RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 KIF1BO60333 1816 aa20.59■□□□□ 0.89
CALD1-222ENST00000495522 INSRP06213 1382 aa20.59■□□□□ 0.89
CALD1-222ENST00000495522 ZMYM4Q5VZL5 1548 aa20.58■□□□□ 0.89
CALD1-222ENST00000495522 PPRC1Q5VV67 1664 aaKnown RBP20.58■□□□□ 0.89
CALD1-222ENST00000495522 CD109Q6YHK3 1445 aa20.58■□□□□ 0.89
CALD1-222ENST00000495522 MAP3K4Q9Y6R4 1608 aa20.58■□□□□ 0.88
CALD1-222ENST00000495522 SYNMO15061 1565 aa20.58■□□□□ 0.88
CALD1-222ENST00000495522 SENP3-EIF4A1A0A087X0R7 540 aa20.58■□□□□ 0.88
CALD1-222ENST00000495522 UGGT1Q9NYU2 1555 aa20.57■□□□□ 0.88
CALD1-222ENST00000495522 POGZQ7Z3K3 1410 aa20.57■□□□□ 0.88
CALD1-222ENST00000495522 B4GALNT3Q6L9W6 998 aa20.57■□□□□ 0.88
CALD1-222ENST00000495522 MLH3Q9UHC1 1453 aa20.54■□□□□ 0.88
CALD1-222ENST00000495522 IFT172Q9UG01 1749 aa20.54■□□□□ 0.88
CALD1-222ENST00000495522 ABCA6Q8N139 1617 aa20.54■□□□□ 0.88
CALD1-222ENST00000495522 PDE3BQ13370 1112 aa20.53■□□□□ 0.88
CALD1-222ENST00000495522 KNSTRNQ9Y448 316 aa20.53■□□□□ 0.88
CALD1-222ENST00000495522 HECW2Q9P2P5 1572 aa20.52■□□□□ 0.88
CALD1-222ENST00000495522 BLMP54132 1417 aaPredicted RBP20.52■□□□□ 0.88
CALD1-222ENST00000495522 MROH2AA6NES4 1674 aa20.51■□□□□ 0.87
CALD1-222ENST00000495522 FRMPD1Q5SYB0 1578 aa20.51■□□□□ 0.87
CALD1-222ENST00000495522 SLC24A1O60721 1099 aa20.51■□□□□ 0.87
CALD1-222ENST00000495522 KDM5AP29375 1690 aaKnown RBP20.5■□□□□ 0.87
CALD1-222ENST00000495522 NRXN1Q9ULB1 1477 aa20.5■□□□□ 0.87
CALD1-222ENST00000495522 MYOM1P52179 1685 aa20.49■□□□□ 0.87
CALD1-222ENST00000495522 ADGRF5Q8IZF2 1346 aa20.49■□□□□ 0.87
CALD1-222ENST00000495522 ADGRB3O60242 1522 aa20.49■□□□□ 0.87
CALD1-222ENST00000495522 CFAP70Q5T0N1 1121 aa20.49■□□□□ 0.87
CALD1-222ENST00000495522 ASXL1Q8IXJ9 1541 aa20.48■□□□□ 0.87
CALD1-222ENST00000495522 AMER1Q5JTC6 1135 aaPredicted RBP20.48■□□□□ 0.87
CALD1-222ENST00000495522 SALL2Q9Y467 1007 aaPredicted RBP20.46■□□□□ 0.87
CALD1-222ENST00000495522 NEO1Q92859 1461 aa20.46■□□□□ 0.87
CALD1-222ENST00000495522 NPATQ14207 1427 aa20.46■□□□□ 0.87
CALD1-222ENST00000495522 NPC1L1Q9UHC9 1359 aa20.45■□□□□ 0.87
CALD1-222ENST00000495522 PPP2R1AP30153 589 aa20.45■□□□□ 0.86
CALD1-222ENST00000495522 GLI2P10070 1586 aa20.44■□□□□ 0.86
CALD1-222ENST00000495522 ERVK-7P63135 1459 aa20.44■□□□□ 0.86
CALD1-222ENST00000495522 RRP1P56182 461 aaKnown RBP20.44■□□□□ 0.86
CALD1-222ENST00000495522 CCDC136Q96JN2 1154 aa20.44■□□□□ 0.86
CALD1-222ENST00000495522 RCAN3Q9UKA8 241 aa20.44■□□□□ 0.86
CALD1-222ENST00000495522 MYO3AQ8NEV4 1616 aa20.43■□□□□ 0.86
CALD1-222ENST00000495522 NOS1P29475 1434 aa20.43■□□□□ 0.86
CALD1-222ENST00000495522 ANP32EQ9BTT0 268 aa20.43■□□□□ 0.86
CALD1-222ENST00000495522 DIP2BQ9P265 1576 aa20.43■□□□□ 0.86
CALD1-222ENST00000495522 SETBP1Q9Y6X0 1596 aa20.43■□□□□ 0.86
CALD1-222ENST00000495522 GGT6Q6P531 493 aa20.42■□□□□ 0.86
CALD1-222ENST00000495522 ABCC3O15438 1527 aa20.42■□□□□ 0.86
CALD1-222ENST00000495522 PRKCSHP14314 528 aaPredicted RBP20.42■□□□□ 0.86
CALD1-222ENST00000495522 FAM69CQ0P6D2 419 aa20.42■□□□□ 0.86
CALD1-222ENST00000495522 DNAJC5Q9H3Z4 198 aa20.42■□□□□ 0.86
CALD1-222ENST00000495522 FANCIQ9NVI1 1328 aa20.41■□□□□ 0.86
CALD1-222ENST00000495522 PIK3C2GO75747 1445 aa20.41■□□□□ 0.86
CALD1-222ENST00000495522 SBNO2Q9Y2G9 1366 aa20.41■□□□□ 0.86
CALD1-222ENST00000495522 PPLO60437 1756 aa20.41■□□□□ 0.86
CALD1-222ENST00000495522 CHGAP10645 457 aaKnown RBP20.4■□□□□ 0.86
CALD1-222ENST00000495522 ADAMTS8Q9UP79 889 aa20.39■□□□□ 0.85
CALD1-222ENST00000495522 WDR43Q15061 677 aaKnown RBP eCLIP20.38■□□□□ 0.85
CALD1-222ENST00000495522 CDCA7LQ96GN5 454 aa20.38■□□□□ 0.85
CALD1-222ENST00000495522 CAMSAP1Q5T5Y3 1602 aa20.38■□□□□ 0.85
CALD1-222ENST00000495522 RPGRIP1LQ68CZ1 1315 aa20.37■□□□□ 0.85
CALD1-222ENST00000495522 CFAP65Q6ZU64 1925 aaKnown RBP20.37■□□□□ 0.85
CALD1-222ENST00000495522 DIP2CQ9Y2E4 1556 aa20.36■□□□□ 0.85
CALD1-222ENST00000495522 RAPGEF3O95398 923 aa20.35■□□□□ 0.85
CALD1-222ENST00000495522 C14orf93Q9H972 538 aaKnown RBP20.35■□□□□ 0.85
CALD1-222ENST00000495522 CENPJQ9HC77 1338 aaPredicted RBP20.35■□□□□ 0.85
CALD1-222ENST00000495522 KIF13AQ9H1H9 1805 aa20.34■□□□□ 0.85
CALD1-222ENST00000495522 TSPOAP1O95153 1857 aa20.33■□□□□ 0.85
CALD1-222ENST00000495522 ADGRB1O14514 1584 aa20.32■□□□□ 0.84
CALD1-222ENST00000495522 ERICH6Q7L0X2 663 aa20.32■□□□□ 0.84
CALD1-222ENST00000495522 RICTORQ6R327 1708 aa20.32■□□□□ 0.84
CALD1-222ENST00000495522 SIGLEC1Q9BZZ2 1709 aa20.32■□□□□ 0.84
CALD1-222ENST00000495522 ZC3H13Q5T200 1668 aaKnown RBP20.32■□□□□ 0.84
CALD1-222ENST00000495522 PIK3C2BO00750 1634 aa20.32■□□□□ 0.84
CALD1-222ENST00000495522 EXOC6Q8TAG9 804 aa20.3■□□□□ 0.84
CALD1-222ENST00000495522 QRICH2Q9H0J4 1663 aa20.3■□□□□ 0.84
CALD1-222ENST00000495522 ARHGAP31Q2M1Z3 1444 aa20.29■□□□□ 0.84
CALD1-222ENST00000495522 CARD14Q9BXL6 1004 aa20.29■□□□□ 0.84
CALD1-222ENST00000495522 TRAK1Q9UPV9 953 aa20.29■□□□□ 0.84
CALD1-222ENST00000495522 PLEKHH1Q9ULM0 1364 aa20.28■□□□□ 0.84
CALD1-222ENST00000495522 MSH5O43196 834 aa20.27■□□□□ 0.83
CALD1-222ENST00000495522 ZNF521Q96K83 1311 aa20.26■□□□□ 0.83
CALD1-222ENST00000495522 NEXMIFQ5QGS0 1516 aa20.25■□□□□ 0.83
CALD1-222ENST00000495522 VGFO15240 615 aaPredicted RBP20.24■□□□□ 0.83
CALD1-222ENST00000495522 TMEM132EQ6IEE7 984 aa20.24■□□□□ 0.83
CALD1-222ENST00000495522 YEATS2Q9ULM3 1422 aa20.23■□□□□ 0.83
CALD1-222ENST00000495522 GOLGA2Q08379 1002 aa20.22■□□□□ 0.83
CALD1-222ENST00000495522 NSD3Q9BZ95 1437 aa20.21■□□□□ 0.83
CALD1-222ENST00000495522 DUSP27Q5VZP5 1158 aa20.21■□□□□ 0.83
CALD1-222ENST00000495522 PLIN1O60240 522 aa20.19■□□□□ 0.82
CALD1-222ENST00000495522 SLC52A1Q9NWF4 448 aa20.19■□□□□ 0.82
CALD1-222ENST00000495522 ARHGEF28Q8N1W1 1705 aaKnown RBP20.19■□□□□ 0.82
CALD1-222ENST00000495522 POLR3AO14802 1390 aaPredicted RBP20.19■□□□□ 0.82
CALD1-222ENST00000495522 CCDC146Q8IYE0 955 aa20.18■□□□□ 0.82
CALD1-222ENST00000495522 PUS7Q96PZ0 661 aaKnown RBP20.18■□□□□ 0.82
CALD1-222ENST00000495522 ZFYVE9O95405 1425 aa20.18■□□□□ 0.82
CALD1-222ENST00000495522 USP32Q8NFA0 1604 aa20.18■□□□□ 0.82
CALD1-222ENST00000495522 IDI1Q13907 227 aa20.18■□□□□ 0.82
CALD1-222ENST00000495522 SLC12A5Q9H2X9 1139 aa20.18■□□□□ 0.82
CALD1-222ENST00000495522 NUTM2DQ5VT03 806 aaPredicted RBP20.17■□□□□ 0.82
CALD1-222ENST00000495522 NGEFQ8N5V2 710 aa20.17■□□□□ 0.82
CALD1-222ENST00000495522 EVC2Q86UK5 1308 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms