RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 TSKSQ9UJT2 592 aa6.39□□□□□ -1.39
LRIF1-203ENST00000494675 ARHGEF1Q92888 912 aaKnown RBP6.38□□□□□ -1.39
LRIF1-203ENST00000494675 GGCXP38435 758 aa6.38□□□□□ -1.39
LRIF1-203ENST00000494675 ZNF516Q92618 1163 aa6.38□□□□□ -1.39
LRIF1-203ENST00000494675 PNMA3Q9UL41 463 aa6.38□□□□□ -1.39
LRIF1-203ENST00000494675 TRIM67Q6ZTA4 783 aa6.37□□□□□ -1.39
LRIF1-203ENST00000494675 SAMD7Q7Z3H4 446 aa6.37□□□□□ -1.39
LRIF1-203ENST00000494675 P3H3Q8IVL6 736 aa6.37□□□□□ -1.39
LRIF1-203ENST00000494675 TATDN2Q93075 761 aa6.37□□□□□ -1.39
LRIF1-203ENST00000494675 KCTD17Q8N5Z5 321 aa6.37□□□□□ -1.39
LRIF1-203ENST00000494675 OSBPP22059 807 aa6.36□□□□□ -1.39
LRIF1-203ENST00000494675 SMAPO00193 183 aa6.35□□□□□ -1.39
LRIF1-203ENST00000494675 KCNV2Q8TDN2 545 aa6.35□□□□□ -1.39
LRIF1-203ENST00000494675 SLC4A3P48751 1232 aa6.35□□□□□ -1.39
LRIF1-203ENST00000494675 NECTIN2Q92692 538 aa6.35□□□□□ -1.39
LRIF1-203ENST00000494675 TMUB1Q9BVT8 246 aa6.35□□□□□ -1.39
LRIF1-203ENST00000494675 RBM27Q9P2N5 1060 aaKnown RBP6.35□□□□□ -1.39
LRIF1-203ENST00000494675 PRIM1P49642 420 aaKnown RBP6.34□□□□□ -1.39
LRIF1-203ENST00000494675 NKX2-3Q8TAU0 364 aa6.34□□□□□ -1.39
LRIF1-203ENST00000494675 AAASQ9NRG9 546 aa6.34□□□□□ -1.39
LRIF1-203ENST00000494675 FAM198AQ9UFP1 575 aa6.34□□□□□ -1.39
LRIF1-203ENST00000494675 NUDT18Q6ZVK8 323 aa6.33□□□□□ -1.4
LRIF1-203ENST00000494675 LORP23490 312 aaPredicted RBP6.33□□□□□ -1.4
LRIF1-203ENST00000494675 ZSCAN1Q8NBB4 408 aa6.33□□□□□ -1.4
LRIF1-203ENST00000494675 CDHR5Q9HBB8 845 aa6.33□□□□□ -1.4
LRIF1-203ENST00000494675 ST8SIA5O15466 376 aa6.31□□□□□ -1.4
LRIF1-203ENST00000494675 RNF40O75150 1001 aa6.31□□□□□ -1.4
LRIF1-203ENST00000494675 APLP1P51693 650 aa6.31□□□□□ -1.4
LRIF1-203ENST00000494675 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
LRIF1-203ENST00000494675 SLF2Q8IX21 1173 aa6.31□□□□□ -1.4
LRIF1-203ENST00000494675 SLC19A1P41440 591 aa6.3□□□□□ -1.4
LRIF1-203ENST00000494675 PRR20EP86478 221 aa6.3□□□□□ -1.4
LRIF1-203ENST00000494675 PRR20CP86479 221 aa6.3□□□□□ -1.4
LRIF1-203ENST00000494675 PRR20DP86480 221 aa6.3□□□□□ -1.4
LRIF1-203ENST00000494675 PRR20BP86481 221 aa6.3□□□□□ -1.4
LRIF1-203ENST00000494675 PRR20AP86496 221 aa6.3□□□□□ -1.4
LRIF1-203ENST00000494675 LCE3BQ5TA77 95 aa6.3□□□□□ -1.4
LRIF1-203ENST00000494675 PADI6Q6TGC4 694 aa6.3□□□□□ -1.4
LRIF1-203ENST00000494675 TERTO14746 1132 aaKnown RBP6.29□□□□□ -1.4
LRIF1-203ENST00000494675 TTC13Q8NBP0 860 aa6.29□□□□□ -1.4
LRIF1-203ENST00000494675 FAM187AA6NFU0 413 aa6.28□□□□□ -1.4
LRIF1-203ENST00000494675 COPS2P61201 443 aa6.28□□□□□ -1.4
LRIF1-203ENST00000494675 C11orf95C9JLR9 678 aaPredicted RBP6.27□□□□□ -1.41
LRIF1-203ENST00000494675 C3orf80F5H4A9 247 aa6.27□□□□□ -1.41
LRIF1-203ENST00000494675 TPRNQ4KMQ1 711 aa6.27□□□□□ -1.41
LRIF1-203ENST00000494675 SWT1Q5T5J6 900 aaKnown RBP6.27□□□□□ -1.41
LRIF1-203ENST00000494675 ZPR1O75312 459 aa6.27□□□□□ -1.41
LRIF1-203ENST00000494675 PRKCSHP14314 528 aaPredicted RBP6.27□□□□□ -1.41
LRIF1-203ENST00000494675 MLLT3P42568 568 aaPredicted RBP6.27□□□□□ -1.41
LRIF1-203ENST00000494675 ZNF598Q86UK7 904 aaKnown RBP6.27□□□□□ -1.41
LRIF1-203ENST00000494675 PRR14Q9BWN1 585 aa6.27□□□□□ -1.41
LRIF1-203ENST00000494675 NPDC1Q9NQX5 325 aaPredicted RBP6.27□□□□□ -1.41
LRIF1-203ENST00000494675 KCNMA1Q12791 1236 aa6.26□□□□□ -1.41
LRIF1-203ENST00000494675 SPRYD7Q5W111 196 aa6.26□□□□□ -1.41
LRIF1-203ENST00000494675 NUTM2FA1L443 756 aa6.25□□□□□ -1.41
LRIF1-203ENST00000494675 SEMA3EO15041 775 aa6.25□□□□□ -1.41
LRIF1-203ENST00000494675 SMYD5Q6GMV2 418 aa6.25□□□□□ -1.41
LRIF1-203ENST00000494675 RBM46Q8TBY0 533 aaKnown RBP6.25□□□□□ -1.41
LRIF1-203ENST00000494675 RNF223E7ERA6 249 aa6.24□□□□□ -1.41
LRIF1-203ENST00000494675 EYA1Q99502 592 aa6.24□□□□□ -1.41
LRIF1-203ENST00000494675 GMPR2Q9P2T1 348 aaKnown RBP6.24□□□□□ -1.41
LRIF1-203ENST00000494675 TESPA1A2RU30 521 aaPredicted RBP6.23□□□□□ -1.41
LRIF1-203ENST00000494675 BTBD11A6QL63 1104 aa6.23□□□□□ -1.41
LRIF1-203ENST00000494675 DNAJB2P25686 324 aa6.23□□□□□ -1.41
LRIF1-203ENST00000494675 EMID1Q96A84 441 aaPredicted RBP6.23□□□□□ -1.41
LRIF1-203ENST00000494675 KRTAP9-9Q9BYP9 154 aa6.23□□□□□ -1.41
LRIF1-203ENST00000494675 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
LRIF1-203ENST00000494675 TULP1O00294 542 aaPredicted RBP6.23□□□□□ -1.41
LRIF1-203ENST00000494675 CRIPAKQ8N1N5 446 aa6.23□□□□□ -1.41
LRIF1-203ENST00000494675 FCHSD2O94868 740 aa6.22□□□□□ -1.41
LRIF1-203ENST00000494675 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
LRIF1-203ENST00000494675 GSK3AP49840 483 aa6.21□□□□□ -1.41
LRIF1-203ENST00000494675 KMT5BQ4FZB7 885 aa6.21□□□□□ -1.41
LRIF1-203ENST00000494675 ZNF697Q5TEC3 545 aa6.21□□□□□ -1.41
LRIF1-203ENST00000494675 GDF9O60383 454 aa6.21□□□□□ -1.42
LRIF1-203ENST00000494675 PTGDRQ13258 359 aa6.21□□□□□ -1.42
LRIF1-203ENST00000494675 ANKLE1Q8NAG6 615 aa6.21□□□□□ -1.42
LRIF1-203ENST00000494675 PCDHB3Q9Y5E6 796 aa6.21□□□□□ -1.42
LRIF1-203ENST00000494675 RSPH4AQ5TD94 716 aa6.19□□□□□ -1.42
LRIF1-203ENST00000494675 LIAT1Q6ZQX7 453 aa6.19□□□□□ -1.42
LRIF1-203ENST00000494675 DACH1Q9UI36 760 aa6.19□□□□□ -1.42
LRIF1-203ENST00000494675 ADGRG1Q9Y653 693 aa6.19□□□□□ -1.42
LRIF1-203ENST00000494675 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.18□□□□□ -1.42
LRIF1-203ENST00000494675 RCCD1A6NED2 376 aa6.18□□□□□ -1.42
LRIF1-203ENST00000494675 TNFRSF10AO00220 468 aa6.18□□□□□ -1.42
LRIF1-203ENST00000494675 OATP04181 439 aa6.18□□□□□ -1.42
LRIF1-203ENST00000494675 TMEM151AQ8N4L1 468 aa6.18□□□□□ -1.42
LRIF1-203ENST00000494675 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.17□□□□□ -1.42
LRIF1-203ENST00000494675 TMEM134Q9H6X4 195 aa6.17□□□□□ -1.42
LRIF1-203ENST00000494675 PPEF1O14829 653 aaPredicted RBP6.17□□□□□ -1.42
LRIF1-203ENST00000494675 LMOD2Q6P5Q4 547 aa6.17□□□□□ -1.42
LRIF1-203ENST00000494675 BLOC1S3Q6QNY0 202 aa6.17□□□□□ -1.42
LRIF1-203ENST00000494675 RBM26Q5T8P6 1007 aaKnown RBP6.16□□□□□ -1.42
LRIF1-203ENST00000494675 ACTN4O43707 911 aaKnown RBP6.15□□□□□ -1.42
LRIF1-203ENST00000494675 KRTAP4-12Q9BQ66 201 aa6.15□□□□□ -1.42
LRIF1-203ENST00000494675 NR1I2O75469 434 aa6.15□□□□□ -1.43
LRIF1-203ENST00000494675 S1PR4O95977 384 aa6.15□□□□□ -1.43
LRIF1-203ENST00000494675 CFHP08603 1231 aa6.14□□□□□ -1.43
LRIF1-203ENST00000494675 GMPRP36959 345 aa6.14□□□□□ -1.43
LRIF1-203ENST00000494675 HIC1Q14526 733 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms