RNA–Protein interactions for RNA: ENST00000494504.5

KATNA1-208, Transcript of katanin catalytic subunit A1, humanhuman

TSL 5

Gene KATNA1, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-208ENST00000494504 TCOF1Q13428 1488 aaKnown RBP12.1□□□□□ -0.47
KATNA1-208ENST00000494504 SPNS2Q8IVW8 549 aa12.1□□□□□ -0.47
KATNA1-208ENST00000494504 NPATQ14207 1427 aa12.1□□□□□ -0.47
KATNA1-208ENST00000494504 PLA2R1Q13018 1463 aa12.09□□□□□ -0.47
KATNA1-208ENST00000494504 CDK13Q14004 1512 aaKnown RBP12.09□□□□□ -0.47
KATNA1-208ENST00000494504 PTPRKQ15262 1439 aa12.09□□□□□ -0.47
KATNA1-208ENST00000494504 SHANK2Q9UPX8 1470 aa12.08□□□□□ -0.47
KATNA1-208ENST00000494504 MMRN1Q13201 1228 aa12.08□□□□□ -0.48
KATNA1-208ENST00000494504 ABCA6Q8N139 1617 aa12.08□□□□□ -0.48
KATNA1-208ENST00000494504 AGLP35573 1532 aa12.07□□□□□ -0.48
KATNA1-208ENST00000494504 CPS1P31327 1500 aa12.06□□□□□ -0.48
KATNA1-208ENST00000494504 EFCAB3Q8N7B9 438 aa12.06□□□□□ -0.48
KATNA1-208ENST00000494504 ARHGAP5Q13017 1502 aa12.06□□□□□ -0.48
KATNA1-208ENST00000494504 KDM5CP41229 1560 aa12.05□□□□□ -0.48
KATNA1-208ENST00000494504 ALKQ9UM73 1620 aa12.05□□□□□ -0.48
KATNA1-208ENST00000494504 FAM205CA6NFA0 338 aa12.05□□□□□ -0.48
KATNA1-208ENST00000494504 HS3ST6Q96QI5 342 aa12.05□□□□□ -0.48
KATNA1-208ENST00000494504 REREQ9P2R6 1566 aa12.05□□□□□ -0.48
KATNA1-208ENST00000494504 CEP170BQ9Y4F5 1589 aaPredicted RBP12.05□□□□□ -0.48
KATNA1-208ENST00000494504 SUPT6HQ7KZ85 1726 aaKnown RBP12.04□□□□□ -0.48
KATNA1-208ENST00000494504 MLH3Q9UHC1 1453 aa12.03□□□□□ -0.48
KATNA1-208ENST00000494504 MYO3AQ8NEV4 1616 aa12.03□□□□□ -0.48
KATNA1-208ENST00000494504 GGT6Q6P531 493 aa12.02□□□□□ -0.49
KATNA1-208ENST00000494504 ZNF710Q8N1W2 664 aa12.02□□□□□ -0.49
KATNA1-208ENST00000494504 SETD1AO15047 1707 aaKnown RBP12.02□□□□□ -0.49
KATNA1-208ENST00000494504 MYO5CQ9NQX4 1742 aa12.01□□□□□ -0.49
KATNA1-208ENST00000494504 RIOK3O14730 519 aaKnown RBP12□□□□□ -0.49
KATNA1-208ENST00000494504 HOXB3P14651 431 aaPredicted RBP12□□□□□ -0.49
KATNA1-208ENST00000494504 DOK7Q18PE1 504 aa12□□□□□ -0.49
KATNA1-208ENST00000494504 UPF1Q92900 1129 aaKnown RBP eCLIP12□□□□□ -0.49
KATNA1-208ENST00000494504 SRCAPQ6ZRS2 3230 aa11.99□□□□□ -0.49
KATNA1-208ENST00000494504 POTEB3A0JP26 581 aa11.99□□□□□ -0.49
KATNA1-208ENST00000494504 POTEBQ6S5H4 581 aa11.99□□□□□ -0.49
KATNA1-208ENST00000494504 ANKLE2Q86XL3 938 aa11.99□□□□□ -0.49
KATNA1-208ENST00000494504 ZNF142P52746 1687 aaPredicted RBP11.99□□□□□ -0.49
KATNA1-208ENST00000494504 KIF14Q15058 1648 aa11.98□□□□□ -0.49
KATNA1-208ENST00000494504 CDK11AQ9UQ88 783 aaPredicted RBP11.98□□□□□ -0.49
KATNA1-208ENST00000494504 CLTCQ00610 1675 aaKnown RBP11.97□□□□□ -0.49
KATNA1-208ENST00000494504 A2ML1A8K2U0 1454 aa11.97□□□□□ -0.49
KATNA1-208ENST00000494504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.97□□□□□ -0.49
KATNA1-208ENST00000494504 MROH2AA6NES4 1674 aa11.97□□□□□ -0.49
KATNA1-208ENST00000494504 VWDEQ8N2E2 1590 aa11.96□□□□□ -0.49
KATNA1-208ENST00000494504 NEURL4Q96JN8 1562 aa11.96□□□□□ -0.49
KATNA1-208ENST00000494504 FBXO31Q5XUX0 539 aaPredicted RBP11.96□□□□□ -0.49
KATNA1-208ENST00000494504 TRIM52Q96A61 297 aa11.96□□□□□ -0.49
KATNA1-208ENST00000494504 KRTAP3-3Q9BYR6 98 aa11.96□□□□□ -0.49
KATNA1-208ENST00000494504 KRTAP3-2Q9BYR7 98 aa11.96□□□□□ -0.49
KATNA1-208ENST00000494504 ZNF777Q9ULD5 760 aaPredicted RBP11.96□□□□□ -0.49
KATNA1-208ENST00000494504 DNMT1P26358 1616 aaKnown RBP11.96□□□□□ -0.5
KATNA1-208ENST00000494504 RIMBP2O15034 1052 aa11.95□□□□□ -0.5
KATNA1-208ENST00000494504 VGFO15240 615 aaPredicted RBP11.95□□□□□ -0.5
KATNA1-208ENST00000494504 SOX12O15370 315 aa11.95□□□□□ -0.5
KATNA1-208ENST00000494504 HOXB1P14653 301 aaPredicted RBP11.95□□□□□ -0.5
KATNA1-208ENST00000494504 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.94□□□□□ -0.5
KATNA1-208ENST00000494504 MICALL2Q8IY33 904 aa11.94□□□□□ -0.5
KATNA1-208ENST00000494504 ZFP91Q96JP5 570 aaPredicted RBP11.94□□□□□ -0.5
KATNA1-208ENST00000494504 LRRC7Q96NW7 1537 aa11.94□□□□□ -0.5
KATNA1-208ENST00000494504 KIDINS220Q9ULH0 1771 aa11.94□□□□□ -0.5
KATNA1-208ENST00000494504 SPAG9O60271 1321 aaKnown RBP11.93□□□□□ -0.5
KATNA1-208ENST00000494504 RNF25Q96BH1 459 aaPredicted RBP11.93□□□□□ -0.5
KATNA1-208ENST00000494504 NPHP4O75161 1426 aaPredicted RBP11.93□□□□□ -0.5
KATNA1-208ENST00000494504 ERBB3P21860 1342 aa11.91□□□□□ -0.5
KATNA1-208ENST00000494504 HNRNPMP52272 730 aaKnown RBP eCLIP11.91□□□□□ -0.5
KATNA1-208ENST00000494504 THEMISQ8N1K5 641 aaPredicted RBP11.91□□□□□ -0.5
KATNA1-208ENST00000494504 TROQ12816 1431 aaPredicted RBP11.91□□□□□ -0.5
KATNA1-208ENST00000494504 POLR1AO95602 1720 aaPredicted RBP11.91□□□□□ -0.5
KATNA1-208ENST00000494504 TNRQ92752 1358 aa11.91□□□□□ -0.5
KATNA1-208ENST00000494504 ABCC1P33527 1531 aa11.91□□□□□ -0.5
KATNA1-208ENST00000494504 CLIP1P30622 1438 aa11.9□□□□□ -0.5
KATNA1-208ENST00000494504 RNF17Q9BXT8 1623 aaKnown RBP11.89□□□□□ -0.51
KATNA1-208ENST00000494504 CDC42BPBQ9Y5S2 1711 aa11.89□□□□□ -0.51
KATNA1-208ENST00000494504 ITSN2Q9NZM3 1697 aa11.87□□□□□ -0.51
KATNA1-208ENST00000494504 STRCP1A6NGW2 1772 aa11.87□□□□□ -0.51
KATNA1-208ENST00000494504 MS4A4AQ96JQ5 239 aa11.87□□□□□ -0.51
KATNA1-208ENST00000494504 PHF8Q9UPP1 1060 aa11.87□□□□□ -0.51
KATNA1-208ENST00000494504 SAMD9LQ8IVG5 1584 aa11.87□□□□□ -0.51
KATNA1-208ENST00000494504 TMEM92Q6UXU6 159 aa11.86□□□□□ -0.51
KATNA1-208ENST00000494504 TAOK2Q9UL54 1235 aa11.86□□□□□ -0.51
KATNA1-208ENST00000494504 A2MP01023 1474 aa11.86□□□□□ -0.51
KATNA1-208ENST00000494504 ZSWIM6Q9HCJ5 1215 aa11.85□□□□□ -0.51
KATNA1-208ENST00000494504 MEX3CQ5U5Q3 659 aaKnown RBP11.84□□□□□ -0.51
KATNA1-208ENST00000494504 FAM135BQ49AJ0 1406 aa11.84□□□□□ -0.51
KATNA1-208ENST00000494504 MED14O60244 1454 aa11.83□□□□□ -0.52
KATNA1-208ENST00000494504 FAM135AQ9P2D6 1515 aa11.83□□□□□ -0.52
KATNA1-208ENST00000494504 RBM33Q96EV2 1170 aaKnown RBP11.83□□□□□ -0.52
KATNA1-208ENST00000494504 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
KATNA1-208ENST00000494504 PREX2Q70Z35 1606 aa11.82□□□□□ -0.52
KATNA1-208ENST00000494504 IQGAP1P46940 1657 aa11.81□□□□□ -0.52
KATNA1-208ENST00000494504 ATP7AQ04656 1500 aa11.81□□□□□ -0.52
KATNA1-208ENST00000494504 SYCP2Q9BX26 1530 aa11.81□□□□□ -0.52
KATNA1-208ENST00000494504 UGGT1Q9NYU2 1555 aa11.81□□□□□ -0.52
KATNA1-208ENST00000494504 NLRP6P59044 892 aa11.81□□□□□ -0.52
KATNA1-208ENST00000494504 SYNMO15061 1565 aa11.8□□□□□ -0.52
KATNA1-208ENST00000494504 FMN1Q68DA7 1419 aa11.8□□□□□ -0.52
KATNA1-208ENST00000494504 MIA2Q96PC5 1412 aa11.8□□□□□ -0.52
KATNA1-208ENST00000494504 RXRBP28702 533 aa11.8□□□□□ -0.52
KATNA1-208ENST00000494504 ZNF772Q68DY9 489 aaPredicted RBP11.8□□□□□ -0.52
KATNA1-208ENST00000494504 BCL11BQ9C0K0 894 aaPredicted RBP11.8□□□□□ -0.52
KATNA1-208ENST00000494504 WASHC2CQ9Y4E1 1318 aa11.8□□□□□ -0.52
KATNA1-208ENST00000494504 PLXNC1O60486 1568 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms