RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
NELFE-209ENST00000488426 TMEM2Q9UHN6 1383 aa18.18■□□□□ 0.5
NELFE-209ENST00000488426 SLIT1O75093 1534 aa18.17■□□□□ 0.5
NELFE-209ENST00000488426 SCAF11Q99590 1463 aaKnown RBP18.17■□□□□ 0.5
NELFE-209ENST00000488426 IQGAP1P46940 1657 aa18.17■□□□□ 0.5
NELFE-209ENST00000488426 E9PCH4 1651 aa18.16■□□□□ 0.5
NELFE-209ENST00000488426 SLC52A1Q9NWF4 448 aa18.16■□□□□ 0.5
NELFE-209ENST00000488426 L3MBTL2Q969R5 705 aa18.16■□□□□ 0.5
NELFE-209ENST00000488426 STRCP1A6NGW2 1772 aa18.15■□□□□ 0.5
NELFE-209ENST00000488426 UBAP1LF5GYI3 381 aa18.14■□□□□ 0.49
NELFE-209ENST00000488426 EID1Q9Y6B2 187 aa18.14■□□□□ 0.49
NELFE-209ENST00000488426 CCDC144AA2RUR9 1427 aa18.13■□□□□ 0.49
NELFE-209ENST00000488426 IQSEC2Q5JU85 1478 aa18.12■□□□□ 0.49
NELFE-209ENST00000488426 SLC26A8Q96RN1 970 aa18.12■□□□□ 0.49
NELFE-209ENST00000488426 SPHKAPQ2M3C7 1700 aa18.11■□□□□ 0.49
NELFE-209ENST00000488426 CHGAP10645 457 aaKnown RBP18.11■□□□□ 0.49
NELFE-209ENST00000488426 NUTM2DQ5VT03 806 aaPredicted RBP18.11■□□□□ 0.49
NELFE-209ENST00000488426 MYO5BQ9ULV0 1848 aa18.1■□□□□ 0.49
NELFE-209ENST00000488426 ADGRB3O60242 1522 aa18.1■□□□□ 0.49
NELFE-209ENST00000488426 TRPM2O94759 1503 aa18.1■□□□□ 0.49
NELFE-209ENST00000488426 CPS1P31327 1500 aa18.08■□□□□ 0.48
NELFE-209ENST00000488426 KDM5AP29375 1690 aaKnown RBP18.08■□□□□ 0.48
NELFE-209ENST00000488426 TMEM131LA2VDJ0 1609 aa18.07■□□□□ 0.48
NELFE-209ENST00000488426 DIEXFQ68CQ4 756 aaKnown RBP18.07■□□□□ 0.48
NELFE-209ENST00000488426 LRRC7Q96NW7 1537 aa18.06■□□□□ 0.48
NELFE-209ENST00000488426 PIP4K2BP78356 416 aa18.06■□□□□ 0.48
NELFE-209ENST00000488426 ZFYVE9O95405 1425 aa18.06■□□□□ 0.48
NELFE-209ENST00000488426 RBM33Q96EV2 1170 aaKnown RBP18.05■□□□□ 0.48
NELFE-209ENST00000488426 RIMS2Q9UQ26 1411 aa18.04■□□□□ 0.48
NELFE-209ENST00000488426 BCANQ96GW7 911 aa18.03■□□□□ 0.48
NELFE-209ENST00000488426 ALKQ9UM73 1620 aa18.03■□□□□ 0.48
NELFE-209ENST00000488426 SCAF1Q9H7N4 1312 aaKnown RBP18.02■□□□□ 0.48
NELFE-209ENST00000488426 CLTCL1P53675 1640 aa18.01■□□□□ 0.47
NELFE-209ENST00000488426 NBPF8Q3BBV2 869 aa18.01■□□□□ 0.47
NELFE-209ENST00000488426 TOM1O60784 492 aa18■□□□□ 0.47
NELFE-209ENST00000488426 KCNA6P17658 529 aa17.99■□□□□ 0.47
NELFE-209ENST00000488426 SPATA31E1Q6ZUB1 1445 aa17.98■□□□□ 0.47
NELFE-209ENST00000488426 HSPA1LP34931 641 aa17.98■□□□□ 0.47
NELFE-209ENST00000488426 PLEKHG1Q9ULL1 1385 aa17.98■□□□□ 0.47
NELFE-209ENST00000488426 XIRP1Q702N8 1843 aaKnown RBP17.98■□□□□ 0.47
NELFE-209ENST00000488426 RALGAPBQ86X10 1494 aa17.97■□□□□ 0.47
NELFE-209ENST00000488426 HDGFP51858 240 aaKnown RBP17.95■□□□□ 0.46
NELFE-209ENST00000488426 TMEM94Q12767 1356 aa17.95■□□□□ 0.46
NELFE-209ENST00000488426 ADAMTS13Q76LX8 1427 aa17.95■□□□□ 0.46
NELFE-209ENST00000488426 KIF1BO60333 1816 aa17.95■□□□□ 0.46
NELFE-209ENST00000488426 PROSER2Q86WR7 435 aaPredicted RBP17.95■□□□□ 0.46
NELFE-209ENST00000488426 DCAF11Q8TEB1 546 aa17.95■□□□□ 0.46
NELFE-209ENST00000488426 EIF4G2P78344 907 aaKnown RBP eCLIP17.94■□□□□ 0.46
NELFE-209ENST00000488426 ZNF326Q5BKZ1 582 aaKnown RBP17.94■□□□□ 0.46
NELFE-209ENST00000488426 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.94■□□□□ 0.46
NELFE-209ENST00000488426 TBX22Q9Y458 520 aa17.94■□□□□ 0.46
NELFE-209ENST00000488426 PRAG1Q86YV5 1406 aa17.92■□□□□ 0.46
NELFE-209ENST00000488426 STAC3Q96MF2 364 aa17.92■□□□□ 0.46
NELFE-209ENST00000488426 TRPM1Q7Z4N2 1603 aa17.92■□□□□ 0.46
NELFE-209ENST00000488426 RGL3Q3MIN7 710 aa17.91■□□□□ 0.46
NELFE-209ENST00000488426 HSPA5P11021 654 aaKnown RBP17.9■□□□□ 0.46
NELFE-209ENST00000488426 CHD2O14647 1828 aaKnown RBP17.89■□□□□ 0.45
NELFE-209ENST00000488426 KDM2AQ9Y2K7 1162 aa17.89■□□□□ 0.45
NELFE-209ENST00000488426 PTPRUQ92729 1446 aa17.88■□□□□ 0.45
NELFE-209ENST00000488426 LAMC1P11047 1609 aa17.88■□□□□ 0.45
NELFE-209ENST00000488426 DISP3Q9P2K9 1392 aa17.88■□□□□ 0.45
NELFE-209ENST00000488426 NWD1Q149M9 1564 aa17.87■□□□□ 0.45
NELFE-209ENST00000488426 HIRIP3Q9BW71 556 aaPredicted RBP17.86■□□□□ 0.45
NELFE-209ENST00000488426 IFT172Q9UG01 1749 aa17.86■□□□□ 0.45
NELFE-209ENST00000488426 NRXN3Q9Y4C0 1643 aa17.86■□□□□ 0.45
NELFE-209ENST00000488426 ILDR2Q71H61 639 aa17.86■□□□□ 0.45
NELFE-209ENST00000488426 AMOTL2Q9Y2J4 779 aa17.86■□□□□ 0.45
NELFE-209ENST00000488426 NEXMIFQ5QGS0 1516 aa17.85■□□□□ 0.45
NELFE-209ENST00000488426 METP08581 1390 aa17.84■□□□□ 0.45
NELFE-209ENST00000488426 USP47Q96K76 1375 aa17.84■□□□□ 0.45
NELFE-209ENST00000488426 MYOM2P54296 1465 aa17.84■□□□□ 0.45
NELFE-209ENST00000488426 GPRASP1Q5JY77 1395 aa17.84■□□□□ 0.45
NELFE-209ENST00000488426 NKTRP30414 1462 aaKnown RBP17.83■□□□□ 0.45
NELFE-209ENST00000488426 ROCK2O75116 1388 aaKnown RBP17.83■□□□□ 0.45
NELFE-209ENST00000488426 KIAA1210Q9ULL0 1709 aa17.82■□□□□ 0.44
NELFE-209ENST00000488426 CARD11Q9BXL7 1154 aa17.82■□□□□ 0.44
NELFE-209ENST00000488426 SETBP1Q9Y6X0 1596 aa17.8■□□□□ 0.44
NELFE-209ENST00000488426 PPLO60437 1756 aa17.79■□□□□ 0.44
NELFE-209ENST00000488426 SLAIN2Q9P270 581 aa17.79■□□□□ 0.44
NELFE-209ENST00000488426 PIK3R4Q99570 1358 aa17.79■□□□□ 0.44
NELFE-209ENST00000488426 MSH6P52701 1360 aa17.78■□□□□ 0.44
NELFE-209ENST00000488426 DIP2AQ14689 1571 aa17.78■□□□□ 0.44
NELFE-209ENST00000488426 FAM135BQ49AJ0 1406 aa17.77■□□□□ 0.44
NELFE-209ENST00000488426 NRXN1Q9ULB1 1477 aa17.77■□□□□ 0.44
NELFE-209ENST00000488426 DDX10Q13206 875 aaKnown RBP17.77■□□□□ 0.43
NELFE-209ENST00000488426 C14orf37Q86TY3 774 aa17.77■□□□□ 0.43
NELFE-209ENST00000488426 RPGRIP1LQ68CZ1 1315 aa17.77■□□□□ 0.43
NELFE-209ENST00000488426 VGFO15240 615 aaPredicted RBP17.76■□□□□ 0.43
NELFE-209ENST00000488426 WASHC2AQ641Q2 1341 aa17.76■□□□□ 0.43
NELFE-209ENST00000488426 ADGRF5Q8IZF2 1346 aa17.76■□□□□ 0.43
NELFE-209ENST00000488426 MIER1Q8N108 512 aa17.75■□□□□ 0.43
NELFE-209ENST00000488426 CCDC7Q96M83 1385 aa17.75■□□□□ 0.43
NELFE-209ENST00000488426 C19orf44Q9H6X5 657 aa17.75■□□□□ 0.43
NELFE-209ENST00000488426 MYT1Q01538 1121 aa17.74■□□□□ 0.43
NELFE-209ENST00000488426 ROBO1Q9Y6N7 1651 aa17.74■□□□□ 0.43
NELFE-209ENST00000488426 NBPF1Q3BBV0 1214 aa17.73■□□□□ 0.43
NELFE-209ENST00000488426 XRN1Q8IZH2 1706 aaKnown RBP17.73■□□□□ 0.43
NELFE-209ENST00000488426 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.72■□□□□ 0.43
NELFE-209ENST00000488426 NCOA3Q9Y6Q9 1424 aa17.71■□□□□ 0.43
NELFE-209ENST00000488426 SETD1AO15047 1707 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms