RNA–Protein interactions for RNA: ENST00000496269.1

PCOLCE-210, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 995 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-210ENST00000496269 PLEKHG1Q9ULL1 1385 aa33.11■■■□□ 2.89
PCOLCE-210ENST00000496269 SLC4A1APQ9BWU0 796 aaKnown RBP33.1■■■□□ 2.89
PCOLCE-210ENST00000496269 LRRC7Q96NW7 1537 aa33.09■■■□□ 2.89
PCOLCE-210ENST00000496269 XIRP1Q702N8 1843 aaKnown RBP33.09■■■□□ 2.89
PCOLCE-210ENST00000496269 CHGAP10645 457 aaKnown RBP33.08■■■□□ 2.89
PCOLCE-210ENST00000496269 NWD1Q149M9 1564 aa33.08■■■□□ 2.89
PCOLCE-210ENST00000496269 NEXMIFQ5QGS0 1516 aa33.05■■■□□ 2.88
PCOLCE-210ENST00000496269 RAB3GAP2Q9H2M9 1393 aa33.05■■■□□ 2.88
PCOLCE-210ENST00000496269 ALKQ9UM73 1620 aa33.04■■■□□ 2.88
PCOLCE-210ENST00000496269 NRXN3Q9Y4C0 1643 aa33.03■■■□□ 2.88
PCOLCE-210ENST00000496269 ADAMTS13Q76LX8 1427 aa33.02■■■□□ 2.88
PCOLCE-210ENST00000496269 CHD2O14647 1828 aaKnown RBP33.02■■■□□ 2.88
PCOLCE-210ENST00000496269 SLC26A8Q96RN1 970 aa33.01■■■□□ 2.87
PCOLCE-210ENST00000496269 DIP2AQ14689 1571 aa33■■■□□ 2.87
PCOLCE-210ENST00000496269 ABCF1Q8NE71 845 aaKnown RBP eCLIP33■■■□□ 2.87
PCOLCE-210ENST00000496269 MPHOSPH9Q99550 1183 aa33■■■□□ 2.87
PCOLCE-210ENST00000496269 FOXD1Q16676 465 aa32.99■■■□□ 2.87
PCOLCE-210ENST00000496269 HDGFP51858 240 aaKnown RBP32.98■■■□□ 2.87
PCOLCE-210ENST00000496269 SETBP1Q9Y6X0 1596 aa32.97■■■□□ 2.87
PCOLCE-210ENST00000496269 ACIN1Q9UKV3 1341 aaKnown RBP32.97■■■□□ 2.87
PCOLCE-210ENST00000496269 NUTM2DQ5VT03 806 aaPredicted RBP32.96■■■□□ 2.87
PCOLCE-210ENST00000496269 PPP1R15AO75807 674 aaPredicted RBP32.95■■■□□ 2.87
PCOLCE-210ENST00000496269 NKTRP30414 1462 aaKnown RBP32.93■■■□□ 2.86
PCOLCE-210ENST00000496269 PPLO60437 1756 aa32.93■■■□□ 2.86
PCOLCE-210ENST00000496269 KCNA6P17658 529 aa32.92■■■□□ 2.86
PCOLCE-210ENST00000496269 TBX22Q9Y458 520 aa32.91■■■□□ 2.86
PCOLCE-210ENST00000496269 UBAP1LF5GYI3 381 aa32.9■■■□□ 2.86
PCOLCE-210ENST00000496269 SENP3Q9H4L4 574 aaPredicted RBP32.9■■■□□ 2.86
PCOLCE-210ENST00000496269 IFT172Q9UG01 1749 aa32.87■■■□□ 2.85
PCOLCE-210ENST00000496269 SPATA31E1Q6ZUB1 1445 aa32.86■■■□□ 2.85
PCOLCE-210ENST00000496269 SETD1AO15047 1707 aaKnown RBP32.86■■■□□ 2.85
PCOLCE-210ENST00000496269 ZNF326Q5BKZ1 582 aaKnown RBP32.86■■■□□ 2.85
PCOLCE-210ENST00000496269 CCDC144AA2RUR9 1427 aa32.85■■■□□ 2.85
PCOLCE-210ENST00000496269 BCANQ96GW7 911 aa32.85■■■□□ 2.85
PCOLCE-210ENST00000496269 PIK3R4Q99570 1358 aa32.84■■■□□ 2.85
PCOLCE-210ENST00000496269 HRCP23327 699 aa32.84■■■□□ 2.85
PCOLCE-210ENST00000496269 XRN1Q8IZH2 1706 aaKnown RBP32.83■■■□□ 2.85
PCOLCE-210ENST00000496269 PTPRUQ92729 1446 aa32.82■■■□□ 2.84
PCOLCE-210ENST00000496269 TMEM94Q12767 1356 aa32.82■■■□□ 2.84
PCOLCE-210ENST00000496269 RPGRIP1LQ68CZ1 1315 aa32.77■■■□□ 2.84
PCOLCE-210ENST00000496269 TOM1O60784 492 aa32.76■■■□□ 2.83
PCOLCE-210ENST00000496269 METP08581 1390 aa32.73■■■□□ 2.83
PCOLCE-210ENST00000496269 PROSER2Q86WR7 435 aaPredicted RBP32.73■■■□□ 2.83
PCOLCE-210ENST00000496269 ANKRD30BQ9BXX2 1392 aa32.71■■■□□ 2.83
PCOLCE-210ENST00000496269 RBM33Q96EV2 1170 aaKnown RBP32.71■■■□□ 2.83
PCOLCE-210ENST00000496269 VGFO15240 615 aaPredicted RBP32.68■■■□□ 2.82
PCOLCE-210ENST00000496269 NCOA3Q9Y6Q9 1424 aa32.68■■■□□ 2.82
PCOLCE-210ENST00000496269 PIP4K2BP78356 416 aa32.66■■■□□ 2.82
PCOLCE-210ENST00000496269 AMOTL2Q9Y2J4 779 aa32.65■■■□□ 2.82
PCOLCE-210ENST00000496269 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.63■■■□□ 2.81
PCOLCE-210ENST00000496269 PRAG1Q86YV5 1406 aa32.62■■■□□ 2.81
PCOLCE-210ENST00000496269 ADGRF5Q8IZF2 1346 aa32.62■■■□□ 2.81
PCOLCE-210ENST00000496269 RGL3Q3MIN7 710 aa32.61■■■□□ 2.81
PCOLCE-210ENST00000496269 NRXN1Q9ULB1 1477 aa32.6■■■□□ 2.81
PCOLCE-210ENST00000496269 SCAF1Q9H7N4 1312 aaKnown RBP32.59■■■□□ 2.81
PCOLCE-210ENST00000496269 PIK3C2GO75747 1445 aa32.59■■■□□ 2.81
PCOLCE-210ENST00000496269 MSH6P52701 1360 aa32.58■■■□□ 2.81
PCOLCE-210ENST00000496269 ASXL1Q8IXJ9 1541 aa32.58■■■□□ 2.81
PCOLCE-210ENST00000496269 MYOM2P54296 1465 aa32.58■■■□□ 2.81
PCOLCE-210ENST00000496269 HSPA1LP34931 641 aa32.57■■■□□ 2.8
PCOLCE-210ENST00000496269 ROBO1Q9Y6N7 1651 aa32.56■■■□□ 2.8
PCOLCE-210ENST00000496269 FAM135BQ49AJ0 1406 aa32.55■■■□□ 2.8
PCOLCE-210ENST00000496269 NALCNQ8IZF0 1738 aa32.54■■■□□ 2.8
PCOLCE-210ENST00000496269 PTCH1Q13635 1447 aa32.54■■■□□ 2.8
PCOLCE-210ENST00000496269 KNDC1Q76NI1 1749 aa32.48■■■□□ 2.79
PCOLCE-210ENST00000496269 LAMC1P11047 1609 aa32.48■■■□□ 2.79
PCOLCE-210ENST00000496269 DCCP43146 1447 aa32.48■■■□□ 2.79
PCOLCE-210ENST00000496269 ROBO2Q9HCK4 1378 aa32.47■■■□□ 2.79
PCOLCE-210ENST00000496269 C19orf44Q9H6X5 657 aa32.46■■■□□ 2.79
PCOLCE-210ENST00000496269 ADGRL3Q9HAR2 1447 aa32.45■■■□□ 2.79
PCOLCE-210ENST00000496269 TECPR2O15040 1411 aa32.43■■■□□ 2.78
PCOLCE-210ENST00000496269 SLAIN2Q9P270 581 aa32.42■■■□□ 2.78
PCOLCE-210ENST00000496269 DHX57Q6P158 1386 aaKnown RBP32.41■■■□□ 2.78
PCOLCE-210ENST00000496269 C14orf37Q86TY3 774 aa32.39■■■□□ 2.78
PCOLCE-210ENST00000496269 LRPPRCP42704 1394 aaKnown RBP32.38■■■□□ 2.77
PCOLCE-210ENST00000496269 CADPS2Q86UW7 1296 aa32.38■■■□□ 2.77
PCOLCE-210ENST00000496269 MST1RQ04912 1400 aa32.37■■■□□ 2.77
PCOLCE-210ENST00000496269 C14orf93Q9H972 538 aaKnown RBP32.37■■■□□ 2.77
PCOLCE-210ENST00000496269 ADGRB1O14514 1584 aa32.35■■■□□ 2.77
PCOLCE-210ENST00000496269 PHLPP1O60346 1717 aa32.34■■■□□ 2.77
PCOLCE-210ENST00000496269 ABCC11Q96J66 1382 aa32.34■■■□□ 2.77
PCOLCE-210ENST00000496269 YTHDC2Q9H6S0 1430 aaKnown RBP32.34■■■□□ 2.77
PCOLCE-210ENST00000496269 MED1Q15648 1581 aaPredicted RBP32.33■■■□□ 2.77
PCOLCE-210ENST00000496269 ATF3P18847 181 aa32.33■■■□□ 2.77
PCOLCE-210ENST00000496269 TMEM132EQ6IEE7 984 aa32.33■■■□□ 2.77
PCOLCE-210ENST00000496269 COL16A1Q07092 1604 aaPredicted RBP32.33■■■□□ 2.77
PCOLCE-210ENST00000496269 AHDC1Q5TGY3 1603 aaPredicted RBP32.33■■■□□ 2.77
PCOLCE-210ENST00000496269 CFAP70Q5T0N1 1121 aa32.31■■■□□ 2.76
PCOLCE-210ENST00000496269 CDC42BPGQ6DT37 1551 aa32.3■■■□□ 2.76
PCOLCE-210ENST00000496269 TRIM26Q12899 539 aaPredicted RBP32.29■■■□□ 2.76
PCOLCE-210ENST00000496269 NHSL1Q5SYE7 1610 aa32.27■■■□□ 2.76
PCOLCE-210ENST00000496269 DCAF11Q8TEB1 546 aa32.27■■■□□ 2.76
PCOLCE-210ENST00000496269 PLEKHH1Q9ULM0 1364 aa32.25■■■□□ 2.75
PCOLCE-210ENST00000496269 STAC3Q96MF2 364 aa32.25■■■□□ 2.75
PCOLCE-210ENST00000496269 BRINP3Q76B58 766 aa32.24■■■□□ 2.75
PCOLCE-210ENST00000496269 STK26Q9P289 416 aa32.24■■■□□ 2.75
PCOLCE-210ENST00000496269 DLC1Q96QB1 1528 aa32.24■■■□□ 2.75
PCOLCE-210ENST00000496269 C1orf167Q5SNV9 1468 aa32.23■■■□□ 2.75
PCOLCE-210ENST00000496269 DISP3Q9P2K9 1392 aa32.21■■■□□ 2.75
PCOLCE-210ENST00000496269 KDM2AQ9Y2K7 1162 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms