RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 TSPY4P0CV99 314 aa11.08□□□□□ -0.64
FN1-225ENST00000494446 TSPY10P0CW01 314 aa11.08□□□□□ -0.64
FN1-225ENST00000494446 RSPH4AQ5TD94 716 aa11.08□□□□□ -0.64
FN1-225ENST00000494446 BCANQ96GW7 911 aa11.08□□□□□ -0.64
FN1-225ENST00000494446 RGS12O14924 1447 aa11.08□□□□□ -0.64
FN1-225ENST00000494446 EHBP1L1Q8N3D4 1523 aa11.07□□□□□ -0.64
FN1-225ENST00000494446 ARHGEF5Q12774 1597 aa11.07□□□□□ -0.64
FN1-225ENST00000494446 AHDC1Q5TGY3 1603 aaPredicted RBP11.06□□□□□ -0.64
FN1-225ENST00000494446 EFCAB6Q5THR3 1501 aa11.06□□□□□ -0.64
FN1-225ENST00000494446 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.06□□□□□ -0.64
FN1-225ENST00000494446 C14orf37Q86TY3 774 aa11.05□□□□□ -0.64
FN1-225ENST00000494446 QTRT2Q9H974 415 aaKnown RBP11.05□□□□□ -0.64
FN1-225ENST00000494446 MYO5BQ9ULV0 1848 aa11.05□□□□□ -0.64
FN1-225ENST00000494446 RBM6P78332 1123 aaKnown RBP11.04□□□□□ -0.64
FN1-225ENST00000494446 DIP2AQ14689 1571 aa11.03□□□□□ -0.64
FN1-225ENST00000494446 CEP162Q5TB80 1403 aa11.03□□□□□ -0.64
FN1-225ENST00000494446 ATAD2Q6PL18 1390 aa11.03□□□□□ -0.64
FN1-225ENST00000494446 C8orf37Q96NL8 207 aa11.02□□□□□ -0.65
FN1-225ENST00000494446 MAST1Q9Y2H9 1570 aa11.02□□□□□ -0.65
FN1-225ENST00000494446 ARHGAP31Q2M1Z3 1444 aa11.01□□□□□ -0.65
FN1-225ENST00000494446 ATF3P18847 181 aa11.01□□□□□ -0.65
FN1-225ENST00000494446 IDI1Q13907 227 aa11.01□□□□□ -0.65
FN1-225ENST00000494446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11□□□□□ -0.65
FN1-225ENST00000494446 CADPS2Q86UW7 1296 aa10.99□□□□□ -0.65
FN1-225ENST00000494446 NGLY1Q96IV0 654 aa10.99□□□□□ -0.65
FN1-225ENST00000494446 EP400Q96L91 3159 aa10.99□□□□□ -0.65
FN1-225ENST00000494446 ADGRB3O60242 1522 aa10.98□□□□□ -0.65
FN1-225ENST00000494446 DUOX2Q9NRD8 1548 aa10.98□□□□□ -0.65
FN1-225ENST00000494446 BRINP3Q76B58 766 aa10.97□□□□□ -0.65
FN1-225ENST00000494446 C19orf44Q9H6X5 657 aa10.97□□□□□ -0.65
FN1-225ENST00000494446 NCOA3Q9Y6Q9 1424 aa10.97□□□□□ -0.65
FN1-225ENST00000494446 NHSL1Q5SYE7 1610 aa10.97□□□□□ -0.65
FN1-225ENST00000494446 GCC2Q8IWJ2 1684 aa10.95□□□□□ -0.66
FN1-225ENST00000494446 PPP1R15AO75807 674 aaPredicted RBP10.95□□□□□ -0.66
FN1-225ENST00000494446 ASXL1Q8IXJ9 1541 aa10.94□□□□□ -0.66
FN1-225ENST00000494446 SETD5Q9C0A6 1442 aa10.94□□□□□ -0.66
FN1-225ENST00000494446 KANK1Q14678 1352 aa10.94□□□□□ -0.66
FN1-225ENST00000494446 ADAMTS2O95450 1211 aa10.94□□□□□ -0.66
FN1-225ENST00000494446 LRRC59Q96AG4 307 aaKnown RBP10.94□□□□□ -0.66
FN1-225ENST00000494446 PLEKHG1Q9ULL1 1385 aa10.93□□□□□ -0.66
FN1-225ENST00000494446 CCDC125Q86Z20 511 aa10.93□□□□□ -0.66
FN1-225ENST00000494446 LRP5O75197 1615 aa10.93□□□□□ -0.66
FN1-225ENST00000494446 USP21Q9UK80 565 aa10.92□□□□□ -0.66
FN1-225ENST00000494446 TBX22Q9Y458 520 aa10.92□□□□□ -0.66
FN1-225ENST00000494446 PNPLA6Q8IY17 1366 aa10.91□□□□□ -0.66
FN1-225ENST00000494446 DDX17Q92841 729 aaKnown RBP10.91□□□□□ -0.66
FN1-225ENST00000494446 RRP7BPQ9NSQ0 103 aa10.91□□□□□ -0.66
FN1-225ENST00000494446 ZFYVE9O95405 1425 aa10.91□□□□□ -0.66
FN1-225ENST00000494446 RIMS2Q9UQ26 1411 aa10.91□□□□□ -0.66
FN1-225ENST00000494446 KIF15Q9NS87 1388 aa10.9□□□□□ -0.66
FN1-225ENST00000494446 CROCC2H7BZ55 1655 aa10.9□□□□□ -0.66
FN1-225ENST00000494446 DCAF8L1A6NGE4 600 aa10.9□□□□□ -0.66
FN1-225ENST00000494446 HDGFP51858 240 aaKnown RBP10.9□□□□□ -0.66
FN1-225ENST00000494446 TRPC5Q9UL62 973 aaPredicted RBP10.9□□□□□ -0.66
FN1-225ENST00000494446 ERBINQ96RT1 1412 aa10.9□□□□□ -0.66
FN1-225ENST00000494446 SLC52A1Q9NWF4 448 aa10.89□□□□□ -0.67
FN1-225ENST00000494446 NOS1P29475 1434 aa10.89□□□□□ -0.67
FN1-225ENST00000494446 BRWD3Q6RI45 1802 aa10.88□□□□□ -0.67
FN1-225ENST00000494446 TMEM131LA2VDJ0 1609 aa10.88□□□□□ -0.67
FN1-225ENST00000494446 LMTK2Q8IWU2 1503 aa10.88□□□□□ -0.67
FN1-225ENST00000494446 MARF1Q9Y4F3 1742 aaKnown RBP10.87□□□□□ -0.67
FN1-225ENST00000494446 MST1RQ04912 1400 aa10.87□□□□□ -0.67
FN1-225ENST00000494446 AMOTL2Q9Y2J4 779 aa10.87□□□□□ -0.67
FN1-225ENST00000494446 ATRNO75882 1429 aa10.86□□□□□ -0.67
FN1-225ENST00000494446 DCCP43146 1447 aa10.86□□□□□ -0.67
FN1-225ENST00000494446 ADAMTS13Q76LX8 1427 aa10.86□□□□□ -0.67
FN1-225ENST00000494446 TRPM2O94759 1503 aa10.86□□□□□ -0.67
FN1-225ENST00000494446 CHGAP10645 457 aaKnown RBP10.86□□□□□ -0.67
FN1-225ENST00000494446 PIK3R4Q99570 1358 aa10.86□□□□□ -0.67
FN1-225ENST00000494446 MYOM3Q5VTT5 1437 aa10.85□□□□□ -0.67
FN1-225ENST00000494446 DEFB132Q7Z7B7 95 aa10.85□□□□□ -0.67
FN1-225ENST00000494446 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.85□□□□□ -0.67
FN1-225ENST00000494446 FNBP4Q8N3X1 1017 aaPredicted RBP10.84□□□□□ -0.67
FN1-225ENST00000494446 BLMP54132 1417 aaPredicted RBP10.84□□□□□ -0.67
FN1-225ENST00000494446 PTPRUQ92729 1446 aa10.84□□□□□ -0.67
FN1-225ENST00000494446 PSDA5PKW4 1024 aaPredicted RBP10.83□□□□□ -0.68
FN1-225ENST00000494446 SF3B2Q13435 895 aaKnown RBP10.83□□□□□ -0.68
FN1-225ENST00000494446 NALCNQ8IZF0 1738 aa10.83□□□□□ -0.68
FN1-225ENST00000494446 XRN1Q8IZH2 1706 aaKnown RBP10.83□□□□□ -0.68
FN1-225ENST00000494446 PTCH1Q13635 1447 aa10.83□□□□□ -0.68
FN1-225ENST00000494446 UNC13BO14795 1591 aa10.82□□□□□ -0.68
FN1-225ENST00000494446 ABCC5O15440 1437 aa10.81□□□□□ -0.68
FN1-225ENST00000494446 LAMC1P11047 1609 aa10.8□□□□□ -0.68
FN1-225ENST00000494446 COL22A1Q8NFW1 1626 aaPredicted RBP10.8□□□□□ -0.68
FN1-225ENST00000494446 HRCP23327 699 aa10.8□□□□□ -0.68
FN1-225ENST00000494446 GJD4Q96KN9 370 aaPredicted RBP10.8□□□□□ -0.68
FN1-225ENST00000494446 CHIC2Q9UKJ5 165 aa10.8□□□□□ -0.68
FN1-225ENST00000494446 RPRD2Q5VT52 1461 aaKnown RBP10.8□□□□□ -0.68
FN1-225ENST00000494446 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.79□□□□□ -0.68
FN1-225ENST00000494446 YY1P25490 414 aa10.79□□□□□ -0.68
FN1-225ENST00000494446 BCL9LQ86UU0 1499 aa10.79□□□□□ -0.68
FN1-225ENST00000494446 SPHKAPQ2M3C7 1700 aa10.78□□□□□ -0.68
FN1-225ENST00000494446 PTPN23Q9H3S7 1636 aa10.78□□□□□ -0.68
FN1-225ENST00000494446 GLI3P10071 1580 aa10.77□□□□□ -0.68
FN1-225ENST00000494446 NRXN3Q9Y4C0 1643 aa10.77□□□□□ -0.68
FN1-225ENST00000494446 ADGRL3Q9HAR2 1447 aa10.77□□□□□ -0.68
FN1-225ENST00000494446 SOS2Q07890 1332 aaPredicted RBP10.77□□□□□ -0.69
FN1-225ENST00000494446 ANKRD30AQ9BXX3 1397 aa10.77□□□□□ -0.69
FN1-225ENST00000494446 DAPK1P53355 1430 aa10.76□□□□□ -0.69
FN1-225ENST00000494446 C1orf167Q5SNV9 1468 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms