RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 IQGAP3Q86VI3 1631 aa24.83■■□□□ 1.57
PDLIM2-217ENST00000491330 LRRC7Q96NW7 1537 aa24.83■■□□□ 1.57
PDLIM2-217ENST00000491330 PLEKHG1Q9ULL1 1385 aa24.81■■□□□ 1.56
PDLIM2-217ENST00000491330 ZNF326Q5BKZ1 582 aaKnown RBP24.81■■□□□ 1.56
PDLIM2-217ENST00000491330 TBX22Q9Y458 520 aa24.8■■□□□ 1.56
PDLIM2-217ENST00000491330 ACIN1Q9UKV3 1341 aaKnown RBP24.79■■□□□ 1.56
PDLIM2-217ENST00000491330 HSPA1LP34931 641 aa24.78■■□□□ 1.56
PDLIM2-217ENST00000491330 NAIPQ13075 1403 aa24.78■■□□□ 1.56
PDLIM2-217ENST00000491330 SLC4A1APQ9BWU0 796 aaKnown RBP24.75■■□□□ 1.55
PDLIM2-217ENST00000491330 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
PDLIM2-217ENST00000491330 HFM1A2PYH4 1435 aa24.75■■□□□ 1.55
PDLIM2-217ENST00000491330 E9PCH4 1651 aa24.75■■□□□ 1.55
PDLIM2-217ENST00000491330 C14orf37Q86TY3 774 aa24.74■■□□□ 1.55
PDLIM2-217ENST00000491330 TMEM94Q12767 1356 aa24.74■■□□□ 1.55
PDLIM2-217ENST00000491330 ZFYVE9O95405 1425 aa24.74■■□□□ 1.55
PDLIM2-217ENST00000491330 NUTM2DQ5VT03 806 aaPredicted RBP24.73■■□□□ 1.55
PDLIM2-217ENST00000491330 TMEM131LA2VDJ0 1609 aa24.72■■□□□ 1.55
PDLIM2-217ENST00000491330 MSH6P52701 1360 aa24.71■■□□□ 1.55
PDLIM2-217ENST00000491330 NKTRP30414 1462 aaKnown RBP24.7■■□□□ 1.55
PDLIM2-217ENST00000491330 PIK3R4Q99570 1358 aa24.68■■□□□ 1.54
PDLIM2-217ENST00000491330 VGFO15240 615 aaPredicted RBP24.64■■□□□ 1.54
PDLIM2-217ENST00000491330 STRCP1A6NGW2 1772 aa24.64■■□□□ 1.53
PDLIM2-217ENST00000491330 NCOA3Q9Y6Q9 1424 aa24.63■■□□□ 1.53
PDLIM2-217ENST00000491330 PHF23Q9BUL5 403 aaPredicted RBP24.63■■□□□ 1.53
PDLIM2-217ENST00000491330 RBM33Q96EV2 1170 aaKnown RBP24.62■■□□□ 1.53
PDLIM2-217ENST00000491330 FAM135BQ49AJ0 1406 aa24.61■■□□□ 1.53
PDLIM2-217ENST00000491330 ATF3P18847 181 aa24.61■■□□□ 1.53
PDLIM2-217ENST00000491330 AMOTL2Q9Y2J4 779 aa24.61■■□□□ 1.53
PDLIM2-217ENST00000491330 DIP2AQ14689 1571 aa24.61■■□□□ 1.53
PDLIM2-217ENST00000491330 RPGRIP1LQ68CZ1 1315 aa24.61■■□□□ 1.53
PDLIM2-217ENST00000491330 CADPS2Q86UW7 1296 aa24.6■■□□□ 1.53
PDLIM2-217ENST00000491330 SLAIN2Q9P270 581 aa24.6■■□□□ 1.53
PDLIM2-217ENST00000491330 SPHKAPQ2M3C7 1700 aa24.59■■□□□ 1.53
PDLIM2-217ENST00000491330 C19orf44Q9H6X5 657 aa24.58■■□□□ 1.53
PDLIM2-217ENST00000491330 NWD1Q149M9 1564 aa24.58■■□□□ 1.52
PDLIM2-217ENST00000491330 TRPM2O94759 1503 aa24.57■■□□□ 1.52
PDLIM2-217ENST00000491330 ADAMTS13Q76LX8 1427 aa24.57■■□□□ 1.52
PDLIM2-217ENST00000491330 MYO5BQ9ULV0 1848 aa24.55■■□□□ 1.52
PDLIM2-217ENST00000491330 MPHOSPH9Q99550 1183 aa24.54■■□□□ 1.52
PDLIM2-217ENST00000491330 ALKQ9UM73 1620 aa24.51■■□□□ 1.51
PDLIM2-217ENST00000491330 CCDC144AA2RUR9 1427 aa24.51■■□□□ 1.51
PDLIM2-217ENST00000491330 ILDR2Q71H61 639 aa24.49■■□□□ 1.51
PDLIM2-217ENST00000491330 SOCS7O14512 581 aa24.48■■□□□ 1.51
PDLIM2-217ENST00000491330 CHD2O14647 1828 aaKnown RBP24.48■■□□□ 1.51
PDLIM2-217ENST00000491330 SETD5Q9C0A6 1442 aa24.47■■□□□ 1.51
PDLIM2-217ENST00000491330 CLTCL1P53675 1640 aa24.46■■□□□ 1.51
PDLIM2-217ENST00000491330 SETBP1Q9Y6X0 1596 aa24.46■■□□□ 1.51
PDLIM2-217ENST00000491330 FOXD1Q16676 465 aa24.45■■□□□ 1.5
PDLIM2-217ENST00000491330 KIF1BO60333 1816 aa24.45■■□□□ 1.5
PDLIM2-217ENST00000491330 MED1Q15648 1581 aaPredicted RBP24.43■■□□□ 1.5
PDLIM2-217ENST00000491330 XIRP1Q702N8 1843 aaKnown RBP24.43■■□□□ 1.5
PDLIM2-217ENST00000491330 RGL3Q3MIN7 710 aa24.43■■□□□ 1.5
PDLIM2-217ENST00000491330 METP08581 1390 aa24.42■■□□□ 1.5
PDLIM2-217ENST00000491330 NEXMIFQ5QGS0 1516 aa24.41■■□□□ 1.5
PDLIM2-217ENST00000491330 ANKRD30BQ9BXX2 1392 aa24.4■■□□□ 1.5
PDLIM2-217ENST00000491330 DCCP43146 1447 aa24.39■■□□□ 1.5
PDLIM2-217ENST00000491330 PTPRUQ92729 1446 aa24.39■■□□□ 1.5
PDLIM2-217ENST00000491330 ROBO1Q9Y6N7 1651 aa24.37■■□□□ 1.49
PDLIM2-217ENST00000491330 JCADQ9P266 1359 aa24.37■■□□□ 1.49
PDLIM2-217ENST00000491330 RAB3GAP2Q9H2M9 1393 aa24.33■■□□□ 1.49
PDLIM2-217ENST00000491330 HRCP23327 699 aa24.31■■□□□ 1.48
PDLIM2-217ENST00000491330 NRXN3Q9Y4C0 1643 aa24.31■■□□□ 1.48
PDLIM2-217ENST00000491330 MEX3CQ5U5Q3 659 aaKnown RBP24.3■■□□□ 1.48
PDLIM2-217ENST00000491330 BRINP3Q76B58 766 aa24.3■■□□□ 1.48
PDLIM2-217ENST00000491330 SPATA31A6Q5VVP1 1343 aa24.3■■□□□ 1.48
PDLIM2-217ENST00000491330 ADGRL3Q9HAR2 1447 aa24.29■■□□□ 1.48
PDLIM2-217ENST00000491330 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.29■■□□□ 1.48
PDLIM2-217ENST00000491330 PTCH1Q13635 1447 aa24.28■■□□□ 1.48
PDLIM2-217ENST00000491330 XRN1Q8IZH2 1706 aaKnown RBP24.27■■□□□ 1.48
PDLIM2-217ENST00000491330 LRRC59Q96AG4 307 aaKnown RBP24.27■■□□□ 1.48
PDLIM2-217ENST00000491330 ADGRF5Q8IZF2 1346 aa24.27■■□□□ 1.48
PDLIM2-217ENST00000491330 PHLPP1O60346 1717 aa24.25■■□□□ 1.47
PDLIM2-217ENST00000491330 STK26Q9P289 416 aa24.25■■□□□ 1.47
PDLIM2-217ENST00000491330 SPATA31E1Q6ZUB1 1445 aa24.25■■□□□ 1.47
PDLIM2-217ENST00000491330 STAC3Q96MF2 364 aa24.22■■□□□ 1.47
PDLIM2-217ENST00000491330 MST1RQ04912 1400 aa24.21■■□□□ 1.47
PDLIM2-217ENST00000491330 ROBO2Q9HCK4 1378 aa24.21■■□□□ 1.47
PDLIM2-217ENST00000491330 PPLO60437 1756 aa24.19■■□□□ 1.46
PDLIM2-217ENST00000491330 PRAG1Q86YV5 1406 aa24.18■■□□□ 1.46
PDLIM2-217ENST00000491330 DHX57Q6P158 1386 aaKnown RBP24.18■■□□□ 1.46
PDLIM2-217ENST00000491330 AHDC1Q5TGY3 1603 aaPredicted RBP24.18■■□□□ 1.46
PDLIM2-217ENST00000491330 ZNF772Q68DY9 489 aaPredicted RBP24.18■■□□□ 1.46
PDLIM2-217ENST00000491330 LRPPRCP42704 1394 aaKnown RBP24.17■■□□□ 1.46
PDLIM2-217ENST00000491330 TMEM132EQ6IEE7 984 aa24.17■■□□□ 1.46
PDLIM2-217ENST00000491330 ABCC11Q96J66 1382 aa24.16■■□□□ 1.46
PDLIM2-217ENST00000491330 ASXL1Q8IXJ9 1541 aa24.16■■□□□ 1.46
PDLIM2-217ENST00000491330 NUTM2BA6NNL0 878 aaPredicted RBP24.16■■□□□ 1.46
PDLIM2-217ENST00000491330 NUTM2EB1AL46 878 aaPredicted RBP24.16■■□□□ 1.46
PDLIM2-217ENST00000491330 NUTM2AQ8IVF1 878 aaPredicted RBP24.16■■□□□ 1.46
PDLIM2-217ENST00000491330 C14orf93Q9H972 538 aaKnown RBP24.16■■□□□ 1.46
PDLIM2-217ENST00000491330 SIRT1Q96EB6 747 aa24.15■■□□□ 1.46
PDLIM2-217ENST00000491330 C1orf167Q5SNV9 1468 aa24.14■■□□□ 1.46
PDLIM2-217ENST00000491330 PIK3C2GO75747 1445 aa24.14■■□□□ 1.45
PDLIM2-217ENST00000491330 ESCO1Q5FWF5 840 aa24.14■■□□□ 1.45
PDLIM2-217ENST00000491330 COL16A1Q07092 1604 aaPredicted RBP24.13■■□□□ 1.45
PDLIM2-217ENST00000491330 WAPLQ7Z5K2 1190 aa24.12■■□□□ 1.45
PDLIM2-217ENST00000491330 DCAF11Q8TEB1 546 aa24.12■■□□□ 1.45
PDLIM2-217ENST00000491330 RGS17Q9UGC6 210 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-217ENST00000491330 POGKQ9P215 609 aa24.11■■□□□ 1.45
PDLIM2-217ENST00000491330 KDM2AQ9Y2K7 1162 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms