RNA–Protein interactions for RNA: ENST00000488196.5

STRADB-209, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-209ENST00000488196 NUTM2DQ5VT03 806 aaPredicted RBP34.85■■■■□ 3.17
STRADB-209ENST00000488196 TRPM2O94759 1503 aa34.85■■■■□ 3.17
STRADB-209ENST00000488196 CLTCL1P53675 1640 aa34.84■■■■□ 3.17
STRADB-209ENST00000488196 PPP1R15AO75807 674 aaPredicted RBP34.84■■■■□ 3.17
STRADB-209ENST00000488196 SLC26A8Q96RN1 970 aa34.84■■■■□ 3.17
STRADB-209ENST00000488196 HDGFP51858 240 aaKnown RBP34.83■■■■□ 3.17
STRADB-209ENST00000488196 FOXD1Q16676 465 aa34.83■■■■□ 3.17
STRADB-209ENST00000488196 BCANQ96GW7 911 aa34.83■■■■□ 3.17
STRADB-209ENST00000488196 MPHOSPH9Q99550 1183 aa34.8■■■■□ 3.16
STRADB-209ENST00000488196 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.79■■■■□ 3.16
STRADB-209ENST00000488196 PLEKHG1Q9ULL1 1385 aa34.78■■■■□ 3.16
STRADB-209ENST00000488196 RAB3GAP2Q9H2M9 1393 aa34.77■■■■□ 3.16
STRADB-209ENST00000488196 ZNF326Q5BKZ1 582 aaKnown RBP34.75■■■■□ 3.15
STRADB-209ENST00000488196 UBAP1LF5GYI3 381 aa34.74■■■■□ 3.15
STRADB-209ENST00000488196 KIF1BO60333 1816 aa34.74■■■■□ 3.15
STRADB-209ENST00000488196 LRRC7Q96NW7 1537 aa34.72■■■■□ 3.15
STRADB-209ENST00000488196 ACIN1Q9UKV3 1341 aaKnown RBP34.69■■■■□ 3.14
STRADB-209ENST00000488196 KCNA6P17658 529 aa34.68■■■■□ 3.14
STRADB-209ENST00000488196 ADAMTS13Q76LX8 1427 aa34.64■■■■□ 3.14
STRADB-209ENST00000488196 TBX22Q9Y458 520 aa34.63■■■■□ 3.13
STRADB-209ENST00000488196 NEXMIFQ5QGS0 1516 aa34.61■■■■□ 3.13
STRADB-209ENST00000488196 XIRP1Q702N8 1843 aaKnown RBP34.6■■■■□ 3.13
STRADB-209ENST00000488196 CHD2O14647 1828 aaKnown RBP34.59■■■■□ 3.13
STRADB-209ENST00000488196 CCDC144AA2RUR9 1427 aa34.58■■■■□ 3.13
STRADB-209ENST00000488196 NWD1Q149M9 1564 aa34.57■■■■□ 3.13
STRADB-209ENST00000488196 TOM1O60784 492 aa34.57■■■■□ 3.12
STRADB-209ENST00000488196 PROSER2Q86WR7 435 aaPredicted RBP34.56■■■■□ 3.12
STRADB-209ENST00000488196 RBM33Q96EV2 1170 aaKnown RBP34.56■■■■□ 3.12
STRADB-209ENST00000488196 DIP2AQ14689 1571 aa34.55■■■■□ 3.12
STRADB-209ENST00000488196 NRXN3Q9Y4C0 1643 aa34.55■■■■□ 3.12
STRADB-209ENST00000488196 TMEM94Q12767 1356 aa34.54■■■■□ 3.12
STRADB-209ENST00000488196 PIP4K2BP78356 416 aa34.54■■■■□ 3.12
STRADB-209ENST00000488196 HRCP23327 699 aa34.53■■■■□ 3.12
STRADB-209ENST00000488196 SCAF1Q9H7N4 1312 aaKnown RBP34.53■■■■□ 3.12
STRADB-209ENST00000488196 ALKQ9UM73 1620 aa34.52■■■■□ 3.12
STRADB-209ENST00000488196 SETBP1Q9Y6X0 1596 aa34.52■■■■□ 3.12
STRADB-209ENST00000488196 NKTRP30414 1462 aaKnown RBP34.52■■■■□ 3.12
STRADB-209ENST00000488196 RPGRIP1LQ68CZ1 1315 aa34.5■■■■□ 3.11
STRADB-209ENST00000488196 RGL3Q3MIN7 710 aa34.49■■■■□ 3.11
STRADB-209ENST00000488196 PPLO60437 1756 aa34.47■■■■□ 3.11
STRADB-209ENST00000488196 VGFO15240 615 aaPredicted RBP34.47■■■■□ 3.11
STRADB-209ENST00000488196 PIK3R4Q99570 1358 aa34.47■■■■□ 3.11
STRADB-209ENST00000488196 SPATA31E1Q6ZUB1 1445 aa34.47■■■■□ 3.11
STRADB-209ENST00000488196 PTPRUQ92729 1446 aa34.45■■■■□ 3.11
STRADB-209ENST00000488196 AMOTL2Q9Y2J4 779 aa34.43■■■■□ 3.1
STRADB-209ENST00000488196 METP08581 1390 aa34.42■■■■□ 3.1
STRADB-209ENST00000488196 ANKRD30BQ9BXX2 1392 aa34.38■■■■□ 3.09
STRADB-209ENST00000488196 ADGRF5Q8IZF2 1346 aa34.35■■■■□ 3.09
STRADB-209ENST00000488196 IFT172Q9UG01 1749 aa34.34■■■■□ 3.09
STRADB-209ENST00000488196 XRN1Q8IZH2 1706 aaKnown RBP34.33■■■■□ 3.09
STRADB-209ENST00000488196 HSPA1LP34931 641 aa34.33■■■■□ 3.09
STRADB-209ENST00000488196 MSH6P52701 1360 aa34.32■■■■□ 3.08
STRADB-209ENST00000488196 SETD1AO15047 1707 aaKnown RBP34.32■■■■□ 3.08
STRADB-209ENST00000488196 C14orf37Q86TY3 774 aa34.3■■■■□ 3.08
STRADB-209ENST00000488196 NCOA3Q9Y6Q9 1424 aa34.28■■■■□ 3.08
STRADB-209ENST00000488196 C19orf44Q9H6X5 657 aa34.21■■■■□ 3.07
STRADB-209ENST00000488196 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.21■■■■□ 3.07
STRADB-209ENST00000488196 SLAIN2Q9P270 581 aa34.19■■■■□ 3.06
STRADB-209ENST00000488196 PIK3C2GO75747 1445 aa34.18■■■■□ 3.06
STRADB-209ENST00000488196 FAM135BQ49AJ0 1406 aa34.18■■■■□ 3.06
STRADB-209ENST00000488196 ROBO1Q9Y6N7 1651 aa34.15■■■■□ 3.06
STRADB-209ENST00000488196 ROBO2Q9HCK4 1378 aa34.14■■■■□ 3.06
STRADB-209ENST00000488196 ATF3P18847 181 aa34.14■■■■□ 3.06
STRADB-209ENST00000488196 MYOM2P54296 1465 aa34.14■■■■□ 3.06
STRADB-209ENST00000488196 CADPS2Q86UW7 1296 aa34.13■■■■□ 3.05
STRADB-209ENST00000488196 TMEM132EQ6IEE7 984 aa34.12■■■■□ 3.05
STRADB-209ENST00000488196 NRXN1Q9ULB1 1477 aa34.12■■■■□ 3.05
STRADB-209ENST00000488196 PTCH1Q13635 1447 aa34.12■■■■□ 3.05
STRADB-209ENST00000488196 TRIM26Q12899 539 aaPredicted RBP34.11■■■■□ 3.05
STRADB-209ENST00000488196 STK26Q9P289 416 aa34.1■■■■□ 3.05
STRADB-209ENST00000488196 KDM2AQ9Y2K7 1162 aa34.1■■■■□ 3.05
STRADB-209ENST00000488196 ASXL1Q8IXJ9 1541 aa34.09■■■■□ 3.05
STRADB-209ENST00000488196 PRAG1Q86YV5 1406 aa34.08■■■■□ 3.05
STRADB-209ENST00000488196 CFAP70Q5T0N1 1121 aa34.08■■■■□ 3.05
STRADB-209ENST00000488196 DCAF11Q8TEB1 546 aa34.08■■■■□ 3.05
STRADB-209ENST00000488196 C14orf93Q9H972 538 aaKnown RBP34.08■■■■□ 3.05
STRADB-209ENST00000488196 ADGRL3Q9HAR2 1447 aa34.07■■■■□ 3.04
STRADB-209ENST00000488196 NALCNQ8IZF0 1738 aa34.07■■■■□ 3.04
STRADB-209ENST00000488196 DCCP43146 1447 aa34.05■■■■□ 3.04
STRADB-209ENST00000488196 LRPPRCP42704 1394 aaKnown RBP34.04■■■■□ 3.04
STRADB-209ENST00000488196 DHX57Q6P158 1386 aaKnown RBP34.04■■■■□ 3.04
STRADB-209ENST00000488196 YTHDC2Q9H6S0 1430 aaKnown RBP34■■■■□ 3.03
STRADB-209ENST00000488196 ABCC11Q96J66 1382 aa33.99■■■■□ 3.03
STRADB-209ENST00000488196 DISP3Q9P2K9 1392 aa33.99■■■■□ 3.03
STRADB-209ENST00000488196 LAMC1P11047 1609 aa33.99■■■■□ 3.03
STRADB-209ENST00000488196 TECPR2O15040 1411 aa33.98■■■■□ 3.03
STRADB-209ENST00000488196 MST1RQ04912 1400 aa33.98■■■■□ 3.03
STRADB-209ENST00000488196 WAPLQ7Z5K2 1190 aa33.98■■■■□ 3.03
STRADB-209ENST00000488196 KNDC1Q76NI1 1749 aa33.96■■■■□ 3.03
STRADB-209ENST00000488196 PHLPP1O60346 1717 aa33.94■■■■□ 3.02
STRADB-209ENST00000488196 BRINP3Q76B58 766 aa33.94■■■■□ 3.02
STRADB-209ENST00000488196 STAC3Q96MF2 364 aa33.94■■■■□ 3.02
STRADB-209ENST00000488196 PLEKHH1Q9ULM0 1364 aa33.93■■■■□ 3.02
STRADB-209ENST00000488196 SIN3AQ96ST3 1273 aa33.91■■■■□ 3.02
STRADB-209ENST00000488196 MED1Q15648 1581 aaPredicted RBP33.89■■■■□ 3.02
STRADB-209ENST00000488196 ADGRB1O14514 1584 aa33.87■■■■□ 3.01
STRADB-209ENST00000488196 C1orf167Q5SNV9 1468 aa33.85■■■■□ 3.01
STRADB-209ENST00000488196 SIRT1Q96EB6 747 aa33.85■■■■□ 3.01
STRADB-209ENST00000488196 COL16A1Q07092 1604 aaPredicted RBP33.84■■■■□ 3.01
STRADB-209ENST00000488196 AHDC1Q5TGY3 1603 aaPredicted RBP33.84■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms