RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 DCAF11Q8TEB1 546 aa28.08■■■□□ 2.09
ATG3-208ENST00000495756 PPLO60437 1756 aa28.08■■■□□ 2.09
ATG3-208ENST00000495756 SLIT1O75093 1534 aa28.08■■■□□ 2.09
ATG3-208ENST00000495756 RIMS2Q9UQ26 1411 aa28.08■■■□□ 2.08
ATG3-208ENST00000495756 ARHGAP23Q9P227 1491 aa28.07■■■□□ 2.08
ATG3-208ENST00000495756 ZFYVE9O95405 1425 aa28.07■■■□□ 2.08
ATG3-208ENST00000495756 STAC3Q96MF2 364 aa28.02■■■□□ 2.08
ATG3-208ENST00000495756 KDM2AQ9Y2K7 1162 aa28.02■■■□□ 2.08
ATG3-208ENST00000495756 MYOM2P54296 1465 aa28.02■■■□□ 2.08
ATG3-208ENST00000495756 HDGFP51858 240 aaKnown RBP28.02■■■□□ 2.08
ATG3-208ENST00000495756 NUTM2DQ5VT03 806 aaPredicted RBP28.02■■■□□ 2.08
ATG3-208ENST00000495756 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.02■■■□□ 2.08
ATG3-208ENST00000495756 VGFO15240 615 aaPredicted RBP28■■■□□ 2.07
ATG3-208ENST00000495756 LTKP29376 864 aa27.99■■■□□ 2.07
ATG3-208ENST00000495756 TXNDC2Q86VQ3 553 aa27.99■■■□□ 2.07
ATG3-208ENST00000495756 EID1Q9Y6B2 187 aa27.99■■■□□ 2.07
ATG3-208ENST00000495756 HSPA2P54652 639 aa27.98■■■□□ 2.07
ATG3-208ENST00000495756 ADGRF5Q8IZF2 1346 aa27.97■■■□□ 2.07
ATG3-208ENST00000495756 PPP1R15AO75807 674 aaPredicted RBP27.97■■■□□ 2.07
ATG3-208ENST00000495756 SCAF11Q99590 1463 aaKnown RBP27.97■■■□□ 2.07
ATG3-208ENST00000495756 ZEB1P37275 1124 aaPredicted RBP27.96■■■□□ 2.07
ATG3-208ENST00000495756 ANKLE2Q86XL3 938 aa27.96■■■□□ 2.07
ATG3-208ENST00000495756 NRXN1Q9ULB1 1477 aa27.96■■■□□ 2.07
ATG3-208ENST00000495756 PRAG1Q86YV5 1406 aa27.94■■■□□ 2.06
ATG3-208ENST00000495756 PIK3C2GO75747 1445 aa27.91■■■□□ 2.06
ATG3-208ENST00000495756 POLR1AO95602 1720 aaPredicted RBP27.91■■■□□ 2.06
ATG3-208ENST00000495756 PLEKHG1Q9ULL1 1385 aa27.9■■■□□ 2.06
ATG3-208ENST00000495756 NBPF8Q3BBV2 869 aa27.89■■■□□ 2.05
ATG3-208ENST00000495756 NCKAP5LQ9HCH0 1330 aa27.88■■■□□ 2.05
ATG3-208ENST00000495756 SENP3Q9H4L4 574 aaPredicted RBP27.87■■■□□ 2.05
ATG3-208ENST00000495756 SETBP1Q9Y6X0 1596 aa27.86■■■□□ 2.05
ATG3-208ENST00000495756 MED14O60244 1454 aa27.86■■■□□ 2.05
ATG3-208ENST00000495756 NRXN3Q9Y4C0 1643 aa27.84■■■□□ 2.05
ATG3-208ENST00000495756 BCANQ96GW7 911 aa27.83■■■□□ 2.05
ATG3-208ENST00000495756 IQGAP1P46940 1657 aa27.83■■■□□ 2.05
ATG3-208ENST00000495756 STRCQ7RTU9 1775 aa27.83■■■□□ 2.05
ATG3-208ENST00000495756 NPHP4O75161 1426 aaPredicted RBP27.83■■■□□ 2.05
ATG3-208ENST00000495756 C14orf93Q9H972 538 aaKnown RBP27.82■■■□□ 2.04
ATG3-208ENST00000495756 CFAP70Q5T0N1 1121 aa27.81■■■□□ 2.04
ATG3-208ENST00000495756 TRPM1Q7Z4N2 1603 aa27.81■■■□□ 2.04
ATG3-208ENST00000495756 KIAA1210Q9ULL0 1709 aa27.81■■■□□ 2.04
ATG3-208ENST00000495756 LAMC1P11047 1609 aa27.8■■■□□ 2.04
ATG3-208ENST00000495756 ALKQ9UM73 1620 aa27.8■■■□□ 2.04
ATG3-208ENST00000495756 ADAMTS13Q76LX8 1427 aa27.8■■■□□ 2.04
ATG3-208ENST00000495756 RALGAPBQ86X10 1494 aa27.78■■■□□ 2.04
ATG3-208ENST00000495756 SETD1AO15047 1707 aaKnown RBP27.77■■■□□ 2.04
ATG3-208ENST00000495756 SLC26A8Q96RN1 970 aa27.76■■■□□ 2.04
ATG3-208ENST00000495756 DIP2AQ14689 1571 aa27.75■■■□□ 2.03
ATG3-208ENST00000495756 NBPF1Q3BBV0 1214 aa27.75■■■□□ 2.03
ATG3-208ENST00000495756 TBX22Q9Y458 520 aa27.74■■■□□ 2.03
ATG3-208ENST00000495756 ROCK2O75116 1388 aaKnown RBP27.73■■■□□ 2.03
ATG3-208ENST00000495756 ADGRB1O14514 1584 aa27.71■■■□□ 2.03
ATG3-208ENST00000495756 ASXL1Q8IXJ9 1541 aa27.71■■■□□ 2.03
ATG3-208ENST00000495756 METP08581 1390 aa27.7■■■□□ 2.03
ATG3-208ENST00000495756 TMEM132EQ6IEE7 984 aa27.7■■■□□ 2.02
ATG3-208ENST00000495756 GPRASP1Q5JY77 1395 aa27.69■■■□□ 2.02
ATG3-208ENST00000495756 DMRT2Q9Y5R5 561 aa27.67■■■□□ 2.02
ATG3-208ENST00000495756 CARD11Q9BXL7 1154 aa27.65■■■□□ 2.02
ATG3-208ENST00000495756 PIK3R4Q99570 1358 aa27.65■■■□□ 2.02
ATG3-208ENST00000495756 YTHDC2Q9H6S0 1430 aaKnown RBP27.63■■■□□ 2.01
ATG3-208ENST00000495756 LRPPRCP42704 1394 aaKnown RBP27.61■■■□□ 2.01
ATG3-208ENST00000495756 PTPRUQ92729 1446 aa27.6■■■□□ 2.01
ATG3-208ENST00000495756 STK26Q9P289 416 aa27.59■■■□□ 2.01
ATG3-208ENST00000495756 CHD2O14647 1828 aaKnown RBP27.59■■■□□ 2.01
ATG3-208ENST00000495756 ABCC11Q96J66 1382 aa27.57■■■□□ 2
ATG3-208ENST00000495756 AMOTL2Q9Y2J4 779 aa27.57■■■□□ 2
ATG3-208ENST00000495756 TRAK1Q9UPV9 953 aa27.56■■■□□ 2
ATG3-208ENST00000495756 XRN1Q8IZH2 1706 aaKnown RBP27.56■■■□□ 2
ATG3-208ENST00000495756 TECPR2O15040 1411 aa27.55■■■□□ 2
ATG3-208ENST00000495756 KNDC1Q76NI1 1749 aa27.54■■■□□ 2
ATG3-208ENST00000495756 KCNA6P17658 529 aa27.54■■■□□ 2
ATG3-208ENST00000495756 USP47Q96K76 1375 aa27.53■■■□□ 2
ATG3-208ENST00000495756 NWD1Q149M9 1564 aa27.53■■■□□ 2
ATG3-208ENST00000495756 DLC1Q96QB1 1528 aa27.52■■■□□ 2
ATG3-208ENST00000495756 ARHGEF28Q8N1W1 1705 aaKnown RBP27.51■■□□□ 1.99
ATG3-208ENST00000495756 CPS1P31327 1500 aa27.51■■□□□ 1.99
ATG3-208ENST00000495756 EIF3AQ14152 1382 aaKnown RBP27.49■■□□□ 1.99
ATG3-208ENST00000495756 EIF4G2P78344 907 aaKnown RBP eCLIP27.49■■□□□ 1.99
ATG3-208ENST00000495756 PTCH1Q13635 1447 aa27.49■■□□□ 1.99
ATG3-208ENST00000495756 ROBO2Q9HCK4 1378 aa27.48■■□□□ 1.99
ATG3-208ENST00000495756 STRCP1A6NGW2 1772 aa27.48■■□□□ 1.99
ATG3-208ENST00000495756 SIRT1Q96EB6 747 aa27.48■■□□□ 1.99
ATG3-208ENST00000495756 ZNF335Q9H4Z2 1342 aaPredicted RBP27.47■■□□□ 1.99
ATG3-208ENST00000495756 FAM135BQ49AJ0 1406 aa27.46■■□□□ 1.99
ATG3-208ENST00000495756 NKTRP30414 1462 aaKnown RBP27.46■■□□□ 1.99
ATG3-208ENST00000495756 PRAM1Q96QH2 718 aa27.45■■□□□ 1.99
ATG3-208ENST00000495756 HSPA5P11021 654 aaKnown RBP27.44■■□□□ 1.98
ATG3-208ENST00000495756 ST20-MTHFSA0A0A6YYL1 179 aa27.44■■□□□ 1.98
ATG3-208ENST00000495756 CENPJQ9HC77 1338 aaPredicted RBP27.43■■□□□ 1.98
ATG3-208ENST00000495756 WAPLQ7Z5K2 1190 aa27.43■■□□□ 1.98
ATG3-208ENST00000495756 POGKQ9P215 609 aa27.43■■□□□ 1.98
ATG3-208ENST00000495756 PLEKHH1Q9ULM0 1364 aa27.42■■□□□ 1.98
ATG3-208ENST00000495756 SAFB2Q14151 953 aaKnown RBP eCLIP27.39■■□□□ 1.98
ATG3-208ENST00000495756 QRICH2Q9H0J4 1663 aa27.39■■□□□ 1.98
ATG3-208ENST00000495756 PROSER2Q86WR7 435 aaPredicted RBP27.38■■□□□ 1.97
ATG3-208ENST00000495756 HIRIP3Q9BW71 556 aaPredicted RBP27.38■■□□□ 1.97
ATG3-208ENST00000495756 TESK2Q96S53 571 aa27.36■■□□□ 1.97
ATG3-208ENST00000495756 SBNO2Q9Y2G9 1366 aa27.35■■□□□ 1.97
ATG3-208ENST00000495756 RBM33Q96EV2 1170 aaKnown RBP27.34■■□□□ 1.97
ATG3-208ENST00000495756 LTBP4Q8N2S1 1624 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms