RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 EFCAB2Q5VUJ9 269 aa10.79□□□□□ -0.68
GABRE-209ENST00000486255 KIF3AQ9Y496 699 aa10.79□□□□□ -0.68
GABRE-209ENST00000486255 FAM43AQ8N2R8 423 aa10.78□□□□□ -0.68
GABRE-209ENST00000486255 CDR1P51861 262 aa10.78□□□□□ -0.68
GABRE-209ENST00000486255 HOMER1Q86YM7 354 aa10.78□□□□□ -0.68
GABRE-209ENST00000486255 HSPA5P11021 654 aaKnown RBP10.78□□□□□ -0.68
GABRE-209ENST00000486255 PRG4Q92954 1404 aaPredicted RBP10.78□□□□□ -0.68
GABRE-209ENST00000486255 SLC4A3P48751 1232 aa10.77□□□□□ -0.68
GABRE-209ENST00000486255 GORABQ5T7V8 394 aa10.77□□□□□ -0.69
GABRE-209ENST00000486255 CCDC66A2RUB6 948 aa10.77□□□□□ -0.69
GABRE-209ENST00000486255 KANK1Q14678 1352 aa10.77□□□□□ -0.69
GABRE-209ENST00000486255 HMMRO75330 724 aa10.77□□□□□ -0.69
GABRE-209ENST00000486255 MTERF4Q7Z6M4 381 aaKnown RBP10.76□□□□□ -0.69
GABRE-209ENST00000486255 CCDC191Q8NCU4 936 aa10.76□□□□□ -0.69
GABRE-209ENST00000486255 ATP6V1DQ9Y5K8 247 aa10.76□□□□□ -0.69
GABRE-209ENST00000486255 ZNF608Q9ULD9 1512 aaPredicted RBP10.76□□□□□ -0.69
GABRE-209ENST00000486255 MARCH6O60337 910 aa10.76□□□□□ -0.69
GABRE-209ENST00000486255 EPRSP07814 1512 aaKnown RBP10.76□□□□□ -0.69
GABRE-209ENST00000486255 PCMTD1Q96MG8 357 aaPredicted RBP10.76□□□□□ -0.69
GABRE-209ENST00000486255 FAM161AQ3B820 660 aa10.76□□□□□ -0.69
GABRE-209ENST00000486255 PBRM1Q86U86 1689 aa10.75□□□□□ -0.69
GABRE-209ENST00000486255 OSCARQ8IYS5 282 aa10.75□□□□□ -0.69
GABRE-209ENST00000486255 SMC4Q9NTJ3 1288 aa10.75□□□□□ -0.69
GABRE-209ENST00000486255 FAM184AQ8NB25 1140 aa10.75□□□□□ -0.69
GABRE-209ENST00000486255 RALBP1Q15311 655 aa10.75□□□□□ -0.69
GABRE-209ENST00000486255 FOXD1Q16676 465 aa10.75□□□□□ -0.69
GABRE-209ENST00000486255 VPS53Q5VIR6 699 aa10.74□□□□□ -0.69
GABRE-209ENST00000486255 MNS1Q8NEH6 495 aa10.74□□□□□ -0.69
GABRE-209ENST00000486255 H0YHG0 523 aa10.74□□□□□ -0.69
GABRE-209ENST00000486255 SOX12O15370 315 aa10.74□□□□□ -0.69
GABRE-209ENST00000486255 PDE4AP27815 886 aa10.74□□□□□ -0.69
GABRE-209ENST00000486255 SRPK2P78362 688 aaKnown RBP10.74□□□□□ -0.69
GABRE-209ENST00000486255 FOXD4L6Q3SYB3 417 aaPredicted RBP10.74□□□□□ -0.69
GABRE-209ENST00000486255 FOXD4L3Q6VB84 417 aaPredicted RBP10.74□□□□□ -0.69
GABRE-209ENST00000486255 DCAF11Q8TEB1 546 aa10.74□□□□□ -0.69
GABRE-209ENST00000486255 R3HCC1Q9Y3T6 440 aaKnown RBP10.74□□□□□ -0.69
GABRE-209ENST00000486255 TROQ12816 1431 aaPredicted RBP10.74□□□□□ -0.69
GABRE-209ENST00000486255 MPHOSPH9Q99550 1183 aa10.74□□□□□ -0.69
GABRE-209ENST00000486255 CHMP3Q9Y3E7 222 aa10.73□□□□□ -0.69
GABRE-209ENST00000486255 DCTN1Q14203 1278 aa10.73□□□□□ -0.69
GABRE-209ENST00000486255 HSP90B2PQ58FF3 399 aa10.73□□□□□ -0.69
GABRE-209ENST00000486255 IPO7O95373 1038 aaKnown RBP10.73□□□□□ -0.69
GABRE-209ENST00000486255 FANCIQ9NVI1 1328 aa10.73□□□□□ -0.69
GABRE-209ENST00000486255 UGGT2Q9NYU1 1516 aa10.72□□□□□ -0.69
GABRE-209ENST00000486255 CENPQQ7L2Z9 268 aaPredicted RBP10.72□□□□□ -0.69
GABRE-209ENST00000486255 CCDC39Q9UFE4 941 aa10.72□□□□□ -0.69
GABRE-209ENST00000486255 PLCD4Q9BRC7 762 aa10.72□□□□□ -0.69
GABRE-209ENST00000486255 IFT57Q9NWB7 429 aa10.72□□□□□ -0.69
GABRE-209ENST00000486255 UACAQ9BZF9 1416 aa10.72□□□□□ -0.69
GABRE-209ENST00000486255 DIAPH3Q9NSV4 1193 aa10.72□□□□□ -0.69
GABRE-209ENST00000486255 CENPJQ9HC77 1338 aaPredicted RBP10.71□□□□□ -0.69
GABRE-209ENST00000486255 STK31Q9BXU1 1019 aa10.71□□□□□ -0.69
GABRE-209ENST00000486255 CFAP43Q8NDM7 1665 aa10.71□□□□□ -0.69
GABRE-209ENST00000486255 EIF4G3O43432 1585 aaKnown RBP10.71□□□□□ -0.69
GABRE-209ENST00000486255 ANKRD20A12PQ8NF67 263 aa10.71□□□□□ -0.7
GABRE-209ENST00000486255 CHMP4CQ96CF2 233 aa10.71□□□□□ -0.7
GABRE-209ENST00000486255 MSH5O43196 834 aa10.71□□□□□ -0.7
GABRE-209ENST00000486255 TOMM22Q9NS69 142 aa10.71□□□□□ -0.7
GABRE-209ENST00000486255 U2AF1L5P0DN76 240 aaPredicted RBP10.7□□□□□ -0.7
GABRE-209ENST00000486255 U2AF1Q01081 240 aaKnown RBP eCLIP10.7□□□□□ -0.72e-7■■■□□ 18.8
GABRE-209ENST00000486255 TARBP1Q13395 1621 aaKnown RBP10.7□□□□□ -0.7
GABRE-209ENST00000486255 BCL11BQ9C0K0 894 aaPredicted RBP10.7□□□□□ -0.7
GABRE-209ENST00000486255 HSP90AB3PQ58FF7 597 aa10.7□□□□□ -0.7
GABRE-209ENST00000486255 HDGFL2Q7Z4V5 671 aaPredicted RBP10.7□□□□□ -0.7
GABRE-209ENST00000486255 HDGFP51858 240 aaKnown RBP10.7□□□□□ -0.7
GABRE-209ENST00000486255 MCTP1Q6DN14 999 aa10.7□□□□□ -0.7
GABRE-209ENST00000486255 ERCC4Q92889 916 aaPredicted RBP10.7□□□□□ -0.7
GABRE-209ENST00000486255 WWC1Q8IX03 1113 aa10.69□□□□□ -0.7
GABRE-209ENST00000486255 NUP155O75694 1391 aa10.69□□□□□ -0.7
GABRE-209ENST00000486255 LEKR1Q6ZMV7 388 aa10.69□□□□□ -0.7
GABRE-209ENST00000486255 RILPL2Q969X0 211 aa10.69□□□□□ -0.7
GABRE-209ENST00000486255 HDAC5Q9UQL6 1122 aa10.69□□□□□ -0.7
GABRE-209ENST00000486255 PLEKHH2Q8IVE3 1493 aa10.69□□□□□ -0.7
GABRE-209ENST00000486255 SPAG9O60271 1321 aaKnown RBP10.69□□□□□ -0.7
GABRE-209ENST00000486255 SLC4A10Q6U841 1118 aa10.69□□□□□ -0.7
GABRE-209ENST00000486255 HOOK1Q9UJC3 728 aaKnown RBP10.69□□□□□ -0.7
GABRE-209ENST00000486255 PKD2Q13563 968 aa10.68□□□□□ -0.7
GABRE-209ENST00000486255 SASS6Q6UVJ0 657 aa10.68□□□□□ -0.7
GABRE-209ENST00000486255 CCDC47Q96A33 483 aaKnown RBP10.68□□□□□ -0.7
GABRE-209ENST00000486255 HFM1A2PYH4 1435 aa10.68□□□□□ -0.7
GABRE-209ENST00000486255 HNRNPMP52272 730 aaKnown RBP eCLIP10.68□□□□□ -0.7
GABRE-209ENST00000486255 NAP1L1P55209 391 aaKnown RBP10.68□□□□□ -0.7
GABRE-209ENST00000486255 AKAP17AQ02040 695 aaKnown RBP10.68□□□□□ -0.7
GABRE-209ENST00000486255 CLUAP1Q96AJ1 413 aa10.68□□□□□ -0.7
GABRE-209ENST00000486255 ZNF330Q9Y3S2 320 aaPredicted RBP10.67□□□□□ -0.7
GABRE-209ENST00000486255 CDK13Q14004 1512 aaKnown RBP10.67□□□□□ -0.7
GABRE-209ENST00000486255 CHMP5Q9NZZ3 219 aa10.67□□□□□ -0.7
GABRE-209ENST00000486255 CCDC146Q8IYE0 955 aa10.67□□□□□ -0.7
GABRE-209ENST00000486255 PDE3BQ13370 1112 aa10.67□□□□□ -0.7
GABRE-209ENST00000486255 KIAA0556O60303 1618 aa10.67□□□□□ -0.7
GABRE-209ENST00000486255 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.66□□□□□ -0.7
GABRE-209ENST00000486255 TMX4Q9H1E5 349 aaPredicted RBP10.66□□□□□ -0.7
GABRE-209ENST00000486255 CHMP4AQ9BY43 222 aa10.66□□□□□ -0.7
GABRE-209ENST00000486255 RAPGEF6Q8TEU7 1601 aa10.66□□□□□ -0.7
GABRE-209ENST00000486255 BICD2Q8TD16 824 aa10.66□□□□□ -0.7
GABRE-209ENST00000486255 CAGE1Q8TC20 777 aa10.66□□□□□ -0.7
GABRE-209ENST00000486255 PTPN23Q9H3S7 1636 aa10.66□□□□□ -0.7
GABRE-209ENST00000486255 ROCK2O75116 1388 aaKnown RBP10.66□□□□□ -0.7
GABRE-209ENST00000486255 TRIM29Q14134 588 aa10.66□□□□□ -0.7
GABRE-209ENST00000486255 FBXW7Q969H0 707 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms