RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 NPATQ14207 1427 aa23.3■■□□□ 1.32
LINC00336-201ENST00000477984 ABCC3O15438 1527 aa23.3■■□□□ 1.32
LINC00336-201ENST00000477984 ADGRB3O60242 1522 aa23.29■■□□□ 1.32
LINC00336-201ENST00000477984 MSH5O43196 834 aa23.29■■□□□ 1.32
LINC00336-201ENST00000477984 IFT172Q9UG01 1749 aa23.28■■□□□ 1.32
LINC00336-201ENST00000477984 FAM69CQ0P6D2 419 aa23.27■■□□□ 1.32
LINC00336-201ENST00000477984 MYBBP1AQ9BQG0 1328 aaKnown RBP23.27■■□□□ 1.32
LINC00336-201ENST00000477984 GGT6Q6P531 493 aa23.27■■□□□ 1.32
LINC00336-201ENST00000477984 SMG6Q86US8 1419 aaKnown RBP23.27■■□□□ 1.32
LINC00336-201ENST00000477984 WASHC2CQ9Y4E1 1318 aa23.26■■□□□ 1.31
LINC00336-201ENST00000477984 MROH2AA6NES4 1674 aa23.26■■□□□ 1.31
LINC00336-201ENST00000477984 PER1O15534 1290 aaPredicted RBP23.26■■□□□ 1.31
LINC00336-201ENST00000477984 BRD4O60885 1362 aaPredicted RBP23.26■■□□□ 1.31
LINC00336-201ENST00000477984 NRXN1Q9ULB1 1477 aa23.26■■□□□ 1.31
LINC00336-201ENST00000477984 PARD3Q8TEW0 1356 aa23.24■■□□□ 1.31
LINC00336-201ENST00000477984 CNGB1Q14028 1251 aaPredicted RBP23.24■■□□□ 1.31
LINC00336-201ENST00000477984 EIF3AQ14152 1382 aaKnown RBP23.23■■□□□ 1.31
LINC00336-201ENST00000477984 IRX6P78412 446 aaPredicted RBP23.23■■□□□ 1.31
LINC00336-201ENST00000477984 CAMSAP1Q5T5Y3 1602 aa23.22■■□□□ 1.31
LINC00336-201ENST00000477984 TMC1Q8TDI8 760 aa23.22■■□□□ 1.31
LINC00336-201ENST00000477984 PNISRQ8TF01 805 aaKnown RBP23.22■■□□□ 1.31
LINC00336-201ENST00000477984 DIP2BQ9P265 1576 aa23.21■■□□□ 1.31
LINC00336-201ENST00000477984 ADGRF5Q8IZF2 1346 aa23.2■■□□□ 1.31
LINC00336-201ENST00000477984 NOS1P29475 1434 aa23.2■■□□□ 1.3
LINC00336-201ENST00000477984 RNF123Q5XPI4 1314 aa23.2■■□□□ 1.3
LINC00336-201ENST00000477984 CDCA8Q53HL2 280 aa23.2■■□□□ 1.3
LINC00336-201ENST00000477984 ARHGAP31Q2M1Z3 1444 aa23.19■■□□□ 1.3
LINC00336-201ENST00000477984 ZMYM4Q5VZL5 1548 aa23.19■■□□□ 1.3
LINC00336-201ENST00000477984 ZC3H13Q5T200 1668 aaKnown RBP23.19■■□□□ 1.3
LINC00336-201ENST00000477984 YEATS2Q9ULM3 1422 aa23.18■■□□□ 1.3
LINC00336-201ENST00000477984 LRPPRCP42704 1394 aaKnown RBP23.18■■□□□ 1.3
LINC00336-201ENST00000477984 PANK3Q9H999 370 aa23.18■■□□□ 1.3
LINC00336-201ENST00000477984 KIF13AQ9H1H9 1805 aa23.18■■□□□ 1.3
LINC00336-201ENST00000477984 CFAP70Q5T0N1 1121 aa23.17■■□□□ 1.3
LINC00336-201ENST00000477984 SLC24A1O60721 1099 aa23.16■■□□□ 1.3
LINC00336-201ENST00000477984 NLRP13Q86W25 1043 aa23.16■■□□□ 1.3
LINC00336-201ENST00000477984 RPGRIP1LQ68CZ1 1315 aa23.16■■□□□ 1.3
LINC00336-201ENST00000477984 SYNMO15061 1565 aa23.14■■□□□ 1.3
LINC00336-201ENST00000477984 SETBP1Q9Y6X0 1596 aa23.14■■□□□ 1.3
LINC00336-201ENST00000477984 PIK3C2BO00750 1634 aa23.14■■□□□ 1.29
LINC00336-201ENST00000477984 PPLO60437 1756 aa23.14■■□□□ 1.29
LINC00336-201ENST00000477984 SIGLEC1Q9BZZ2 1709 aa23.13■■□□□ 1.29
LINC00336-201ENST00000477984 PIK3C2GO75747 1445 aa23.12■■□□□ 1.29
LINC00336-201ENST00000477984 TSPOAP1O95153 1857 aa23.11■■□□□ 1.29
LINC00336-201ENST00000477984 CHGAP10645 457 aaKnown RBP23.11■■□□□ 1.29
LINC00336-201ENST00000477984 NUDCQ9Y266 331 aa23.11■■□□□ 1.29
LINC00336-201ENST00000477984 MYO3AQ8NEV4 1616 aa23.11■■□□□ 1.29
LINC00336-201ENST00000477984 SBNO2Q9Y2G9 1366 aa23.08■■□□□ 1.28
LINC00336-201ENST00000477984 C14orf93Q9H972 538 aaKnown RBP23.07■■□□□ 1.28
LINC00336-201ENST00000477984 KDM5AP29375 1690 aaKnown RBP23.06■■□□□ 1.28
LINC00336-201ENST00000477984 REREQ9P2R6 1566 aa23.06■■□□□ 1.28
LINC00336-201ENST00000477984 CC2D1BQ5T0F9 858 aaKnown RBP23.06■■□□□ 1.28
LINC00336-201ENST00000477984 ERICH6Q7L0X2 663 aa23.06■■□□□ 1.28
LINC00336-201ENST00000477984 BCL11AQ9H165 835 aa23.06■■□□□ 1.28
LINC00336-201ENST00000477984 MYOM1P52179 1685 aa23.06■■□□□ 1.28
LINC00336-201ENST00000477984 ERVK-7P63135 1459 aa23.05■■□□□ 1.28
LINC00336-201ENST00000477984 B4GALNT3Q6L9W6 998 aa23.05■■□□□ 1.28
LINC00336-201ENST00000477984 CFAP65Q6ZU64 1925 aaKnown RBP23.05■■□□□ 1.28
LINC00336-201ENST00000477984 INSRP06213 1382 aa23.04■■□□□ 1.28
LINC00336-201ENST00000477984 ADGRB1O14514 1584 aa23.04■■□□□ 1.28
LINC00336-201ENST00000477984 KNSTRNQ9Y448 316 aa23.03■■□□□ 1.28
LINC00336-201ENST00000477984 NEXMIFQ5QGS0 1516 aa23.03■■□□□ 1.28
LINC00336-201ENST00000477984 SLC52A1Q9NWF4 448 aa23.02■■□□□ 1.28
LINC00336-201ENST00000477984 NPC1L1Q9UHC9 1359 aa23.02■■□□□ 1.28
LINC00336-201ENST00000477984 AGLP35573 1532 aa23.02■■□□□ 1.27
LINC00336-201ENST00000477984 ASXL1Q8IXJ9 1541 aa23.01■■□□□ 1.27
LINC00336-201ENST00000477984 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
LINC00336-201ENST00000477984 PREX1Q8TCU6 1659 aa22.99■■□□□ 1.27
LINC00336-201ENST00000477984 CENPJQ9HC77 1338 aaPredicted RBP22.99■■□□□ 1.27
LINC00336-201ENST00000477984 ZFYVE9O95405 1425 aa22.99■■□□□ 1.27
LINC00336-201ENST00000477984 VGFO15240 615 aaPredicted RBP22.99■■□□□ 1.27
LINC00336-201ENST00000477984 IDI1Q13907 227 aa22.98■■□□□ 1.27
LINC00336-201ENST00000477984 PPP6R1Q9UPN7 881 aa22.97■■□□□ 1.27
LINC00336-201ENST00000477984 BLMP54132 1417 aaPredicted RBP22.93■■□□□ 1.26
LINC00336-201ENST00000477984 TMEM131LA2VDJ0 1609 aa22.93■■□□□ 1.26
LINC00336-201ENST00000477984 TRAK1Q9UPV9 953 aa22.93■■□□□ 1.26
LINC00336-201ENST00000477984 PPP2R1AP30153 589 aa22.92■■□□□ 1.26
LINC00336-201ENST00000477984 QRICH2Q9H0J4 1663 aa22.92■■□□□ 1.26
LINC00336-201ENST00000477984 TMEM132EQ6IEE7 984 aa22.9■■□□□ 1.26
LINC00336-201ENST00000477984 CCDC136Q96JN2 1154 aa22.88■■□□□ 1.25
LINC00336-201ENST00000477984 PDE3BQ13370 1112 aa22.87■■□□□ 1.25
LINC00336-201ENST00000477984 ARHGEF40Q8TER5 1519 aa22.86■■□□□ 1.25
LINC00336-201ENST00000477984 PUS7Q96PZ0 661 aaKnown RBP22.86■■□□□ 1.25
LINC00336-201ENST00000477984 NOP58Q9Y2X3 529 aaKnown RBP22.86■■□□□ 1.25
LINC00336-201ENST00000477984 NUTM2DQ5VT03 806 aaPredicted RBP22.85■■□□□ 1.25
LINC00336-201ENST00000477984 ARHGEF28Q8N1W1 1705 aaKnown RBP22.85■■□□□ 1.25
LINC00336-201ENST00000477984 FBXO31Q5XUX0 539 aaPredicted RBP22.85■■□□□ 1.25
LINC00336-201ENST00000477984 CARD14Q9BXL6 1004 aa22.84■■□□□ 1.25
LINC00336-201ENST00000477984 MYO5BQ9ULV0 1848 aa22.83■■□□□ 1.25
LINC00336-201ENST00000477984 CLTCQ00610 1675 aaKnown RBP22.83■■□□□ 1.24
LINC00336-201ENST00000477984 SENP3-EIF4A1A0A087X0R7 540 aa22.82■■□□□ 1.24
LINC00336-201ENST00000477984 SPATA31D1Q6ZQQ2 1576 aa22.82■■□□□ 1.24
LINC00336-201ENST00000477984 TULP4Q9NRJ4 1543 aa22.78■■□□□ 1.24
LINC00336-201ENST00000477984 EVC2Q86UK5 1308 aa22.78■■□□□ 1.24
LINC00336-201ENST00000477984 ADAMTS8Q9UP79 889 aa22.78■■□□□ 1.24
LINC00336-201ENST00000477984 WDR43Q15061 677 aaKnown RBP eCLIP22.78■■□□□ 1.24
LINC00336-201ENST00000477984 RRP1P56182 461 aaKnown RBP22.77■■□□□ 1.24
LINC00336-201ENST00000477984 ANP32AP39687 249 aaKnown RBP22.76■■□□□ 1.23
LINC00336-201ENST00000477984 IPO9Q96P70 1041 aaKnown RBP22.76■■□□□ 1.23
LINC00336-201ENST00000477984 USP32Q8NFA0 1604 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms