RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 SLC26A8Q96RN1 970 aa19.34■□□□□ 0.69
ABCF3-215ENST00000481116 XIRP1Q702N8 1843 aaKnown RBP19.34■□□□□ 0.69
ABCF3-215ENST00000481116 UBAP1LF5GYI3 381 aa19.33■□□□□ 0.68
ABCF3-215ENST00000481116 KIF1BO60333 1816 aa19.32■□□□□ 0.68
ABCF3-215ENST00000481116 BCANQ96GW7 911 aa19.32■□□□□ 0.68
ABCF3-215ENST00000481116 LRRC7Q96NW7 1537 aa19.3■□□□□ 0.68
ABCF3-215ENST00000481116 PPP1R15AO75807 674 aaPredicted RBP19.3■□□□□ 0.68
ABCF3-215ENST00000481116 SLC4A1APQ9BWU0 796 aaKnown RBP19.3■□□□□ 0.68
ABCF3-215ENST00000481116 TRPM2O94759 1503 aa19.3■□□□□ 0.68
ABCF3-215ENST00000481116 FOXD1Q16676 465 aa19.28■□□□□ 0.68
ABCF3-215ENST00000481116 PLEKHG1Q9ULL1 1385 aa19.28■□□□□ 0.68
ABCF3-215ENST00000481116 CHD2O14647 1828 aaKnown RBP19.27■□□□□ 0.68
ABCF3-215ENST00000481116 HDGFP51858 240 aaKnown RBP19.26■□□□□ 0.67
ABCF3-215ENST00000481116 ZNF326Q5BKZ1 582 aaKnown RBP19.25■□□□□ 0.67
ABCF3-215ENST00000481116 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.25■□□□□ 0.67
ABCF3-215ENST00000481116 ALKQ9UM73 1620 aa19.25■□□□□ 0.67
ABCF3-215ENST00000481116 SETD5Q9C0A6 1442 aa19.25■□□□□ 0.67
ABCF3-215ENST00000481116 PIP4K2BP78356 416 aa19.24■□□□□ 0.67
ABCF3-215ENST00000481116 SCAF1Q9H7N4 1312 aaKnown RBP19.23■□□□□ 0.67
ABCF3-215ENST00000481116 KCNA6P17658 529 aa19.22■□□□□ 0.67
ABCF3-215ENST00000481116 RBM33Q96EV2 1170 aaKnown RBP19.22■□□□□ 0.67
ABCF3-215ENST00000481116 NWD1Q149M9 1564 aa19.22■□□□□ 0.67
ABCF3-215ENST00000481116 TOM1O60784 492 aa19.21■□□□□ 0.67
ABCF3-215ENST00000481116 ADAMTS13Q76LX8 1427 aa19.21■□□□□ 0.67
ABCF3-215ENST00000481116 MPHOSPH9Q99550 1183 aa19.21■□□□□ 0.67
ABCF3-215ENST00000481116 NRXN3Q9Y4C0 1643 aa19.21■□□□□ 0.67
ABCF3-215ENST00000481116 NEXMIFQ5QGS0 1516 aa19.2■□□□□ 0.66
ABCF3-215ENST00000481116 RAB3GAP2Q9H2M9 1393 aa19.19■□□□□ 0.66
ABCF3-215ENST00000481116 PROSER2Q86WR7 435 aaPredicted RBP19.18■□□□□ 0.66
ABCF3-215ENST00000481116 TBX22Q9Y458 520 aa19.18■□□□□ 0.66
ABCF3-215ENST00000481116 DIP2AQ14689 1571 aa19.17■□□□□ 0.66
ABCF3-215ENST00000481116 TMEM94Q12767 1356 aa19.17■□□□□ 0.66
ABCF3-215ENST00000481116 PPLO60437 1756 aa19.16■□□□□ 0.66
ABCF3-215ENST00000481116 NKTRP30414 1462 aaKnown RBP19.15■□□□□ 0.66
ABCF3-215ENST00000481116 SETBP1Q9Y6X0 1596 aa19.15■□□□□ 0.66
ABCF3-215ENST00000481116 PTPRUQ92729 1446 aa19.13■□□□□ 0.65
ABCF3-215ENST00000481116 CCDC144AA2RUR9 1427 aa19.11■□□□□ 0.65
ABCF3-215ENST00000481116 HSPA1LP34931 641 aa19.11■□□□□ 0.65
ABCF3-215ENST00000481116 SETD1AO15047 1707 aaKnown RBP19.09■□□□□ 0.65
ABCF3-215ENST00000481116 IFT172Q9UG01 1749 aa19.09■□□□□ 0.65
ABCF3-215ENST00000481116 XRN1Q8IZH2 1706 aaKnown RBP19.08■□□□□ 0.65
ABCF3-215ENST00000481116 METP08581 1390 aa19.08■□□□□ 0.65
ABCF3-215ENST00000481116 RGL3Q3MIN7 710 aa19.08■□□□□ 0.64
ABCF3-215ENST00000481116 AMOTL2Q9Y2J4 779 aa19.08■□□□□ 0.64
ABCF3-215ENST00000481116 PIK3R4Q99570 1358 aa19.07■□□□□ 0.64
ABCF3-215ENST00000481116 ACIN1Q9UKV3 1341 aaKnown RBP19.07■□□□□ 0.64
ABCF3-215ENST00000481116 SPATA31E1Q6ZUB1 1445 aa19.06■□□□□ 0.64
ABCF3-215ENST00000481116 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.05■□□□□ 0.64
ABCF3-215ENST00000481116 RPGRIP1LQ68CZ1 1315 aa19.05■□□□□ 0.64
ABCF3-215ENST00000481116 VGFO15240 615 aaPredicted RBP19.05■□□□□ 0.64
ABCF3-215ENST00000481116 MSH6P52701 1360 aa19.05■□□□□ 0.64
ABCF3-215ENST00000481116 ROBO1Q9Y6N7 1651 aa19.05■□□□□ 0.64
ABCF3-215ENST00000481116 C14orf37Q86TY3 774 aa19.03■□□□□ 0.64
ABCF3-215ENST00000481116 ADGRF5Q8IZF2 1346 aa19.01■□□□□ 0.63
ABCF3-215ENST00000481116 DISP3Q9P2K9 1392 aa18.99■□□□□ 0.63
ABCF3-215ENST00000481116 HRCP23327 699 aa18.99■□□□□ 0.63
ABCF3-215ENST00000481116 NCOA3Q9Y6Q9 1424 aa18.99■□□□□ 0.63
ABCF3-215ENST00000481116 FAM135BQ49AJ0 1406 aa18.98■□□□□ 0.63
ABCF3-215ENST00000481116 NALCNQ8IZF0 1738 aa18.97■□□□□ 0.63
ABCF3-215ENST00000481116 ANKRD30BQ9BXX2 1392 aa18.97■□□□□ 0.63
ABCF3-215ENST00000481116 SLAIN2Q9P270 581 aa18.97■□□□□ 0.63
ABCF3-215ENST00000481116 C19orf44Q9H6X5 657 aa18.96■□□□□ 0.63
ABCF3-215ENST00000481116 PHLPP1O60346 1717 aa18.94■□□□□ 0.62
ABCF3-215ENST00000481116 ATF3P18847 181 aa18.93■□□□□ 0.62
ABCF3-215ENST00000481116 MED1Q15648 1581 aaPredicted RBP18.93■□□□□ 0.62
ABCF3-215ENST00000481116 ROBO2Q9HCK4 1378 aa18.92■□□□□ 0.62
ABCF3-215ENST00000481116 PIK3C2GO75747 1445 aa18.91■□□□□ 0.62
ABCF3-215ENST00000481116 ASXL1Q8IXJ9 1541 aa18.91■□□□□ 0.62
ABCF3-215ENST00000481116 CADPS2Q86UW7 1296 aa18.91■□□□□ 0.62
ABCF3-215ENST00000481116 TMEM132EQ6IEE7 984 aa18.9■□□□□ 0.62
ABCF3-215ENST00000481116 STK26Q9P289 416 aa18.89■□□□□ 0.61
ABCF3-215ENST00000481116 PTCH1Q13635 1447 aa18.89■□□□□ 0.61
ABCF3-215ENST00000481116 ADGRL3Q9HAR2 1447 aa18.89■□□□□ 0.61
ABCF3-215ENST00000481116 DCCP43146 1447 aa18.87■□□□□ 0.61
ABCF3-215ENST00000481116 MYOM2P54296 1465 aa18.87■□□□□ 0.61
ABCF3-215ENST00000481116 KNDC1Q76NI1 1749 aa18.87■□□□□ 0.61
ABCF3-215ENST00000481116 NRXN1Q9ULB1 1477 aa18.87■□□□□ 0.61
ABCF3-215ENST00000481116 KDM2AQ9Y2K7 1162 aa18.87■□□□□ 0.61
ABCF3-215ENST00000481116 MST1RQ04912 1400 aa18.86■□□□□ 0.61
ABCF3-215ENST00000481116 CFAP70Q5T0N1 1121 aa18.86■□□□□ 0.61
ABCF3-215ENST00000481116 ILDR2Q71H61 639 aa18.86■□□□□ 0.61
ABCF3-215ENST00000481116 PRAG1Q86YV5 1406 aa18.85■□□□□ 0.61
ABCF3-215ENST00000481116 LAMC1P11047 1609 aa18.85■□□□□ 0.61
ABCF3-215ENST00000481116 COL16A1Q07092 1604 aaPredicted RBP18.85■□□□□ 0.61
ABCF3-215ENST00000481116 BRINP3Q76B58 766 aa18.84■□□□□ 0.61
ABCF3-215ENST00000481116 WAPLQ7Z5K2 1190 aa18.84■□□□□ 0.61
ABCF3-215ENST00000481116 DCAF11Q8TEB1 546 aa18.84■□□□□ 0.61
ABCF3-215ENST00000481116 C14orf93Q9H972 538 aaKnown RBP18.84■□□□□ 0.61
ABCF3-215ENST00000481116 LRPPRCP42704 1394 aaKnown RBP18.82■□□□□ 0.6
ABCF3-215ENST00000481116 AHDC1Q5TGY3 1603 aaPredicted RBP18.82■□□□□ 0.6
ABCF3-215ENST00000481116 YTHDC2Q9H6S0 1430 aaKnown RBP18.82■□□□□ 0.6
ABCF3-215ENST00000481116 DHX57Q6P158 1386 aaKnown RBP18.81■□□□□ 0.6
ABCF3-215ENST00000481116 PLEKHH1Q9ULM0 1364 aa18.81■□□□□ 0.6
ABCF3-215ENST00000481116 NHSL1Q5SYE7 1610 aa18.81■□□□□ 0.6
ABCF3-215ENST00000481116 TECPR2O15040 1411 aa18.8■□□□□ 0.6
ABCF3-215ENST00000481116 ABCC11Q96J66 1382 aa18.8■□□□□ 0.6
ABCF3-215ENST00000481116 DDX17Q92841 729 aaKnown RBP18.79■□□□□ 0.6
ABCF3-215ENST00000481116 C1orf167Q5SNV9 1468 aa18.78■□□□□ 0.6
ABCF3-215ENST00000481116 RGPD8O14715 1765 aaPredicted RBP18.76■□□□□ 0.59
ABCF3-215ENST00000481116 ORAI2Q96SN7 254 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms