RNA–Protein interactions for RNA: ENST00000479002.1

CAD-208, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 5

Gene CAD, Length 614 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-208ENST00000479002 LTKP29376 864 aa23.45■■□□□ 1.34
CAD-208ENST00000479002 HDGFP51858 240 aaKnown RBP23.45■■□□□ 1.34
CAD-208ENST00000479002 TXNDC2Q86VQ3 553 aa23.45■■□□□ 1.34
CAD-208ENST00000479002 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.44■■□□□ 1.34
CAD-208ENST00000479002 EID1Q9Y6B2 187 aa23.44■■□□□ 1.34
CAD-208ENST00000479002 MYO5BQ9ULV0 1848 aa23.43■■□□□ 1.34
CAD-208ENST00000479002 NCKAP5LQ9HCH0 1330 aa23.42■■□□□ 1.34
CAD-208ENST00000479002 NEXMIFQ5QGS0 1516 aa23.42■■□□□ 1.34
CAD-208ENST00000479002 SCAF11Q99590 1463 aaKnown RBP23.41■■□□□ 1.34
CAD-208ENST00000479002 MED14O60244 1454 aa23.38■■□□□ 1.33
CAD-208ENST00000479002 VGFO15240 615 aaPredicted RBP23.38■■□□□ 1.33
CAD-208ENST00000479002 NUTM2DQ5VT03 806 aaPredicted RBP23.38■■□□□ 1.33
CAD-208ENST00000479002 STAC3Q96MF2 364 aa23.38■■□□□ 1.33
CAD-208ENST00000479002 L3MBTL2Q969R5 705 aa23.37■■□□□ 1.33
CAD-208ENST00000479002 PPP1R15AO75807 674 aaPredicted RBP23.36■■□□□ 1.33
CAD-208ENST00000479002 PLEKHG1Q9ULL1 1385 aa23.36■■□□□ 1.33
CAD-208ENST00000479002 DCAF11Q8TEB1 546 aa23.35■■□□□ 1.33
CAD-208ENST00000479002 STRCQ7RTU9 1775 aa23.35■■□□□ 1.33
CAD-208ENST00000479002 ADGRF5Q8IZF2 1346 aa23.33■■□□□ 1.33
CAD-208ENST00000479002 NPHP4O75161 1426 aaPredicted RBP23.33■■□□□ 1.33
CAD-208ENST00000479002 MYOM2P54296 1465 aa23.33■■□□□ 1.33
CAD-208ENST00000479002 PPLO60437 1756 aa23.32■■□□□ 1.32
CAD-208ENST00000479002 TONSLQ96HA7 1378 aa23.32■■□□□ 1.32
CAD-208ENST00000479002 TIMELESSQ9UNS1 1208 aa23.32■■□□□ 1.32
CAD-208ENST00000479002 IFT172Q9UG01 1749 aa23.31■■□□□ 1.32
CAD-208ENST00000479002 KDM2AQ9Y2K7 1162 aa23.31■■□□□ 1.32
CAD-208ENST00000479002 DMRT2Q9Y5R5 561 aa23.31■■□□□ 1.32
CAD-208ENST00000479002 POLR1AO95602 1720 aaPredicted RBP23.3■■□□□ 1.32
CAD-208ENST00000479002 NRXN1Q9ULB1 1477 aa23.3■■□□□ 1.32
CAD-208ENST00000479002 ADAMTS13Q76LX8 1427 aa23.26■■□□□ 1.31
CAD-208ENST00000479002 TBX22Q9Y458 520 aa23.26■■□□□ 1.31
CAD-208ENST00000479002 SETBP1Q9Y6X0 1596 aa23.26■■□□□ 1.31
CAD-208ENST00000479002 PIK3C2GO75747 1445 aa23.25■■□□□ 1.31
CAD-208ENST00000479002 BCANQ96GW7 911 aa23.25■■□□□ 1.31
CAD-208ENST00000479002 SLC26A8Q96RN1 970 aa23.24■■□□□ 1.31
CAD-208ENST00000479002 SENP3Q9H4L4 574 aaPredicted RBP23.24■■□□□ 1.31
CAD-208ENST00000479002 IQGAP1P46940 1657 aa23.24■■□□□ 1.31
CAD-208ENST00000479002 C14orf93Q9H972 538 aaKnown RBP23.23■■□□□ 1.31
CAD-208ENST00000479002 NRXN3Q9Y4C0 1643 aa23.22■■□□□ 1.31
CAD-208ENST00000479002 PRAG1Q86YV5 1406 aa23.22■■□□□ 1.31
CAD-208ENST00000479002 CFAP70Q5T0N1 1121 aa23.19■■□□□ 1.3
CAD-208ENST00000479002 ALKQ9UM73 1620 aa23.19■■□□□ 1.3
CAD-208ENST00000479002 DIP2AQ14689 1571 aa23.18■■□□□ 1.3
CAD-208ENST00000479002 NBPF8Q3BBV2 869 aa23.18■■□□□ 1.3
CAD-208ENST00000479002 PIK3R4Q99570 1358 aa23.16■■□□□ 1.3
CAD-208ENST00000479002 METP08581 1390 aa23.15■■□□□ 1.3
CAD-208ENST00000479002 SETD1AO15047 1707 aaKnown RBP23.12■■□□□ 1.29
CAD-208ENST00000479002 KCNA6P17658 529 aa23.11■■□□□ 1.29
CAD-208ENST00000479002 TMEM132EQ6IEE7 984 aa23.11■■□□□ 1.29
CAD-208ENST00000479002 LAMC1P11047 1609 aa23.11■■□□□ 1.29
CAD-208ENST00000479002 PTPRUQ92729 1446 aa23.1■■□□□ 1.29
CAD-208ENST00000479002 ZNF335Q9H4Z2 1342 aaPredicted RBP23.09■■□□□ 1.29
CAD-208ENST00000479002 ASXL1Q8IXJ9 1541 aa23.09■■□□□ 1.29
CAD-208ENST00000479002 NBPF1Q3BBV0 1214 aa23.09■■□□□ 1.29
CAD-208ENST00000479002 ADGRB1O14514 1584 aa23.08■■□□□ 1.29
CAD-208ENST00000479002 KIAA1210Q9ULL0 1709 aa23.08■■□□□ 1.28
CAD-208ENST00000479002 AMOTL2Q9Y2J4 779 aa23.07■■□□□ 1.28
CAD-208ENST00000479002 LRPPRCP42704 1394 aaKnown RBP23.06■■□□□ 1.28
CAD-208ENST00000479002 RALGAPBQ86X10 1494 aa23.05■■□□□ 1.28
CAD-208ENST00000479002 TRPM1Q7Z4N2 1603 aa23.04■■□□□ 1.28
CAD-208ENST00000479002 GPRASP1Q5JY77 1395 aa23.04■■□□□ 1.28
CAD-208ENST00000479002 ABCC11Q96J66 1382 aa23.04■■□□□ 1.28
CAD-208ENST00000479002 YTHDC2Q9H6S0 1430 aaKnown RBP23.04■■□□□ 1.28
CAD-208ENST00000479002 NWD1Q149M9 1564 aa23.04■■□□□ 1.28
CAD-208ENST00000479002 CHD2O14647 1828 aaKnown RBP23.03■■□□□ 1.28
CAD-208ENST00000479002 ROCK2O75116 1388 aaKnown RBP23.01■■□□□ 1.27
CAD-208ENST00000479002 TECPR2O15040 1411 aa23.01■■□□□ 1.27
CAD-208ENST00000479002 STK26Q9P289 416 aa23.01■■□□□ 1.27
CAD-208ENST00000479002 LTBP4Q8N2S1 1624 aa23■■□□□ 1.27
CAD-208ENST00000479002 XRN1Q8IZH2 1706 aaKnown RBP23■■□□□ 1.27
CAD-208ENST00000479002 SIRT1Q96EB6 747 aa23■■□□□ 1.27
CAD-208ENST00000479002 NKTRP30414 1462 aaKnown RBP22.99■■□□□ 1.27
CAD-208ENST00000479002 STRCP1A6NGW2 1772 aa22.99■■□□□ 1.27
CAD-208ENST00000479002 CPS1P31327 1500 aa22.98■■□□□ 1.27
CAD-208ENST00000479002 PTCH1Q13635 1447 aa22.98■■□□□ 1.27
CAD-208ENST00000479002 TRAK1Q9UPV9 953 aa22.97■■□□□ 1.27
CAD-208ENST00000479002 ROBO2Q9HCK4 1378 aa22.97■■□□□ 1.27
CAD-208ENST00000479002 ZEB1P37275 1124 aaPredicted RBP22.96■■□□□ 1.27
CAD-208ENST00000479002 PROSER2Q86WR7 435 aaPredicted RBP22.96■■□□□ 1.27
CAD-208ENST00000479002 CARD11Q9BXL7 1154 aa22.96■■□□□ 1.27
CAD-208ENST00000479002 FAM135BQ49AJ0 1406 aa22.95■■□□□ 1.26
CAD-208ENST00000479002 DLC1Q96QB1 1528 aa22.95■■□□□ 1.26
CAD-208ENST00000479002 LRRC7Q96NW7 1537 aa22.94■■□□□ 1.26
CAD-208ENST00000479002 KNDC1Q76NI1 1749 aa22.93■■□□□ 1.26
CAD-208ENST00000479002 NCOA3Q9Y6Q9 1424 aa22.91■■□□□ 1.26
CAD-208ENST00000479002 TMEM94Q12767 1356 aa22.91■■□□□ 1.26
CAD-208ENST00000479002 WAPLQ7Z5K2 1190 aa22.91■■□□□ 1.26
CAD-208ENST00000479002 PRAM1Q96QH2 718 aa22.9■■□□□ 1.26
CAD-208ENST00000479002 PLEKHH1Q9ULM0 1364 aa22.89■■□□□ 1.26
CAD-208ENST00000479002 RBM33Q96EV2 1170 aaKnown RBP22.89■■□□□ 1.25
CAD-208ENST00000479002 POGKQ9P215 609 aa22.87■■□□□ 1.25
CAD-208ENST00000479002 CERKQ8TCT0 537 aa22.85■■□□□ 1.25
CAD-208ENST00000479002 ARHGEF28Q8N1W1 1705 aaKnown RBP22.84■■□□□ 1.25
CAD-208ENST00000479002 EIF3AQ14152 1382 aaKnown RBP22.84■■□□□ 1.25
CAD-208ENST00000479002 CENPJQ9HC77 1338 aaPredicted RBP22.83■■□□□ 1.25
CAD-208ENST00000479002 USP47Q96K76 1375 aa22.83■■□□□ 1.25
CAD-208ENST00000479002 SAFB2Q14151 953 aaKnown RBP eCLIP22.82■■□□□ 1.24
CAD-208ENST00000479002 C19orf44Q9H6X5 657 aa22.82■■□□□ 1.24
CAD-208ENST00000479002 ADGRL3Q9HAR2 1447 aa22.82■■□□□ 1.24
CAD-208ENST00000479002 IQSEC2Q5JU85 1478 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms