA7-208ENST00000496441 CD109Q6YHK3 1445 aa15.28■□□□□ 0.04
CDCA7-208ENST00000496441 NPM2Q86SE8 214 aaKnown RBP15.27■□□□□ 0.04
CDCA7-208ENST00000496441 ABCA9Q8IUA7 1624 aa15.27■□□□□ 0.03
CDCA7-208ENST00000496441 CEP152O94986 1710 aa15.27■□□□□ 0.03
CDCA7-208ENST00000496441 NEUROD2Q15784 382 aa15.26■□□□□ 0.03
CDCA7-208ENST00000496441 C20orf194Q5TEA3 1177 aa15.26■□□□□ 0.03
CDCA7-208ENST00000496441 EIF3AQ14152 1382 aaKnown RBP15.26■□□□□ 0.03
CDCA7-208ENST00000496441 NOS1P29475 1434 aa15.26■□□□□ 0.03
CDCA7-208ENST00000496441 TET3O43151 1660 aa15.26■□□□□ 0.03
CDCA7-208ENST00000496441 INO80Q9ULG1 1556 aaPredicted RBP15.25■□□□□ 0.03
CDCA7-208ENST00000496441 CARD14Q9BXL6 1004 aa15.25■□□□□ 0.03
CDCA7-208ENST00000496441 FANCIQ9NVI1 1328 aa15.25■□□□□ 0.03
CDCA7-208ENST00000496441 LAMC1P11047 1609 aa15.25■□□□□ 0.03
CDCA7-208ENST00000496441 RNF17Q9BXT8 1623 aaKnown RBP15.25■□□□□ 0.03
CDCA7-208ENST00000496441 PDE3BQ13370 1112 aa15.24■□□□□ 0.03
CDCA7-208ENST00000496441 CRBNQ96SW2 442 aa15.24■□□□□ 0.03
CDCA7-208ENST00000496441 SLC12A5Q9H2X9 1139 aa15.24■□□□□ 0.03
CDCA7-208ENST00000496441 APAF1O14727 1248 aa15.24■□□□□ 0.03
CDCA7-208ENST00000496441 STK26Q9P289 416 aa15.23■□□□□ 0.03
CDCA7-208ENST00000496441 CYB5RLQ6IPT4 315 aa15.23■□□□□ 0.03
CDCA7-208ENST00000496441 KIDINS220Q9ULH0 1771 aa15.23■□□□□ 0.03
CDCA7-208ENST00000496441 PLEKHH1Q9ULM0 1364 aa15.23■□□□□ 0.03
CDCA7-208ENST00000496441 IQGAP1P46940 1657 aa15.22■□□□□ 0.03
CDCA7-208ENST00000496441 ARAP3Q8WWN8 1544 aa15.22■□□□□ 0.03
CDCA7-208ENST00000496441 DEPDC5O75140 1603 aa15.22■□□□□ 0.03
CDCA7-208ENST00000496441 ZNF518AQ6AHZ1 1483 aa15.21■□□□□ 0.03
CDCA7-208ENST00000496441 CENPJQ9HC77 1338 aaPredicted RBP15.21■□□□□ 0.02
CDCA7-208ENST00000496441 MROH1Q8NDA8 1641 aa15.2■□□□□ 0.02
CDCA7-208ENST00000496441 PPRC1Q5VV67 1664 aaKnown RBP15.2■□□□□ 0.02
CDCA7-208ENST00000496441 KIF1BO60333 1816 aa15.2■□□□□ 0.02
CDCA7-208ENST00000496441 RRP7AQ9Y3A4 280 aaKnown RBP15.2■□□□□ 0.02
CDCA7-208ENST00000496441 BLMP54132 1417 aaPredicted RBP15.19■□□□□ 0.02
CDCA7-208ENST00000496441 SPINK5Q9NQ38 1064 aaPredicted RBP15.19■□□□□ 0.02
CDCA7-208ENST00000496441 NPATQ14207 1427 aa15.19■□□□□ 0.02
CDCA7-208ENST00000496441 GOLGA2Q08379 1002 aa15.19■□□□□ 0.02
CDCA7-208ENST00000496441 STAC3Q96MF2 364 aa15.19■□□□□ 0.02
CDCA7-208ENST00000496441 MROH2AA6NES4 1674 aa15.18■□□□□ 0.02
CDCA7-208ENST00000496441 ASXL1Q8IXJ9 1541 aa15.18■□□□□ 0.02
CDCA7-208ENST00000496441 ABCA6Q8N139 1617 aa15.18■□□□□ 0.02
CDCA7-208ENST00000496441 PAK3O75914 559 aaPredicted RBP15.18■□□□□ 0.02
CDCA7-208ENST00000496441 NBR1Q14596 966 aa15.17■□□□□ 0.02
CDCA7-208ENST00000496441 ERVK-7P63135 1459 aa15.17■□□□□ 0.02
CDCA7-208ENST00000496441 EFCAB6Q5THR3 1501 aa15.17■□□□□ 0.02
CDCA7-208ENST00000496441 MORC1Q86VD1 984 aa15.17■□□□□ 0.02
CDCA7-208ENST00000496441 DUSP27Q5VZP5 1158 aa15.16■□□□□ 0.02
CDCA7-208ENST00000496441 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
CDCA7-208ENST00000496441 MAP3K4Q9Y6R4 1608 aa15.16■□□□□ 0.02
CDCA7-208ENST00000496441 VWDEQ8N2E2 1590 aa15.16■□□□□ 0.02
CDCA7-208ENST00000496441 CABP2Q9NPB3 220 aa15.16■□□□□ 0.02
CDCA7-208ENST00000496441 POGZQ7Z3K3 1410 aa15.15■□□□□ 0.02
CDCA7-208ENST00000496441 ANP32AP39687 249 aaKnown RBP15.15■□□□□ 0.02
CDCA7-208ENST00000496441 KDM5AP29375 1690 aaKnown RBP15.14■□□□□ 0.01
CDCA7-208ENST00000496441 SYNMO15061 1565 aa15.14■□□□□ 0.01
CDCA7-208ENST00000496441 BCAR3O75815 825 aa15.13■□□□□ 0.01
CDCA7-208ENST00000496441 IDI1Q13907 227 aa15.13■□□□□ 0.01
CDCA7-208ENST00000496441 MLECQ14165 292 aa15.13■□□□□ 0.01
CDCA7-208ENST00000496441 MYOM1P52179 1685 aa15.13■□□□□ 0.01
CDCA7-208ENST00000496441 ZMYM4Q5VZL5 1548 aa15.13■□□□□ 0.01
CDCA7-208ENST00000496441 C14orf93Q9H972 538 aaKnown RBP15.13■□□□□ 0.01
CDCA7-208ENST00000496441 NSD3Q9BZ95 1437 aa15.13■□□□□ 0.01
CDCA7-208ENST00000496441 FBXO31Q5XUX0 539 aaPredicted RBP15.12■□□□□ 0.01
CDCA7-208ENST00000496441 NOP58Q9Y2X3 529 aaKnown RBP15.11■□□□□ 0.01
CDCA7-208ENST00000496441 SRPK2P78362 688 aaKnown RBP15.11■□□□□ 0.01
CDCA7-208ENST00000496441 STAG3Q9UJ98 1225 aa15.11■□□□□ 0.01
CDCA7-208ENST00000496441 FRMPD1Q5SYB0 1578 aa15.1■□□□□ 0.01
CDCA7-208ENST00000496441 MTHFSP49914 203 aa15.1■□□□□ 0.01
CDCA7-208ENST00000496441 SLFN5Q08AF3 891 aa15.1■□□□□ 0.01
CDCA7-208ENST00000496441 MYOM2P54296 1465 aa15.09■□□□□ 0.01
CDCA7-208ENST00000496441 MINK1Q8N4C8 1332 aaPredicted RBP15.09■□□□□ 0.01
CDCA7-208ENST00000496441 PDE4AP27815 886 aa15.09■□□□□ 0.01
CDCA7-208ENST00000496441 FRAT1Q92837 279 aaPredicted RBP15.09■□□□□ 0.01
CDCA7-208ENST00000496441 YEATS2Q9ULM3 1422 aa15.09■□□□□ 0.01
CDCA7-208ENST00000496441 VGFO15240 615 aaPredicted RBP15.08■□□□□ 0
CDCA7-208ENST00000496441 CANXP27824 592 aaKnown RBP15.08■□□□□ 0
CDCA7-208ENST00000496441 FAM69CQ0P6D2 419 aa15.08■□□□□ 0
CDCA7-208ENST00000496441 BCL2L13Q9BXK5 485 aa15.08■□□□□ 0
CDCA7-208ENST00000496441 HECW2Q9P2P5 1572 aa15.07■□□□□ 0
CDCA7-208ENST00000496441 PIK3C2GO75747 1445 aa15.07■□□□□ 0
CDCA7-208ENST00000496441 RGS3P49796 1198 aa15.07■□□□□ 0
CDCA7-208ENST00000496441 ZBTB47Q9UFB7 747 aaPredicted RBP15.07■□□□□ 0
CDCA7-208ENST00000496441 ZNF521Q96K83 1311 aa15.07■□□□□ 0
CDCA7-208ENST00000496441 GGNBP2Q9H3C7 697 aa15.06■□□□□ 0
CDCA7-208ENST00000496441 MLH3Q9UHC1 1453 aa15.06■□□□□ 0
CDCA7-208ENST00000496441 SLC24A1O60721 1099 aa15.06■□□□□ 0
CDCA7-208ENST00000496441 IPO9Q96P70 1041 aaKnown RBP15.06■□□□□ 0
CDCA7-208ENST00000496441 ADGRB3O60242 1522 aa15.06■□□□□ 0
CDCA7-208ENST00000496441 TCERG1O14776 1098 aaKnown RBP15.05■□□□□ 0
CDCA7-208ENST00000496441 POGKQ9P215 609 aa15.05■□□□□ 0
CDCA7-208ENST00000496441 U2AF1L5P0DN76 240 aaPredicted RBP15.05■□□□□ -0
CDCA7-208ENST00000496441 U2AF1Q01081 240 aaKnown RBP eCLIP15.05■□□□□ -06e-10■□□□□ 8.8
CDCA7-208ENST00000496441 ABCC3O15438 1527 aa15.04■□□□□ -0
CDCA7-208ENST00000496441 U2SURPO15042 1029 aaKnown RBP15.04■□□□□ -0
CDCA7-208ENST00000496441 KIAA1210Q9ULL0 1709 aa15.04■□□□□ -0
CDCA7-208ENST00000496441 EVC2Q86UK5 1308 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms