RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 STAC3Q96MF2 364 aa27.82■■■□□ 2.04
TMED4-204ENST00000477639 CLTCL1P53675 1640 aa27.82■■■□□ 2.04
TMED4-204ENST00000477639 ARHGEF40Q8TER5 1519 aa27.82■■■□□ 2.04
TMED4-204ENST00000477639 YEATS2Q9ULM3 1422 aa27.82■■■□□ 2.04
TMED4-204ENST00000477639 B4GALNT3Q6L9W6 998 aa27.8■■■□□ 2.04
TMED4-204ENST00000477639 PANK3Q9H999 370 aa27.8■■■□□ 2.04
TMED4-204ENST00000477639 IQGAP1P46940 1657 aa27.8■■■□□ 2.04
TMED4-204ENST00000477639 KANK1Q14678 1352 aa27.79■■■□□ 2.04
TMED4-204ENST00000477639 SENP3-EIF4A1A0A087X0R7 540 aa27.78■■■□□ 2.04
TMED4-204ENST00000477639 MROH1Q8NDA8 1641 aa27.74■■■□□ 2.03
TMED4-204ENST00000477639 NEURL4Q96JN8 1562 aa27.73■■■□□ 2.03
TMED4-204ENST00000477639 HECW2Q9P2P5 1572 aa27.73■■■□□ 2.03
TMED4-204ENST00000477639 KIF3BO15066 747 aa27.73■■■□□ 2.03
TMED4-204ENST00000477639 INSRP06213 1382 aa27.72■■■□□ 2.03
TMED4-204ENST00000477639 CC2D1BQ5T0F9 858 aaKnown RBP27.72■■■□□ 2.03
TMED4-204ENST00000477639 ANP32EQ9BTT0 268 aa27.72■■■□□ 2.03
TMED4-204ENST00000477639 SCAF11Q99590 1463 aaKnown RBP27.72■■■□□ 2.03
TMED4-204ENST00000477639 MLH3Q9UHC1 1453 aa27.67■■■□□ 2.02
TMED4-204ENST00000477639 SIGLEC1Q9BZZ2 1709 aa27.67■■■□□ 2.02
TMED4-204ENST00000477639 KIAA1210Q9ULL0 1709 aa27.67■■■□□ 2.02
TMED4-204ENST00000477639 PDE3BQ13370 1112 aa27.66■■■□□ 2.02
TMED4-204ENST00000477639 KIDINS220Q9ULH0 1771 aa27.65■■■□□ 2.02
TMED4-204ENST00000477639 FANCIQ9NVI1 1328 aa27.65■■■□□ 2.02
TMED4-204ENST00000477639 ABCA6Q8N139 1617 aa27.65■■■□□ 2.02
TMED4-204ENST00000477639 BLMP54132 1417 aaPredicted RBP27.64■■■□□ 2.02
TMED4-204ENST00000477639 DIP2CQ9Y2E4 1556 aa27.64■■■□□ 2.02
TMED4-204ENST00000477639 CDCA8Q53HL2 280 aa27.62■■■□□ 2.01
TMED4-204ENST00000477639 EFCAB6Q5THR3 1501 aa27.62■■■□□ 2.01
TMED4-204ENST00000477639 MLECQ14165 292 aa27.61■■■□□ 2.01
TMED4-204ENST00000477639 SYNMO15061 1565 aa27.61■■■□□ 2.01
TMED4-204ENST00000477639 MYOM2P54296 1465 aa27.61■■■□□ 2.01
TMED4-204ENST00000477639 LMTK2Q8IWU2 1503 aa27.6■■■□□ 2.01
TMED4-204ENST00000477639 UGGT1Q9NYU2 1555 aa27.59■■■□□ 2.01
TMED4-204ENST00000477639 EIF3AQ14152 1382 aaKnown RBP27.57■■■□□ 2
TMED4-204ENST00000477639 RRP1P56182 461 aaKnown RBP27.57■■■□□ 2
TMED4-204ENST00000477639 AMER1Q5JTC6 1135 aaPredicted RBP27.57■■■□□ 2
TMED4-204ENST00000477639 KNSTRNQ9Y448 316 aa27.57■■■□□ 2
TMED4-204ENST00000477639 SALL2Q9Y467 1007 aaPredicted RBP27.57■■■□□ 2
TMED4-204ENST00000477639 CCDC136Q96JN2 1154 aa27.56■■■□□ 2
TMED4-204ENST00000477639 ADAMTSL3P82987 1691 aa27.55■■■□□ 2
TMED4-204ENST00000477639 MSH5O43196 834 aa27.55■■■□□ 2
TMED4-204ENST00000477639 RCAN3Q9UKA8 241 aa27.55■■■□□ 2
TMED4-204ENST00000477639 KIF1BO60333 1816 aa27.54■■■□□ 2
TMED4-204ENST00000477639 MYOM1P52179 1685 aa27.54■■■□□ 2
TMED4-204ENST00000477639 IFT172Q9UG01 1749 aa27.54■■■□□ 2
TMED4-204ENST00000477639 ADGRF5Q8IZF2 1346 aa27.53■■■□□ 2
TMED4-204ENST00000477639 PPP2R1AP30153 589 aa27.53■■■□□ 2
TMED4-204ENST00000477639 CFAP70Q5T0N1 1121 aa27.52■■■□□ 2
TMED4-204ENST00000477639 NRXN1Q9ULB1 1477 aa27.51■■□□□ 1.99
TMED4-204ENST00000477639 ASXL1Q8IXJ9 1541 aa27.51■■□□□ 1.99
TMED4-204ENST00000477639 CDCA7LQ96GN5 454 aa27.51■■□□□ 1.99
TMED4-204ENST00000477639 NPC1L1Q9UHC9 1359 aa27.5■■□□□ 1.99
TMED4-204ENST00000477639 REREQ9P2R6 1566 aa27.5■■□□□ 1.99
TMED4-204ENST00000477639 MROH2AA6NES4 1674 aa27.49■■□□□ 1.99
TMED4-204ENST00000477639 ADAMTS8Q9UP79 889 aa27.48■■□□□ 1.99
TMED4-204ENST00000477639 KDM5AP29375 1690 aaKnown RBP27.47■■□□□ 1.99
TMED4-204ENST00000477639 SLC24A1O60721 1099 aa27.47■■□□□ 1.99
TMED4-204ENST00000477639 RIMS1Q86UR5 1692 aaKnown RBP27.46■■□□□ 1.99
TMED4-204ENST00000477639 ADGRB3O60242 1522 aa27.46■■□□□ 1.99
TMED4-204ENST00000477639 ERVK-7P63135 1459 aa27.46■■□□□ 1.99
TMED4-204ENST00000477639 PLPPR3Q6T4P5 718 aa27.44■■□□□ 1.98
TMED4-204ENST00000477639 PIK3C2GO75747 1445 aa27.44■■□□□ 1.98
TMED4-204ENST00000477639 FER1L4A9Z1Z3 1794 aa27.43■■□□□ 1.98
TMED4-204ENST00000477639 PTPRMP28827 1452 aa27.43■■□□□ 1.98
TMED4-204ENST00000477639 EXOC6Q8TAG9 804 aa27.42■■□□□ 1.98
TMED4-204ENST00000477639 AGLP35573 1532 aa27.42■■□□□ 1.98
TMED4-204ENST00000477639 MYO3AQ8NEV4 1616 aa27.41■■□□□ 1.98
TMED4-204ENST00000477639 NPATQ14207 1427 aa27.4■■□□□ 1.98
TMED4-204ENST00000477639 NOS1P29475 1434 aa27.39■■□□□ 1.98
TMED4-204ENST00000477639 SETBP1Q9Y6X0 1596 aa27.38■■□□□ 1.97
TMED4-204ENST00000477639 WDR43Q15061 677 aaKnown RBP eCLIP27.38■■□□□ 1.97
TMED4-204ENST00000477639 SBNO2Q9Y2G9 1366 aa27.37■■□□□ 1.97
TMED4-204ENST00000477639 GGT6Q6P531 493 aa27.34■■□□□ 1.97
TMED4-204ENST00000477639 CARD14Q9BXL6 1004 aa27.33■■□□□ 1.97
TMED4-204ENST00000477639 PLEKHH1Q9ULM0 1364 aa27.33■■□□□ 1.97
TMED4-204ENST00000477639 ABCC3O15438 1527 aa27.33■■□□□ 1.97
TMED4-204ENST00000477639 PPLO60437 1756 aa27.33■■□□□ 1.97
TMED4-204ENST00000477639 ZNF521Q96K83 1311 aa27.33■■□□□ 1.97
TMED4-204ENST00000477639 ESF1Q9H501 851 aaKnown RBP27.33■■□□□ 1.97
TMED4-204ENST00000477639 CHGAP10645 457 aaKnown RBP27.31■■□□□ 1.96
TMED4-204ENST00000477639 C14orf93Q9H972 538 aaKnown RBP27.31■■□□□ 1.96
TMED4-204ENST00000477639 RPGRIP1LQ68CZ1 1315 aa27.3■■□□□ 1.96
TMED4-204ENST00000477639 CENPJQ9HC77 1338 aaPredicted RBP27.29■■□□□ 1.96
TMED4-204ENST00000477639 CEBPAP49715 358 aaPredicted RBP27.28■■□□□ 1.96
TMED4-204ENST00000477639 ADGRB1O14514 1584 aa27.27■■□□□ 1.96
TMED4-204ENST00000477639 PLIN1O60240 522 aa27.26■■□□□ 1.95
TMED4-204ENST00000477639 DUSP27Q5VZP5 1158 aa27.26■■□□□ 1.95
TMED4-204ENST00000477639 CAMSAP1Q5T5Y3 1602 aa27.25■■□□□ 1.95
TMED4-204ENST00000477639 CFAP65Q6ZU64 1925 aaKnown RBP27.25■■□□□ 1.95
TMED4-204ENST00000477639 ZC3H13Q5T200 1668 aaKnown RBP27.24■■□□□ 1.95
TMED4-204ENST00000477639 TRAK1Q9UPV9 953 aa27.22■■□□□ 1.95
TMED4-204ENST00000477639 GOLGA2Q08379 1002 aa27.22■■□□□ 1.95
TMED4-204ENST00000477639 PIK3C2BO00750 1634 aa27.21■■□□□ 1.95
TMED4-204ENST00000477639 CRBNQ96SW2 442 aa27.2■■□□□ 1.95
TMED4-204ENST00000477639 CLTCQ00610 1675 aaKnown RBP27.2■■□□□ 1.95
TMED4-204ENST00000477639 QRICH2Q9H0J4 1663 aa27.2■■□□□ 1.94
TMED4-204ENST00000477639 C3P01024 1663 aa27.19■■□□□ 1.94
TMED4-204ENST00000477639 SLFN5Q08AF3 891 aa27.18■■□□□ 1.94
TMED4-204ENST00000477639 TRMT2AQ8IZ69 625 aaKnown RBP27.18■■□□□ 1.94
TMED4-204ENST00000477639 ERICH6Q7L0X2 663 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms