RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 KIF1BO60333 1816 aa22.04■■□□□ 1.12
ATG4B-224ENST00000494132 TRPM2O94759 1503 aa22.03■■□□□ 1.12
ATG4B-224ENST00000494132 SLC4A1APQ9BWU0 796 aaKnown RBP22.03■■□□□ 1.12
ATG4B-224ENST00000494132 BCANQ96GW7 911 aa22.01■■□□□ 1.11
ATG4B-224ENST00000494132 SLC26A8Q96RN1 970 aa22.01■■□□□ 1.11
ATG4B-224ENST00000494132 PPP1R15AO75807 674 aaPredicted RBP22■■□□□ 1.11
ATG4B-224ENST00000494132 FOXD1Q16676 465 aa22■■□□□ 1.11
ATG4B-224ENST00000494132 XIRP1Q702N8 1843 aaKnown RBP22■■□□□ 1.11
ATG4B-224ENST00000494132 SETD5Q9C0A6 1442 aa21.97■■□□□ 1.11
ATG4B-224ENST00000494132 LRRC7Q96NW7 1537 aa21.97■■□□□ 1.11
ATG4B-224ENST00000494132 UBAP1LF5GYI3 381 aa21.96■■□□□ 1.11
ATG4B-224ENST00000494132 PLEKHG1Q9ULL1 1385 aa21.95■■□□□ 1.1
ATG4B-224ENST00000494132 ZNF326Q5BKZ1 582 aaKnown RBP21.94■■□□□ 1.1
ATG4B-224ENST00000494132 CHD2O14647 1828 aaKnown RBP21.94■■□□□ 1.1
ATG4B-224ENST00000494132 RAB3GAP2Q9H2M9 1393 aa21.93■■□□□ 1.1
ATG4B-224ENST00000494132 HDGFP51858 240 aaKnown RBP21.92■■□□□ 1.1
ATG4B-224ENST00000494132 MPHOSPH9Q99550 1183 aa21.92■■□□□ 1.1
ATG4B-224ENST00000494132 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.91■■□□□ 1.1
ATG4B-224ENST00000494132 NEXMIFQ5QGS0 1516 aa21.9■■□□□ 1.1
ATG4B-224ENST00000494132 NRXN3Q9Y4C0 1643 aa21.9■■□□□ 1.1
ATG4B-224ENST00000494132 NWD1Q149M9 1564 aa21.9■■□□□ 1.1
ATG4B-224ENST00000494132 ALKQ9UM73 1620 aa21.89■■□□□ 1.09
ATG4B-224ENST00000494132 ADAMTS13Q76LX8 1427 aa21.89■■□□□ 1.09
ATG4B-224ENST00000494132 SCAF1Q9H7N4 1312 aaKnown RBP21.88■■□□□ 1.09
ATG4B-224ENST00000494132 RBM33Q96EV2 1170 aaKnown RBP21.88■■□□□ 1.09
ATG4B-224ENST00000494132 PIP4K2BP78356 416 aa21.87■■□□□ 1.09
ATG4B-224ENST00000494132 KCNA6P17658 529 aa21.86■■□□□ 1.09
ATG4B-224ENST00000494132 PPLO60437 1756 aa21.86■■□□□ 1.09
ATG4B-224ENST00000494132 DIP2AQ14689 1571 aa21.86■■□□□ 1.09
ATG4B-224ENST00000494132 TMEM94Q12767 1356 aa21.83■■□□□ 1.08
ATG4B-224ENST00000494132 SETBP1Q9Y6X0 1596 aa21.82■■□□□ 1.08
ATG4B-224ENST00000494132 CCDC144AA2RUR9 1427 aa21.82■■□□□ 1.08
ATG4B-224ENST00000494132 TOM1O60784 492 aa21.82■■□□□ 1.08
ATG4B-224ENST00000494132 PROSER2Q86WR7 435 aaPredicted RBP21.82■■□□□ 1.08
ATG4B-224ENST00000494132 TBX22Q9Y458 520 aa21.82■■□□□ 1.08
ATG4B-224ENST00000494132 NKTRP30414 1462 aaKnown RBP21.82■■□□□ 1.08
ATG4B-224ENST00000494132 IFT172Q9UG01 1749 aa21.79■■□□□ 1.08
ATG4B-224ENST00000494132 PTPRUQ92729 1446 aa21.78■■□□□ 1.08
ATG4B-224ENST00000494132 SETD1AO15047 1707 aaKnown RBP21.77■■□□□ 1.08
ATG4B-224ENST00000494132 RGL3Q3MIN7 710 aa21.76■■□□□ 1.07
ATG4B-224ENST00000494132 XRN1Q8IZH2 1706 aaKnown RBP21.75■■□□□ 1.07
ATG4B-224ENST00000494132 ACIN1Q9UKV3 1341 aaKnown RBP21.74■■□□□ 1.07
ATG4B-224ENST00000494132 METP08581 1390 aa21.74■■□□□ 1.07
ATG4B-224ENST00000494132 SPATA31E1Q6ZUB1 1445 aa21.73■■□□□ 1.07
ATG4B-224ENST00000494132 PIK3R4Q99570 1358 aa21.73■■□□□ 1.07
ATG4B-224ENST00000494132 HSPA1LP34931 641 aa21.72■■□□□ 1.07
ATG4B-224ENST00000494132 AMOTL2Q9Y2J4 779 aa21.72■■□□□ 1.07
ATG4B-224ENST00000494132 VGFO15240 615 aaPredicted RBP21.7■■□□□ 1.06
ATG4B-224ENST00000494132 RPGRIP1LQ68CZ1 1315 aa21.7■■□□□ 1.06
ATG4B-224ENST00000494132 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.69■■□□□ 1.06
ATG4B-224ENST00000494132 MSH6P52701 1360 aa21.69■■□□□ 1.06
ATG4B-224ENST00000494132 C14orf37Q86TY3 774 aa21.68■■□□□ 1.06
ATG4B-224ENST00000494132 ROBO1Q9Y6N7 1651 aa21.68■■□□□ 1.06
ATG4B-224ENST00000494132 ADGRF5Q8IZF2 1346 aa21.67■■□□□ 1.06
ATG4B-224ENST00000494132 ANKRD30BQ9BXX2 1392 aa21.65■■□□□ 1.06
ATG4B-224ENST00000494132 HRCP23327 699 aa21.64■■□□□ 1.05
ATG4B-224ENST00000494132 NALCNQ8IZF0 1738 aa21.63■■□□□ 1.05
ATG4B-224ENST00000494132 NCOA3Q9Y6Q9 1424 aa21.59■■□□□ 1.05
ATG4B-224ENST00000494132 ASXL1Q8IXJ9 1541 aa21.59■■□□□ 1.05
ATG4B-224ENST00000494132 PIK3C2GO75747 1445 aa21.58■■□□□ 1.05
ATG4B-224ENST00000494132 FAM135BQ49AJ0 1406 aa21.57■■□□□ 1.04
ATG4B-224ENST00000494132 ROBO2Q9HCK4 1378 aa21.57■■□□□ 1.04
ATG4B-224ENST00000494132 PHLPP1O60346 1717 aa21.56■■□□□ 1.04
ATG4B-224ENST00000494132 C19orf44Q9H6X5 657 aa21.56■■□□□ 1.04
ATG4B-224ENST00000494132 SLAIN2Q9P270 581 aa21.56■■□□□ 1.04
ATG4B-224ENST00000494132 DISP3Q9P2K9 1392 aa21.56■■□□□ 1.04
ATG4B-224ENST00000494132 ATF3P18847 181 aa21.55■■□□□ 1.04
ATG4B-224ENST00000494132 MYOM2P54296 1465 aa21.55■■□□□ 1.04
ATG4B-224ENST00000494132 TMEM132EQ6IEE7 984 aa21.54■■□□□ 1.04
ATG4B-224ENST00000494132 PTCH1Q13635 1447 aa21.54■■□□□ 1.04
ATG4B-224ENST00000494132 KNDC1Q76NI1 1749 aa21.53■■□□□ 1.04
ATG4B-224ENST00000494132 STK26Q9P289 416 aa21.53■■□□□ 1.04
ATG4B-224ENST00000494132 ADGRL3Q9HAR2 1447 aa21.53■■□□□ 1.04
ATG4B-224ENST00000494132 NRXN1Q9ULB1 1477 aa21.52■■□□□ 1.04
ATG4B-224ENST00000494132 LAMC1P11047 1609 aa21.52■■□□□ 1.04
ATG4B-224ENST00000494132 CADPS2Q86UW7 1296 aa21.52■■□□□ 1.04
ATG4B-224ENST00000494132 KDM2AQ9Y2K7 1162 aa21.52■■□□□ 1.04
ATG4B-224ENST00000494132 MED1Q15648 1581 aaPredicted RBP21.52■■□□□ 1.04
ATG4B-224ENST00000494132 CFAP70Q5T0N1 1121 aa21.5■■□□□ 1.03
ATG4B-224ENST00000494132 DCCP43146 1447 aa21.49■■□□□ 1.03
ATG4B-224ENST00000494132 DCAF11Q8TEB1 546 aa21.49■■□□□ 1.03
ATG4B-224ENST00000494132 MST1RQ04912 1400 aa21.48■■□□□ 1.03
ATG4B-224ENST00000494132 PRAG1Q86YV5 1406 aa21.48■■□□□ 1.03
ATG4B-224ENST00000494132 COL16A1Q07092 1604 aaPredicted RBP21.47■■□□□ 1.03
ATG4B-224ENST00000494132 LRPPRCP42704 1394 aaKnown RBP21.47■■□□□ 1.03
ATG4B-224ENST00000494132 YTHDC2Q9H6S0 1430 aaKnown RBP21.46■■□□□ 1.03
ATG4B-224ENST00000494132 C14orf93Q9H972 538 aaKnown RBP21.46■■□□□ 1.03
ATG4B-224ENST00000494132 DHX57Q6P158 1386 aaKnown RBP21.46■■□□□ 1.03
ATG4B-224ENST00000494132 WAPLQ7Z5K2 1190 aa21.45■■□□□ 1.02
ATG4B-224ENST00000494132 PLEKHH1Q9ULM0 1364 aa21.45■■□□□ 1.02
ATG4B-224ENST00000494132 TECPR2O15040 1411 aa21.44■■□□□ 1.02
ATG4B-224ENST00000494132 BRINP3Q76B58 766 aa21.43■■□□□ 1.02
ATG4B-224ENST00000494132 AHDC1Q5TGY3 1603 aaPredicted RBP21.43■■□□□ 1.02
ATG4B-224ENST00000494132 TRIM26Q12899 539 aaPredicted RBP21.42■■□□□ 1.02
ATG4B-224ENST00000494132 NHSL1Q5SYE7 1610 aa21.42■■□□□ 1.02
ATG4B-224ENST00000494132 ABCC11Q96J66 1382 aa21.41■■□□□ 1.02
ATG4B-224ENST00000494132 ADGRB1O14514 1584 aa21.4■■□□□ 1.02
ATG4B-224ENST00000494132 CDC42BPGQ6DT37 1551 aa21.4■■□□□ 1.02
ATG4B-224ENST00000494132 C1orf167Q5SNV9 1468 aa21.39■■□□□ 1.01
ATG4B-224ENST00000494132 RGPD8O14715 1765 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms