RNA–Protein interactions for RNA: ENST00000493622.5

PHGDH-206, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 742 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-206ENST00000493622 ARHGEF40Q8TER5 1519 aa12.54□□□□□ -0.4
PHGDH-206ENST00000493622 MYT1LQ9UL68 1186 aa12.54□□□□□ -0.4
PHGDH-206ENST00000493622 ST20-MTHFSA0A0A6YYL1 179 aa12.53□□□□□ -0.4
PHGDH-206ENST00000493622 FAM69CQ0P6D2 419 aa12.53□□□□□ -0.4
PHGDH-206ENST00000493622 STAC3Q96MF2 364 aa12.53□□□□□ -0.4
PHGDH-206ENST00000493622 SETBP1Q9Y6X0 1596 aa12.52□□□□□ -0.4
PHGDH-206ENST00000493622 MYOM1P52179 1685 aa12.51□□□□□ -0.41
PHGDH-206ENST00000493622 TESK2Q96S53 571 aa12.51□□□□□ -0.41
PHGDH-206ENST00000493622 PRKRIP1Q9H875 184 aaPredicted RBP12.5□□□□□ -0.41
PHGDH-206ENST00000493622 SCAF11Q99590 1463 aaKnown RBP12.5□□□□□ -0.41
PHGDH-206ENST00000493622 NEXMIFQ5QGS0 1516 aa12.5□□□□□ -0.41
PHGDH-206ENST00000493622 CLTCQ00610 1675 aaKnown RBP12.48□□□□□ -0.41
PHGDH-206ENST00000493622 TMEM131LA2VDJ0 1609 aa12.48□□□□□ -0.41
PHGDH-206ENST00000493622 DISP3Q9P2K9 1392 aa12.48□□□□□ -0.41
PHGDH-206ENST00000493622 ADRA2BP18089 450 aa12.48□□□□□ -0.41
PHGDH-206ENST00000493622 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
PHGDH-206ENST00000493622 ADGRB1O14514 1584 aa12.47□□□□□ -0.41
PHGDH-206ENST00000493622 GGT6Q6P531 493 aa12.47□□□□□ -0.41
PHGDH-206ENST00000493622 PIK3C2GO75747 1445 aa12.46□□□□□ -0.41
PHGDH-206ENST00000493622 WASHC2CQ9Y4E1 1318 aa12.45□□□□□ -0.42
PHGDH-206ENST00000493622 CCDC184Q52MB2 194 aa12.45□□□□□ -0.42
PHGDH-206ENST00000493622 KDM5AP29375 1690 aaKnown RBP12.45□□□□□ -0.42
PHGDH-206ENST00000493622 SPATA31D1Q6ZQQ2 1576 aa12.44□□□□□ -0.42
PHGDH-206ENST00000493622 ADGRF5Q8IZF2 1346 aa12.44□□□□□ -0.42
PHGDH-206ENST00000493622 ARHGEF28Q8N1W1 1705 aaKnown RBP12.44□□□□□ -0.42
PHGDH-206ENST00000493622 ERVK-7P63135 1459 aa12.44□□□□□ -0.42
PHGDH-206ENST00000493622 QRICH2Q9H0J4 1663 aa12.43□□□□□ -0.42
PHGDH-206ENST00000493622 ASXL1Q8IXJ9 1541 aa12.42□□□□□ -0.42
PHGDH-206ENST00000493622 RPGRIP1LQ68CZ1 1315 aa12.41□□□□□ -0.42
PHGDH-206ENST00000493622 ZFYVE9O95405 1425 aa12.41□□□□□ -0.42
PHGDH-206ENST00000493622 SETD1AO15047 1707 aaKnown RBP12.4□□□□□ -0.42
PHGDH-206ENST00000493622 KTN1Q86UP2 1357 aaKnown RBP12.4□□□□□ -0.42
PHGDH-206ENST00000493622 SBNO2Q9Y2G9 1366 aa12.4□□□□□ -0.42
PHGDH-206ENST00000493622 PER1O15534 1290 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-206ENST00000493622 PARD3Q8TEW0 1356 aa12.39□□□□□ -0.43
PHGDH-206ENST00000493622 CFAP70Q5T0N1 1121 aa12.38□□□□□ -0.43
PHGDH-206ENST00000493622 EIF3AQ14152 1382 aaKnown RBP12.38□□□□□ -0.43
PHGDH-206ENST00000493622 TMF1P82094 1093 aa12.37□□□□□ -0.43
PHGDH-206ENST00000493622 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
PHGDH-206ENST00000493622 C14orf93Q9H972 538 aaKnown RBP12.36□□□□□ -0.43
PHGDH-206ENST00000493622 IDI1Q13907 227 aa12.35□□□□□ -0.43
PHGDH-206ENST00000493622 SLC52A1Q9NWF4 448 aa12.35□□□□□ -0.43
PHGDH-206ENST00000493622 MRS2Q9HD23 443 aa12.34□□□□□ -0.43
PHGDH-206ENST00000493622 NRXN3Q9Y4C0 1643 aa12.33□□□□□ -0.43
PHGDH-206ENST00000493622 BRD4O60885 1362 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-206ENST00000493622 LRPPRCP42704 1394 aaKnown RBP12.33□□□□□ -0.44
PHGDH-206ENST00000493622 RALBP1Q15311 655 aa12.33□□□□□ -0.44
PHGDH-206ENST00000493622 A2ML1A8K2U0 1454 aa12.32□□□□□ -0.44
PHGDH-206ENST00000493622 MYBBP1AQ9BQG0 1328 aaKnown RBP12.32□□□□□ -0.44
PHGDH-206ENST00000493622 TULP4Q9NRJ4 1543 aa12.32□□□□□ -0.44
PHGDH-206ENST00000493622 USP32Q8NFA0 1604 aa12.31□□□□□ -0.44
PHGDH-206ENST00000493622 CHGAP10645 457 aaKnown RBP12.31□□□□□ -0.44
PHGDH-206ENST00000493622 FBXO31Q5XUX0 539 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-206ENST00000493622 UBR1Q8IWV7 1749 aa12.31□□□□□ -0.44
PHGDH-206ENST00000493622 ALKQ9UM73 1620 aa12.3□□□□□ -0.44
PHGDH-206ENST00000493622 NPC1L1Q9UHC9 1359 aa12.3□□□□□ -0.44
PHGDH-206ENST00000493622 HNRNPUQ00839 825 aaKnown RBP eCLIP12.29□□□□□ -0.44
PHGDH-206ENST00000493622 POTEDQ86YR6 584 aa12.29□□□□□ -0.44
PHGDH-206ENST00000493622 PNISRQ8TF01 805 aaKnown RBP12.29□□□□□ -0.44
PHGDH-206ENST00000493622 PANK3Q9H999 370 aa12.29□□□□□ -0.44
PHGDH-206ENST00000493622 ZBED9Q6R2W3 1325 aa12.29□□□□□ -0.44
PHGDH-206ENST00000493622 KNDC1Q76NI1 1749 aa12.28□□□□□ -0.44
PHGDH-206ENST00000493622 PTPRMP28827 1452 aa12.28□□□□□ -0.44
PHGDH-206ENST00000493622 CDCA8Q53HL2 280 aa12.28□□□□□ -0.44
PHGDH-206ENST00000493622 CENPJQ9HC77 1338 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-206ENST00000493622 C3P01024 1663 aa12.27□□□□□ -0.45
PHGDH-206ENST00000493622 VGFO15240 615 aaPredicted RBP12.27□□□□□ -0.45
PHGDH-206ENST00000493622 FER1L4A9Z1Z3 1794 aa12.27□□□□□ -0.45
PHGDH-206ENST00000493622 DLC1Q96QB1 1528 aa12.27□□□□□ -0.45
PHGDH-206ENST00000493622 SLC24A1O60721 1099 aa12.26□□□□□ -0.45
PHGDH-206ENST00000493622 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-206ENST00000493622 FAM9BQ8IZU0 186 aa12.26□□□□□ -0.45
PHGDH-206ENST00000493622 INSRP06213 1382 aa12.26□□□□□ -0.45
PHGDH-206ENST00000493622 NLRP13Q86W25 1043 aa12.25□□□□□ -0.45
PHGDH-206ENST00000493622 SUPT16HQ9Y5B9 1047 aaKnown RBP12.25□□□□□ -0.45
PHGDH-206ENST00000493622 ZMYM3Q14202 1370 aa12.25□□□□□ -0.45
PHGDH-206ENST00000493622 BLMP54132 1417 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-206ENST00000493622 TMEM132EQ6IEE7 984 aa12.24□□□□□ -0.45
PHGDH-206ENST00000493622 RIMS2Q9UQ26 1411 aa12.24□□□□□ -0.45
PHGDH-206ENST00000493622 YTHDC2Q9H6S0 1430 aaKnown RBP12.23□□□□□ -0.45
PHGDH-206ENST00000493622 ANKRD26Q9UPS8 1709 aa12.23□□□□□ -0.45
PHGDH-206ENST00000493622 NUTM2DQ5VT03 806 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-206ENST00000493622 PUS7Q96PZ0 661 aaKnown RBP12.22□□□□□ -0.45
PHGDH-206ENST00000493622 TRAK1Q9UPV9 953 aa12.22□□□□□ -0.45
PHGDH-206ENST00000493622 MLECQ14165 292 aa12.21□□□□□ -0.45
PHGDH-206ENST00000493622 PIAS4Q8N2W9 510 aaPredicted RBP12.21□□□□□ -0.45
PHGDH-206ENST00000493622 TNRQ92752 1358 aa12.2□□□□□ -0.46
PHGDH-206ENST00000493622 CNGB1Q14028 1251 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-206ENST00000493622 CC2D1BQ5T0F9 858 aaKnown RBP12.2□□□□□ -0.46
PHGDH-206ENST00000493622 TMC1Q8TDI8 760 aa12.2□□□□□ -0.46
PHGDH-206ENST00000493622 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
PHGDH-206ENST00000493622 SHPRHQ149N8 1683 aa12.19□□□□□ -0.46
PHGDH-206ENST00000493622 CARD14Q9BXL6 1004 aa12.19□□□□□ -0.46
PHGDH-206ENST00000493622 CPS1P31327 1500 aa12.19□□□□□ -0.46
PHGDH-206ENST00000493622 KNSTRNQ9Y448 316 aa12.18□□□□□ -0.46
PHGDH-206ENST00000493622 NLRP1Q9C000 1473 aa12.18□□□□□ -0.46
PHGDH-206ENST00000493622 KIF20BQ96Q89 1820 aa12.17□□□□□ -0.46
PHGDH-206ENST00000493622 PPP2R1AP30153 589 aa12.17□□□□□ -0.46
PHGDH-206ENST00000493622 TECPR2O15040 1411 aa12.17□□□□□ -0.46
PHGDH-206ENST00000493622 NSD3Q9BZ95 1437 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 223.4 ms