RNA–Protein interactions for RNA: ENST00000478509.1

FAM50A-204, Transcript of family with sequence similarity 50 member A, humanhuman

TSL 3

Gene FAM50A, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM50A-204ENST00000478509 LRRC7Q96NW7 1537 aa22.81■■□□□ 1.24
FAM50A-204ENST00000478509 PPP1R15AO75807 674 aaPredicted RBP22.8■■□□□ 1.24
FAM50A-204ENST00000478509 NUTM2DQ5VT03 806 aaPredicted RBP22.8■■□□□ 1.24
FAM50A-204ENST00000478509 SLC26A8Q96RN1 970 aa22.8■■□□□ 1.24
FAM50A-204ENST00000478509 SCAF1Q9H7N4 1312 aaKnown RBP22.8■■□□□ 1.24
FAM50A-204ENST00000478509 XIRP1Q702N8 1843 aaKnown RBP22.78■■□□□ 1.24
FAM50A-204ENST00000478509 CLTCL1P53675 1640 aa22.78■■□□□ 1.24
FAM50A-204ENST00000478509 PIP4K2BP78356 416 aa22.76■■□□□ 1.23
FAM50A-204ENST00000478509 TRPM2O94759 1503 aa22.75■■□□□ 1.23
FAM50A-204ENST00000478509 ALKQ9UM73 1620 aa22.74■■□□□ 1.23
FAM50A-204ENST00000478509 PLEKHG1Q9ULL1 1385 aa22.74■■□□□ 1.23
FAM50A-204ENST00000478509 KIF1BO60333 1816 aa22.73■■□□□ 1.23
FAM50A-204ENST00000478509 TOM1O60784 492 aa22.72■■□□□ 1.23
FAM50A-204ENST00000478509 NWD1Q149M9 1564 aa22.71■■□□□ 1.23
FAM50A-204ENST00000478509 SLC4A1APQ9BWU0 796 aaKnown RBP22.7■■□□□ 1.22
FAM50A-204ENST00000478509 HDGFP51858 240 aaKnown RBP22.69■■□□□ 1.22
FAM50A-204ENST00000478509 ZNF326Q5BKZ1 582 aaKnown RBP22.69■■□□□ 1.22
FAM50A-204ENST00000478509 CHD2O14647 1828 aaKnown RBP22.68■■□□□ 1.22
FAM50A-204ENST00000478509 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.68■■□□□ 1.22
FAM50A-204ENST00000478509 RBM33Q96EV2 1170 aaKnown RBP22.68■■□□□ 1.22
FAM50A-204ENST00000478509 KCNA6P17658 529 aa22.66■■□□□ 1.22
FAM50A-204ENST00000478509 FOXD1Q16676 465 aa22.66■■□□□ 1.22
FAM50A-204ENST00000478509 TMEM94Q12767 1356 aa22.65■■□□□ 1.22
FAM50A-204ENST00000478509 ADAMTS13Q76LX8 1427 aa22.65■■□□□ 1.22
FAM50A-204ENST00000478509 NKTRP30414 1462 aaKnown RBP22.64■■□□□ 1.21
FAM50A-204ENST00000478509 NRXN3Q9Y4C0 1643 aa22.64■■□□□ 1.21
FAM50A-204ENST00000478509 DIP2AQ14689 1571 aa22.63■■□□□ 1.21
FAM50A-204ENST00000478509 NEXMIFQ5QGS0 1516 aa22.63■■□□□ 1.21
FAM50A-204ENST00000478509 PROSER2Q86WR7 435 aaPredicted RBP22.62■■□□□ 1.21
FAM50A-204ENST00000478509 HSPA1LP34931 641 aa22.61■■□□□ 1.21
FAM50A-204ENST00000478509 SETD5Q9C0A6 1442 aa22.59■■□□□ 1.21
FAM50A-204ENST00000478509 TBX22Q9Y458 520 aa22.58■■□□□ 1.21
FAM50A-204ENST00000478509 SETBP1Q9Y6X0 1596 aa22.58■■□□□ 1.2
FAM50A-204ENST00000478509 MPHOSPH9Q99550 1183 aa22.56■■□□□ 1.2
FAM50A-204ENST00000478509 DISP3Q9P2K9 1392 aa22.55■■□□□ 1.2
FAM50A-204ENST00000478509 PPLO60437 1756 aa22.55■■□□□ 1.2
FAM50A-204ENST00000478509 RAB3GAP2Q9H2M9 1393 aa22.54■■□□□ 1.2
FAM50A-204ENST00000478509 PTPRUQ92729 1446 aa22.54■■□□□ 1.2
FAM50A-204ENST00000478509 CCDC144AA2RUR9 1427 aa22.52■■□□□ 1.2
FAM50A-204ENST00000478509 MSH6P52701 1360 aa22.51■■□□□ 1.19
FAM50A-204ENST00000478509 XRN1Q8IZH2 1706 aaKnown RBP22.51■■□□□ 1.19
FAM50A-204ENST00000478509 ROBO1Q9Y6N7 1651 aa22.51■■□□□ 1.19
FAM50A-204ENST00000478509 PIK3R4Q99570 1358 aa22.5■■□□□ 1.19
FAM50A-204ENST00000478509 C14orf37Q86TY3 774 aa22.5■■□□□ 1.19
FAM50A-204ENST00000478509 AMOTL2Q9Y2J4 779 aa22.49■■□□□ 1.19
FAM50A-204ENST00000478509 METP08581 1390 aa22.49■■□□□ 1.19
FAM50A-204ENST00000478509 SETD1AO15047 1707 aaKnown RBP22.48■■□□□ 1.19
FAM50A-204ENST00000478509 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.47■■□□□ 1.19
FAM50A-204ENST00000478509 IFT172Q9UG01 1749 aa22.45■■□□□ 1.19
FAM50A-204ENST00000478509 MED1Q15648 1581 aaPredicted RBP22.45■■□□□ 1.18
FAM50A-204ENST00000478509 RGL3Q3MIN7 710 aa22.44■■□□□ 1.18
FAM50A-204ENST00000478509 SPATA31E1Q6ZUB1 1445 aa22.42■■□□□ 1.18
FAM50A-204ENST00000478509 VGFO15240 615 aaPredicted RBP22.42■■□□□ 1.18
FAM50A-204ENST00000478509 FAM135BQ49AJ0 1406 aa22.41■■□□□ 1.18
FAM50A-204ENST00000478509 RPGRIP1LQ68CZ1 1315 aa22.41■■□□□ 1.18
FAM50A-204ENST00000478509 NALCNQ8IZF0 1738 aa22.39■■□□□ 1.17
FAM50A-204ENST00000478509 NCOA3Q9Y6Q9 1424 aa22.39■■□□□ 1.17
FAM50A-204ENST00000478509 PHLPP1O60346 1717 aa22.38■■□□□ 1.17
FAM50A-204ENST00000478509 SLAIN2Q9P270 581 aa22.38■■□□□ 1.17
FAM50A-204ENST00000478509 ACIN1Q9UKV3 1341 aaKnown RBP22.37■■□□□ 1.17
FAM50A-204ENST00000478509 ADGRF5Q8IZF2 1346 aa22.36■■□□□ 1.17
FAM50A-204ENST00000478509 ATF3P18847 181 aa22.35■■□□□ 1.17
FAM50A-204ENST00000478509 ILDR2Q71H61 639 aa22.35■■□□□ 1.17
FAM50A-204ENST00000478509 C19orf44Q9H6X5 657 aa22.35■■□□□ 1.17
FAM50A-204ENST00000478509 CADPS2Q86UW7 1296 aa22.33■■□□□ 1.17
FAM50A-204ENST00000478509 ANKRD30BQ9BXX2 1392 aa22.32■■□□□ 1.16
FAM50A-204ENST00000478509 PTCH1Q13635 1447 aa22.31■■□□□ 1.16
FAM50A-204ENST00000478509 ROBO2Q9HCK4 1378 aa22.31■■□□□ 1.16
FAM50A-204ENST00000478509 ADGRL3Q9HAR2 1447 aa22.31■■□□□ 1.16
FAM50A-204ENST00000478509 ASXL1Q8IXJ9 1541 aa22.3■■□□□ 1.16
FAM50A-204ENST00000478509 PIK3C2GO75747 1445 aa22.29■■□□□ 1.16
FAM50A-204ENST00000478509 DCCP43146 1447 aa22.29■■□□□ 1.16
FAM50A-204ENST00000478509 COL16A1Q07092 1604 aaPredicted RBP22.28■■□□□ 1.16
FAM50A-204ENST00000478509 MST1RQ04912 1400 aa22.27■■□□□ 1.16
FAM50A-204ENST00000478509 PHF23Q9BUL5 403 aaPredicted RBP22.27■■□□□ 1.16
FAM50A-204ENST00000478509 STK26Q9P289 416 aa22.25■■□□□ 1.15
FAM50A-204ENST00000478509 AHDC1Q5TGY3 1603 aaPredicted RBP22.24■■□□□ 1.15
FAM50A-204ENST00000478509 MYOM2P54296 1465 aa22.24■■□□□ 1.15
FAM50A-204ENST00000478509 KNDC1Q76NI1 1749 aa22.24■■□□□ 1.15
FAM50A-204ENST00000478509 TMEM132EQ6IEE7 984 aa22.23■■□□□ 1.15
FAM50A-204ENST00000478509 BRINP3Q76B58 766 aa22.23■■□□□ 1.15
FAM50A-204ENST00000478509 PRAG1Q86YV5 1406 aa22.23■■□□□ 1.15
FAM50A-204ENST00000478509 HRCP23327 699 aa22.22■■□□□ 1.15
FAM50A-204ENST00000478509 LAMC1P11047 1609 aa22.21■■□□□ 1.15
FAM50A-204ENST00000478509 NRXN1Q9ULB1 1477 aa22.21■■□□□ 1.15
FAM50A-204ENST00000478509 NHSL1Q5SYE7 1610 aa22.2■■□□□ 1.14
FAM50A-204ENST00000478509 LRPPRCP42704 1394 aaKnown RBP22.19■■□□□ 1.14
FAM50A-204ENST00000478509 JCADQ9P266 1359 aa22.18■■□□□ 1.14
FAM50A-204ENST00000478509 TECPR2O15040 1411 aa22.17■■□□□ 1.14
FAM50A-204ENST00000478509 YTHDC2Q9H6S0 1430 aaKnown RBP22.17■■□□□ 1.14
FAM50A-204ENST00000478509 PLEKHH1Q9ULM0 1364 aa22.17■■□□□ 1.14
FAM50A-204ENST00000478509 CFAP70Q5T0N1 1121 aa22.17■■□□□ 1.14
FAM50A-204ENST00000478509 WAPLQ7Z5K2 1190 aa22.17■■□□□ 1.14
FAM50A-204ENST00000478509 DDX17Q92841 729 aaKnown RBP22.17■■□□□ 1.14
FAM50A-204ENST00000478509 C1orf167Q5SNV9 1468 aa22.16■■□□□ 1.14
FAM50A-204ENST00000478509 KDM2AQ9Y2K7 1162 aa22.16■■□□□ 1.14
FAM50A-204ENST00000478509 CDC42BPGQ6DT37 1551 aa22.16■■□□□ 1.14
FAM50A-204ENST00000478509 SHPRHQ149N8 1683 aa22.15■■□□□ 1.14
FAM50A-204ENST00000478509 DCAF11Q8TEB1 546 aa22.14■■□□□ 1.13
FAM50A-204ENST00000478509 C14orf93Q9H972 538 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms