RNA–Protein interactions for RNA: ENST00000477567.5

MMP11-208, Transcript of matrix metallopeptidase 11, humanhuman

TSL 5

Gene MMP11, Length 929 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-208ENST00000477567 TMEM2Q9UHN6 1383 aa22.62■■□□□ 1.21
MMP11-208ENST00000477567 TIMELESSQ9UNS1 1208 aa22.61■■□□□ 1.21
MMP11-208ENST00000477567 RGL3Q3MIN7 710 aa22.59■■□□□ 1.21
MMP11-208ENST00000477567 STAC3Q96MF2 364 aa22.58■■□□□ 1.21
MMP11-208ENST00000477567 RIMS2Q9UQ26 1411 aa22.57■■□□□ 1.2
MMP11-208ENST00000477567 ZNF326Q5BKZ1 582 aaKnown RBP22.57■■□□□ 1.2
MMP11-208ENST00000477567 POLR1AO95602 1720 aaPredicted RBP22.57■■□□□ 1.2
MMP11-208ENST00000477567 TONSLQ96HA7 1378 aa22.56■■□□□ 1.2
MMP11-208ENST00000477567 MYOM2P54296 1465 aa22.55■■□□□ 1.2
MMP11-208ENST00000477567 L3MBTL2Q969R5 705 aa22.55■■□□□ 1.2
MMP11-208ENST00000477567 HDGFP51858 240 aaKnown RBP22.54■■□□□ 1.2
MMP11-208ENST00000477567 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.54■■□□□ 1.2
MMP11-208ENST00000477567 NRXN1Q9ULB1 1477 aa22.53■■□□□ 1.2
MMP11-208ENST00000477567 SCAF11Q99590 1463 aaKnown RBP22.52■■□□□ 1.2
MMP11-208ENST00000477567 STRCQ7RTU9 1775 aa22.51■■□□□ 1.19
MMP11-208ENST00000477567 VGFO15240 615 aaPredicted RBP22.51■■□□□ 1.19
MMP11-208ENST00000477567 LTKP29376 864 aa22.51■■□□□ 1.19
MMP11-208ENST00000477567 DCAF11Q8TEB1 546 aa22.51■■□□□ 1.19
MMP11-208ENST00000477567 HSPA2P54652 639 aa22.5■■□□□ 1.19
MMP11-208ENST00000477567 ANKLE2Q86XL3 938 aa22.5■■□□□ 1.19
MMP11-208ENST00000477567 EID1Q9Y6B2 187 aa22.5■■□□□ 1.19
MMP11-208ENST00000477567 MED14O60244 1454 aa22.49■■□□□ 1.19
MMP11-208ENST00000477567 TXNDC2Q86VQ3 553 aa22.49■■□□□ 1.19
MMP11-208ENST00000477567 PLEKHG1Q9ULL1 1385 aa22.47■■□□□ 1.19
MMP11-208ENST00000477567 ADGRF5Q8IZF2 1346 aa22.46■■□□□ 1.19
MMP11-208ENST00000477567 PIK3C2GO75747 1445 aa22.46■■□□□ 1.19
MMP11-208ENST00000477567 SETBP1Q9Y6X0 1596 aa22.46■■□□□ 1.19
MMP11-208ENST00000477567 NRXN3Q9Y4C0 1643 aa22.46■■□□□ 1.19
MMP11-208ENST00000477567 IQGAP1P46940 1657 aa22.44■■□□□ 1.18
MMP11-208ENST00000477567 NUTM2DQ5VT03 806 aaPredicted RBP22.44■■□□□ 1.18
MMP11-208ENST00000477567 PRAG1Q86YV5 1406 aa22.44■■□□□ 1.18
MMP11-208ENST00000477567 KIAA1210Q9ULL0 1709 aa22.44■■□□□ 1.18
MMP11-208ENST00000477567 KDM2AQ9Y2K7 1162 aa22.44■■□□□ 1.18
MMP11-208ENST00000477567 PPP1R15AO75807 674 aaPredicted RBP22.43■■□□□ 1.18
MMP11-208ENST00000477567 SETD1AO15047 1707 aaKnown RBP22.42■■□□□ 1.18
MMP11-208ENST00000477567 LAMC1P11047 1609 aa22.42■■□□□ 1.18
MMP11-208ENST00000477567 NCKAP5LQ9HCH0 1330 aa22.41■■□□□ 1.18
MMP11-208ENST00000477567 NPHP4O75161 1426 aaPredicted RBP22.4■■□□□ 1.18
MMP11-208ENST00000477567 DIP2AQ14689 1571 aa22.39■■□□□ 1.18
MMP11-208ENST00000477567 ADAMTS13Q76LX8 1427 aa22.39■■□□□ 1.17
MMP11-208ENST00000477567 TRPM1Q7Z4N2 1603 aa22.39■■□□□ 1.17
MMP11-208ENST00000477567 ALKQ9UM73 1620 aa22.39■■□□□ 1.17
MMP11-208ENST00000477567 C14orf93Q9H972 538 aaKnown RBP22.37■■□□□ 1.17
MMP11-208ENST00000477567 NBPF8Q3BBV2 869 aa22.36■■□□□ 1.17
MMP11-208ENST00000477567 ZEB1P37275 1124 aaPredicted RBP22.35■■□□□ 1.17
MMP11-208ENST00000477567 CERKQ8TCT0 537 aa22.34■■□□□ 1.17
MMP11-208ENST00000477567 TBX22Q9Y458 520 aa22.34■■□□□ 1.17
MMP11-208ENST00000477567 DMRT2Q9Y5R5 561 aa22.32■■□□□ 1.16
MMP11-208ENST00000477567 RALGAPBQ86X10 1494 aa22.32■■□□□ 1.16
MMP11-208ENST00000477567 ADGRB1O14514 1584 aa22.31■■□□□ 1.16
MMP11-208ENST00000477567 CFAP70Q5T0N1 1121 aa22.31■■□□□ 1.16
MMP11-208ENST00000477567 CHD2O14647 1828 aaKnown RBP22.31■■□□□ 1.16
MMP11-208ENST00000477567 PIK3R4Q99570 1358 aa22.3■■□□□ 1.16
MMP11-208ENST00000477567 ASXL1Q8IXJ9 1541 aa22.3■■□□□ 1.16
MMP11-208ENST00000477567 BCANQ96GW7 911 aa22.29■■□□□ 1.16
MMP11-208ENST00000477567 SLC26A8Q96RN1 970 aa22.29■■□□□ 1.16
MMP11-208ENST00000477567 GPRASP1Q5JY77 1395 aa22.28■■□□□ 1.16
MMP11-208ENST00000477567 METP08581 1390 aa22.26■■□□□ 1.15
MMP11-208ENST00000477567 SENP3Q9H4L4 574 aaPredicted RBP22.26■■□□□ 1.15
MMP11-208ENST00000477567 DISP3Q9P2K9 1392 aa22.25■■□□□ 1.15
MMP11-208ENST00000477567 NBPF1Q3BBV0 1214 aa22.25■■□□□ 1.15
MMP11-208ENST00000477567 KNDC1Q76NI1 1749 aa22.24■■□□□ 1.15
MMP11-208ENST00000477567 XRN1Q8IZH2 1706 aaKnown RBP22.23■■□□□ 1.15
MMP11-208ENST00000477567 NWD1Q149M9 1564 aa22.23■■□□□ 1.15
MMP11-208ENST00000477567 ROCK2O75116 1388 aaKnown RBP22.23■■□□□ 1.15
MMP11-208ENST00000477567 PTPRUQ92729 1446 aa22.22■■□□□ 1.15
MMP11-208ENST00000477567 TMEM132EQ6IEE7 984 aa22.21■■□□□ 1.15
MMP11-208ENST00000477567 ILDR2Q71H61 639 aa22.21■■□□□ 1.15
MMP11-208ENST00000477567 LRPPRCP42704 1394 aaKnown RBP22.21■■□□□ 1.15
MMP11-208ENST00000477567 YTHDC2Q9H6S0 1430 aaKnown RBP22.21■■□□□ 1.15
MMP11-208ENST00000477567 STRCP1A6NGW2 1772 aa22.2■■□□□ 1.14
MMP11-208ENST00000477567 TECPR2O15040 1411 aa22.2■■□□□ 1.14
MMP11-208ENST00000477567 ABCC11Q96J66 1382 aa22.19■■□□□ 1.14
MMP11-208ENST00000477567 DLC1Q96QB1 1528 aa22.18■■□□□ 1.14
MMP11-208ENST00000477567 ARHGEF28Q8N1W1 1705 aaKnown RBP22.17■■□□□ 1.14
MMP11-208ENST00000477567 CPS1P31327 1500 aa22.17■■□□□ 1.14
MMP11-208ENST00000477567 KCNA6P17658 529 aa22.17■■□□□ 1.14
MMP11-208ENST00000477567 CARD11Q9BXL7 1154 aa22.16■■□□□ 1.14
MMP11-208ENST00000477567 SIRT1Q96EB6 747 aa22.15■■□□□ 1.14
MMP11-208ENST00000477567 AMOTL2Q9Y2J4 779 aa22.15■■□□□ 1.14
MMP11-208ENST00000477567 NKTRP30414 1462 aaKnown RBP22.15■■□□□ 1.14
MMP11-208ENST00000477567 PTCH1Q13635 1447 aa22.14■■□□□ 1.14
MMP11-208ENST00000477567 FAM135BQ49AJ0 1406 aa22.13■■□□□ 1.13
MMP11-208ENST00000477567 ZNF335Q9H4Z2 1342 aaPredicted RBP22.1■■□□□ 1.13
MMP11-208ENST00000477567 SOCS7O14512 581 aa22.1■■□□□ 1.13
MMP11-208ENST00000477567 STK26Q9P289 416 aa22.1■■□□□ 1.13
MMP11-208ENST00000477567 ROBO2Q9HCK4 1378 aa22.1■■□□□ 1.13
MMP11-208ENST00000477567 TRAK1Q9UPV9 953 aa22.09■■□□□ 1.13
MMP11-208ENST00000477567 LTBP4Q8N2S1 1624 aa22.08■■□□□ 1.13
MMP11-208ENST00000477567 USP47Q96K76 1375 aa22.08■■□□□ 1.12
MMP11-208ENST00000477567 XIRP1Q702N8 1843 aaKnown RBP22.07■■□□□ 1.12
MMP11-208ENST00000477567 EIF3AQ14152 1382 aaKnown RBP22.07■■□□□ 1.12
MMP11-208ENST00000477567 NCOA3Q9Y6Q9 1424 aa22.05■■□□□ 1.12
MMP11-208ENST00000477567 QRICH2Q9H0J4 1663 aa22.04■■□□□ 1.12
MMP11-208ENST00000477567 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.03■■□□□ 1.12
MMP11-208ENST00000477567 LRRC7Q96NW7 1537 aa22.03■■□□□ 1.12
MMP11-208ENST00000477567 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
MMP11-208ENST00000477567 PRAM1Q96QH2 718 aa22.03■■□□□ 1.12
MMP11-208ENST00000477567 PLEKHH1Q9ULM0 1364 aa22.02■■□□□ 1.12
MMP11-208ENST00000477567 SBNO2Q9Y2G9 1366 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms